BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2455.p         (431 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775400.1| exopolysaccharide biosynthesis protein [Herb...   342   7e-92
ref|YP_003774100.1| phosphoribosylaminoimidazole-succinocarboxam...   311   1e-82
ref|YP_001354535.1| phosphoribosylaminoimidazole-succinocarboxam...   266   8e-69
ref|YP_001100851.1| phosphoribosylaminoimidazole-succinocarboxam...   265   1e-68
ref|YP_004754432.1| phosphoribosylaminoimidazole-succinocarboxam...   264   2e-68

>ref|YP_003775400.1| exopolysaccharide biosynthesis protein [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ63492.1| exopolysaccharide biosynthesis protein [Herbaspirillum seropedicae
           SmR1]
          Length = 466

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 202/277 (72%), Positives = 231/277 (83%), Gaps = 3/277 (1%)

Query: 1   MNLSQFVLILQAHLRVILLILSITVLVALGISLTQSKQYKATSSVVLNYKASDPVTGLVV 60
           MNLSQF+LIL+AHL++IL I  +TV+ AL +SL   K YKATSSVVLNYKA+DPVTG +V
Sbjct: 1   MNLSQFLLILRAHLKIILAIFGVTVVAALVVSLVLPKTYKATSSVVLNYKATDPVTGTMV 60

Query: 61  APQALPGFMPTQVAIINSPSVALAVVDNLKLAQQPAVKAAFDAQNHGDMDIRNWLAGVLL 120
             QALPG+MPTQV IINS S ALAVVD LKLAQ PAVK ++ A ++  +DIRNWLAG+LL
Sbjct: 61  TAQALPGYMPTQVDIINSRSTALAVVDALKLAQDPAVKESY-ANSNSQLDIRNWLAGILL 119

Query: 121 AKLDAVASKESSVIDITFRADDPQFAALVANAFAAAYQQVSMQLKLDPTRKASSYFNDQT 180
             LDA AS++SSVIDIT++  DPQ  A +ANAFA AYQQVSMQLKLDPTRKAS+YFNDQ 
Sbjct: 120 GNLDAQASRDSSVIDITYKGRDPQTVATMANAFAEAYQQVSMQLKLDPTRKASAYFNDQI 179

Query: 181 KLLRDAYEQAQAKLSKYQEEHGITNLDTRTDVENNRLNDLSTQLVMAQSALAEAQSRSRQ 240
           K+LR+ YEQAQAKLSKYQ+EHGITNLD R DVENNRLNDLSTQLV AQ ALAEAQSR RQ
Sbjct: 180 KVLRENYEQAQAKLSKYQQEHGITNLDNRVDVENNRLNDLSTQLVAAQGALAEAQSR-RQ 238

Query: 241 AKAGGAAESPDVNASGLIQTLKSNLAISEARFEQASK 277
           A AG A  SPDVNA+ L+Q LK+NLA SEARF QA+K
Sbjct: 239 A-AGSAQNSPDVNANPLVQNLKANLAASEARFAQAAK 274


>ref|YP_003774100.1| phosphoribosylaminoimidazole-succinocarboxamide synthase
           [Herbaspirillum seropedicae SmR1]
 emb|CAM32613.1| Phosphoribosylaminoimidazole-succinocarboxamide synthase protein
           [Herbaspirillum seropedicae]
 gb|ADJ62192.1| phosphoribosylaminoimidazole-succinocarboxamide synthase protein
           [Herbaspirillum seropedicae SmR1]
          Length = 298

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 153/162 (94%), Positives = 157/162 (96%)

Query: 270 ARFEQASKLEQPIFTPAAKADLGEHDENISFEETEKRIGTELAHKIRDVAIQLYKEAADY 329
           A  +QASKLEQPIFTPAAKADLGEHDENISFEETEKRIG ELAHKIRDVAIQLYKEAADY
Sbjct: 137 AGLQQASKLEQPIFTPAAKADLGEHDENISFEETEKRIGAELAHKIRDVAIQLYKEAADY 196

Query: 330 AATRGIIIADTKFEFGLDDNGVLHLMDEVLTADSSRFWPADSYQVGISPPSFDKQFVRDY 389
           AATRGIIIADTKFEFGLDDNGVLHLMDEVLTADSSRFWPADSYQVGISPPSFDKQFVRDY
Sbjct: 197 AATRGIIIADTKFEFGLDDNGVLHLMDEVLTADSSRFWPADSYQVGISPPSFDKQFVRDY 256

Query: 390 LETVEGWQKTPPAPALPAEVIEKTGAKYREALERLTGEKLKD 431
           LETV+GW+KTPPAP LPA+VIEKTGAKYREALERLTG KLKD
Sbjct: 257 LETVQGWRKTPPAPPLPADVIEKTGAKYREALERLTGNKLKD 298


>ref|YP_001354535.1| phosphoribosylaminoimidazole-succinocarboxamide synthase
           [Janthinobacterium sp. Marseille]
 gb|ABR88835.1| phosphoribosylaminoimidazole-succinocarboxamide synthase
           [Janthinobacterium sp. Marseille]
          Length = 298

 Score =  266 bits (679), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 145/228 (63%), Positives = 172/228 (75%), Gaps = 8/228 (3%)

Query: 211 DVENNRLNDLSTQLVMAQSALAEAQSRSRQAKAGGAAESPDVNASGLIQT----LKSNLA 266
           D+  N L  ++ + V+A   +A+ ++R+  AK         V    LI +     K+  A
Sbjct: 70  DIVPNHLTGIAPESVVAPDEVAQVKNRAVVAKRLEPILVEAVVRGYLIGSGWNDYKATGA 129

Query: 267 IS----EARFEQASKLEQPIFTPAAKADLGEHDENISFEETEKRIGTELAHKIRDVAIQL 322
           +      A  +QA KL +PIFTPAAKA++GEHDENI+F + E+RIG ELA+KIRDV+I+L
Sbjct: 130 VCGVALPAGLKQAEKLAEPIFTPAAKAEMGEHDENITFADMEQRIGKELANKIRDVSIKL 189

Query: 323 YKEAADYAATRGIIIADTKFEFGLDDNGVLHLMDEVLTADSSRFWPADSYQVGISPPSFD 382
           YK AADYAATRGIIIADTKFEFGLD +G LHLMDEVLTADSSRFWPADSY  GISPPSFD
Sbjct: 190 YKTAADYAATRGIIIADTKFEFGLDKDGTLHLMDEVLTADSSRFWPADSYATGISPPSFD 249

Query: 383 KQFVRDYLETVEGWQKTPPAPALPAEVIEKTGAKYREALERLTGEKLK 430
           KQFVRDYLET+  W+KT PAPALPAEVIEKTGAKYREAL RLTGE+LK
Sbjct: 250 KQFVRDYLETLTEWKKTAPAPALPAEVIEKTGAKYREALTRLTGEELK 297


>ref|YP_001100851.1| phosphoribosylaminoimidazole-succinocarboxamide synthase
           [Herminiimonas arsenicoxydans]
 emb|CAL62730.1| Phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR
           synthetase) [Herminiimonas arsenicoxydans]
          Length = 298

 Score =  265 bits (676), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 131/161 (81%), Positives = 142/161 (88%)

Query: 270 ARFEQASKLEQPIFTPAAKADLGEHDENISFEETEKRIGTELAHKIRDVAIQLYKEAADY 329
           A  +QA KL +PIFTPAAKAD+GEHDENI+F E E+RIG ELA KIRDV+I+LYK AADY
Sbjct: 137 AGLKQAEKLAEPIFTPAAKADMGEHDENITFAEMEQRIGKELAGKIRDVSIKLYKTAADY 196

Query: 330 AATRGIIIADTKFEFGLDDNGVLHLMDEVLTADSSRFWPADSYQVGISPPSFDKQFVRDY 389
           AATRGIIIADTKFEFGLD +G LHLMDEVLTADSSRFWPADSY  GISPPSFDKQFVRDY
Sbjct: 197 AATRGIIIADTKFEFGLDKDGTLHLMDEVLTADSSRFWPADSYATGISPPSFDKQFVRDY 256

Query: 390 LETVEGWQKTPPAPALPAEVIEKTGAKYREALERLTGEKLK 430
           LET+  W+KT PAP LPA+VIEKTGAKYREAL RLTGE LK
Sbjct: 257 LETLTDWKKTAPAPTLPADVIEKTGAKYREALTRLTGEDLK 297


>ref|YP_004754432.1| phosphoribosylaminoimidazole-succinocarboxamide synthase
           [Collimonas fungivorans Ter331]
 gb|AEK63609.1| Phosphoribosylaminoimidazole-succinocarboxamide synthase
           [Collimonas fungivorans Ter331]
          Length = 298

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 131/162 (80%), Positives = 141/162 (87%)

Query: 270 ARFEQASKLEQPIFTPAAKADLGEHDENISFEETEKRIGTELAHKIRDVAIQLYKEAADY 329
           A  +QA+KL +PIFTPAAKA++GEHDENISF + E RIG ELA KIR ++I+LYK AADY
Sbjct: 137 AGLQQAAKLAEPIFTPAAKAEMGEHDENISFADMEARIGKELAEKIRSISIELYKTAADY 196

Query: 330 AATRGIIIADTKFEFGLDDNGVLHLMDEVLTADSSRFWPADSYQVGISPPSFDKQFVRDY 389
           AATRGIIIADTKFEFGLD +GVLHLMDEVLTADSSRFWPA SYQVGISPPSFDKQFVRDY
Sbjct: 197 AATRGIIIADTKFEFGLDQDGVLHLMDEVLTADSSRFWPASSYQVGISPPSFDKQFVRDY 256

Query: 390 LETVEGWQKTPPAPALPAEVIEKTGAKYREALERLTGEKLKD 431
           LETV  W KT PAP LP EVIEKTGAKYREAL  LTGE LKD
Sbjct: 257 LETVTSWNKTAPAPTLPQEVIEKTGAKYREALFSLTGETLKD 298