BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2454.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775399.1| periplasmic polysaccharide export protein [H... 368 e-100 ref|ZP_08273942.1| Capsule polysaccharide export protein [Oxalob... 293 2e-77 ref|YP_001352322.1| polysaccharide export outer membrane protein... 279 4e-73 ref|YP_001099035.1| putative polysaccharide export protein [Herm... 266 2e-69 ref|YP_546134.1| polysaccharide export protein [Methylobacillus ... 263 2e-68 >ref|YP_003775399.1| periplasmic polysaccharide export protein [Herbaspirillum seropedicae SmR1] gb|ADJ63491.1| periplasmic polysaccharide export protein [Herbaspirillum seropedicae SmR1] Length = 264 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 193/264 (73%), Positives = 228/264 (86%), Gaps = 3/264 (1%) Query: 9 MRKIVFLLIGLMLSSVSLL--AQADDILLGPGDVIRVKVYGSDDLSLETRISEAGVISFP 66 MRKI+ +L GL+++ ++ A+A+DI LGPGDVIR+ VYGS DL+LETRISEAGVIS+P Sbjct: 1 MRKILLMLAGLLVAVLAFSGSARAEDIPLGPGDVIRINVYGSQDLTLETRISEAGVISYP 60 Query: 67 LVGEVKIGGLSTAQAETKIAGLLKKGGYLVNPQVNILVTVPQSQMVSVLGQVSKPGRYPL 126 L+GEVKIGG+STAQAE KIAG+LK+GGYLVNPQVNILVT P SQM+SVLGQV KPGRYPL Sbjct: 61 LIGEVKIGGMSTAQAERKIAGMLKQGGYLVNPQVNILVTAPASQMISVLGQVYKPGRYPL 120 Query: 127 DGKRNVADVIALAGGVTPDGGDAVTIVRKNGGAVSKQLVDIYSITHSGDTSELPEVQAND 186 DG+RNVADVIALAGGV PDGGD +TIVR G V++ VDIY+ITH+GDT+ELP V AND Sbjct: 121 DGRRNVADVIALAGGVNPDGGDTITIVRTEDGKVTRTAVDIYAITHNGDTTELPTVGAND 180 Query: 187 VIYVERSLRFYIYGEVQRPGMYKLERGTTLLQALSVGGGLTQRGTERGLVVKRQ-VDGKL 245 V+YVER RFYIYGEVQRPG YKLERGTT+LQAL++GGGLT RGTERGL VKR+ +G+L Sbjct: 181 VVYVERYQRFYIYGEVQRPGAYKLERGTTVLQALTLGGGLTPRGTERGLKVKRRDANGEL 240 Query: 246 EELHLNKDDPLQADDVVYVKESWF 269 +E+ + KDD L DD+VYVKESWF Sbjct: 241 QEISVKKDDLLLPDDIVYVKESWF 264 >ref|ZP_08273942.1| Capsule polysaccharide export protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32583.1| Capsule polysaccharide export protein [Oxalobacteraceae bacterium IMCC9480] Length = 262 Score = 293 bits (750), Expect = 2e-77, Method: Composition-based stats. Identities = 154/262 (58%), Positives = 198/262 (75%), Gaps = 1/262 (0%) Query: 9 MRKIVFLLIGLMLSSVSLLAQADDILLGPGDVIRVKVYGSDDLSLETRISEAGVISFPLV 68 M+KI L+ L ++ A D+LLGPGDVI+V V+G+ DLSLETR+S+ G ISFPL+ Sbjct: 1 MKKIALWLMALTMAFNVNTVVAADVLLGPGDVIKVSVFGNPDLSLETRVSQTGSISFPLI 60 Query: 69 GEVKIGGLSTAQAETKIAGLLKKGGYLVNPQVNILVTVPQSQMVSVLGQVSKPGRYPLDG 128 GEV IGGL+ ++AE KIA +L+ GG+L PQVN+LVTV QSQ VSVLGQV+ PGRYP+DG Sbjct: 61 GEVAIGGLAASEAEKKIASMLETGGFLRKPQVNLLVTVLQSQQVSVLGQVTCPGRYPIDG 120 Query: 129 KRNVADVIALAGGVTPDGGDAVTIVRKNGGAVSKQLVDIYSITHSGDTSELPEVQANDVI 188 R + D++ALAGGV PDGGD VTIVR G +K+ +D+ + SGD ++ E+ +NDV+ Sbjct: 121 TRTLTDILALAGGVGPDGGDIVTIVRTRDGQTTKEAIDLVEMMRSGDFNKNLELTSNDVV 180 Query: 189 YVERSLRFYIYGEVQRPGMYKLERGTTLLQALSVGGGLTQRGTERGLVVKRQ-VDGKLEE 247 YVER+ RFYIYGEVQR G ++LER T+LQALS GGGL+ RGTERG+ +KR+ DGKL E Sbjct: 181 YVERAPRFYIYGEVQRAGFFRLERDMTVLQALSAGGGLSPRGTERGIRIKRRDADGKLSE 240 Query: 248 LHLNKDDPLQADDVVYVKESWF 269 + DD L+ DDVV+VKES F Sbjct: 241 ISAKMDDLLKVDDVVFVKESMF 262 >ref|YP_001352322.1| polysaccharide export outer membrane protein [Janthinobacterium sp. Marseille] gb|ABR89144.1| polysaccharide export outer membrane protein [Janthinobacterium sp. Marseille] Length = 262 Score = 279 bits (713), Expect = 4e-73, Method: Composition-based stats. Identities = 144/262 (54%), Positives = 197/262 (75%), Gaps = 1/262 (0%) Query: 9 MRKIVFLLIGLMLSSVSLLAQADDILLGPGDVIRVKVYGSDDLSLETRISEAGVISFPLV 68 M+KI ++ +++ +V A A D+ LG GDV+++ V+G++DL++ETR+SEAG ISFPLV Sbjct: 1 MKKIRHAMLAILMVTVGSWATAADVPLGAGDVVKITVFGNNDLTVETRVSEAGSISFPLV 60 Query: 69 GEVKIGGLSTAQAETKIAGLLKKGGYLVNPQVNILVTVPQSQMVSVLGQVSKPGRYPLDG 128 GEVK+GGLS+ QAE KIA LL KGG++ NPQVN++VT QSQ VSVLGQV+KPGRYP+DG Sbjct: 61 GEVKVGGLSSNQAEKKIADLLDKGGFIRNPQVNLMVTEMQSQQVSVLGQVNKPGRYPVDG 120 Query: 129 KRNVADVIALAGGVTPDGGDAVTIVRKNGGAVSKQLVDIYSITHSGDTSELPEVQANDVI 188 KR++ DV+A+AGG + D V + + G SK+ +D+ + SGD S+ E+ A D + Sbjct: 121 KRSLTDVLAMAGGANEEAADTVILTHTSDGKTSKETIDLLELVRSGDPSKNRELVAGDQV 180 Query: 189 YVERSLRFYIYGEVQRPGMYKLERGTTLLQALSVGGGLTQRGTERGLVVKRQ-VDGKLEE 247 +VER+ RFYIYGEVQ+PG YKLER +LQALS GGGL+ RGTERG+ +KR+ +G L+ Sbjct: 181 FVERAPRFYIYGEVQKPGSYKLERNMMVLQALSTGGGLSPRGTERGVRIKRRDANGVLQI 240 Query: 248 LHLNKDDPLQADDVVYVKESWF 269 + + DD L+ DD+VYVKES F Sbjct: 241 MTVKHDDLLKPDDIVYVKESLF 262 >ref|YP_001099035.1| putative polysaccharide export protein [Herminiimonas arsenicoxydans] emb|CAL60908.1| putative polysaccharide export protein [Herminiimonas arsenicoxydans] Length = 267 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 139/267 (52%), Positives = 198/267 (74%), Gaps = 6/267 (2%) Query: 9 MRKIVF-----LLIGLMLSSVSLLAQADDILLGPGDVIRVKVYGSDDLSLETRISEAGVI 63 M+KI+ ++ +++ +V A D+ LGPGDV+++ V+G+ DL+LETR+SEAG I Sbjct: 1 MKKIILKNVRQAMLMVLMVTVGSWTYAADVPLGPGDVLKITVFGNPDLTLETRVSEAGSI 60 Query: 64 SFPLVGEVKIGGLSTAQAETKIAGLLKKGGYLVNPQVNILVTVPQSQMVSVLGQVSKPGR 123 S+PLVG+VK+GGLS+ +AE KIA LL KGG++ PQVN++VT QSQ VSVLGQV+KPGR Sbjct: 61 SYPLVGDVKVGGLSSNEAERKIAELLDKGGFVRKPQVNLMVTEMQSQQVSVLGQVNKPGR 120 Query: 124 YPLDGKRNVADVIALAGGVTPDGGDAVTIVRKNGGAVSKQLVDIYSITHSGDTSELPEVQ 183 YP+DGKR++ D++ALAGG + GD V + G SK+++D+ + SGD ++ ++ Sbjct: 121 YPVDGKRSLTDILALAGGANEEAGDTVILTHTQDGKTSKEIIDLLELVRSGDPAKNRQLT 180 Query: 184 ANDVIYVERSLRFYIYGEVQRPGMYKLERGTTLLQALSVGGGLTQRGTERGLVVKRQ-VD 242 A D ++VER+ RFYIYGEVQ+PG YKLER +LQALS GGGL+ RGTERG+ +KR+ + Sbjct: 181 AGDSLFVERAPRFYIYGEVQKPGSYKLERDMMVLQALSSGGGLSPRGTERGVRIKRRDAN 240 Query: 243 GKLEELHLNKDDPLQADDVVYVKESWF 269 G L+ +++ DD L+ +D+VYVKES F Sbjct: 241 GVLQIINVKHDDLLKPNDIVYVKESLF 267 >ref|YP_546134.1| polysaccharide export protein [Methylobacillus flagellatus KT] gb|ABE50293.1| polysaccharide export protein [Methylobacillus flagellatus KT] Length = 270 Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats. Identities = 142/271 (52%), Positives = 197/271 (72%), Gaps = 3/271 (1%) Query: 1 MY-CGVMTMMRKIVFLLIGLMLSSVSLLAQADDILLGPGDVIRVKVYGSDDLSLETRISE 59 MY C MT + K F+ + L + ++ A DI+LGPGDV+R+ V+ DLSLE R+SE Sbjct: 1 MYRCSAMTKLIKW-FVTVVLTIVVFNVNAADSDIVLGPGDVLRISVFEQPDLSLEVRVSE 59 Query: 60 AGVISFPLVGEVKIGGLSTAQAETKIAGLLKKGGYLVNPQVNILVTVPQSQMVSVLGQVS 119 +G I++PL+GEV++GG + A AE KIA +L+ GG+L NP VNI+V QSQ VSVLGQV+ Sbjct: 60 SGTITYPLIGEVRVGGETPAAAERKIASMLESGGFLKNPHVNIIVAQLQSQQVSVLGQVN 119 Query: 120 KPGRYPLDGKRNVADVIALAGGVTPDGGDAVTIVRKNGGAVSKQLVDIYSITHSGDTSEL 179 +PGRYPLD +++ADV+ALAGGV PDGGD +++VRK G ++++D + GD ++ Sbjct: 120 RPGRYPLDSAKSLADVLALAGGVAPDGGDLISLVRKIEGKSVREIIDFAEMMRDGDLNKN 179 Query: 180 PEVQANDVIYVERSLRFYIYGEVQRPGMYKLERGTTLLQALSVGGGLTQRGTERGLVVKR 239 + A D+IYV+R+ RFYIYGEVQRPG Y+LE T+LQAL+VGGGL+ RGTE+G+ VKR Sbjct: 180 ILLTAGDIIYVDRAPRFYIYGEVQRPGQYRLEYHMTVLQALAVGGGLSLRGTEKGIKVKR 239 Query: 240 QVD-GKLEELHLNKDDPLQADDVVYVKESWF 269 D G ++ + + DD +Q +DVVYV+ES F Sbjct: 240 LDDEGGVKIIKVKHDDFIQPNDVVYVQESVF 270