BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2451.p (396 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775396.1| EPS biosynthesis protein [Herbaspirillum ser... 462 e-128 ref|YP_001099033.1| hypothetical protein HEAR0712 [Herminiimonas... 281 1e-73 ref|YP_001352320.1| hypothetical protein mma_0630 [Janthinobacte... 259 6e-67 ref|YP_004753389.1| hypothetical protein CFU_2739 [Collimonas fu... 256 5e-66 ref|ZP_08275880.1| hypothetical protein IMCC9480_1076 [Oxalobact... 250 3e-64 >ref|YP_003775396.1| EPS biosynthesis protein [Herbaspirillum seropedicae SmR1] gb|ADJ63488.1| EPS biosynthesis protein [Herbaspirillum seropedicae SmR1] Length = 411 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 232/394 (58%), Positives = 287/394 (72%), Gaps = 1/394 (0%) Query: 3 ALLVSVTCPLAYAADPGQVVVPYVQYSYLHDDNVLRLSGPDAAVSALGAPKLSDSVQSRT 62 A+L + A A D GQVV PYVQYS L+DDN+LRL P A + LG ++SD+VQS+ Sbjct: 19 AVLAFMAAQQARADDDGQVVTPYVQYSILYDDNLLRLRDPAQAQATLGTTQMSDTVQSKA 78 Query: 63 AGLKLDRELSRQHVTLDASATKNTYDYFSQFDNDARDLKTNWSWFLGERFSGDIGYVYSK 122 G++ DR SRQH+ LDA T+NT+D F QFDND RDL W W LGE SGDIGYVYS+ Sbjct: 79 GGVRFDRMFSRQHIRLDARLTQNTFDNFRQFDNDQRDLNAYWGWVLGEHLSGDIGYVYSQ 138 Query: 123 SLTPFQNFRILGLNIRTMQTKYATLAWQLHPDWTVRSQVSHFGLGYDLNTQQANNFSQNL 182 LTPFQN R+L NIRT QT+YAT AWQLHPDWTVR Q S F LGYDL + Q N+FSQ++ Sbjct: 139 GLTPFQNLRVLEKNIRTAQTRYATAAWQLHPDWTVRGQYSRFSLGYDLPSLQNNSFSQDI 198 Query: 183 AELGLDYNPRSGSVVGVQVRKTDGRYPNDVLVGTESINNSFTQEDYKLKVVWLYSAKTKL 242 E+GLDY RSGS+ G+QVR T G YP LV INNSF+Q++ K +V WLYS KTKL Sbjct: 199 YEMGLDYTARSGSIAGLQVRHTRGNYPEPALVSGALINNSFSQDELKARVSWLYSDKTKL 258 Query: 243 QFLGGLTQRDRKSPTGGGGYRGFNARLVGDWAATGKTGFVANLWREIGGVNDVDANFALT 302 QFLGG +R+R + G + G NARL+ DW AT KT F NL+REIGGV+D+DAN+ALT Sbjct: 259 QFLGGYVRRERDT-GGAANFSGLNARLIADWDATAKTAFTMNLYREIGGVSDIDANYALT 317 Query: 303 TGASLGATYLPTAKLRVEGLVDVERRNYNGASIVTGVTPSSRRDSYEKASLSLTYAPTTS 362 G SL + T K+RV+ +D +RR+YNGA++VTGVTPS R+D+Y+K S + YAP S Sbjct: 318 NGLSLSTRWRATEKIRVDAGIDYQRRDYNGAAVVTGVTPSGRKDTYKKYSFGVIYAPLRS 377 Query: 363 LSILLAVYRESLQSNISNFGYVSNGVSLTSRYEF 396 LS++ A+YRE SNIS FGYVSNG++LT+RYEF Sbjct: 378 LSLMAAIYREDSSSNISGFGYVSNGIALTTRYEF 411 >ref|YP_001099033.1| hypothetical protein HEAR0712 [Herminiimonas arsenicoxydans] emb|CAL60906.1| Conserved hypothetical protein, putative porin [Herminiimonas arsenicoxydans] Length = 401 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 157/401 (39%), Positives = 229/401 (57%), Gaps = 31/401 (7%) Query: 7 SVTCPLAYAADPGQVV---VPYVQYSYLHDDNVLRLSGPDAAVSALGAPKLSDSVQSRTA 63 ++TC AA+ V +PY + +D N+LR P+AA + A LSD Sbjct: 21 ALTCTAVQAAEESAAVDTFIPYATFGAYYDANLLR--QPEAAKQSGAA--LSDRWTRAAI 76 Query: 64 GLKLDRELSRQHVTLDASATKNTYDYFSQFDNDARDLKTNWSWFLGERFSGDIGYVYSKS 123 GL++D+EL RQ +T D SA YD FSQF+ND +DL NW W +G +FSG++G YS+ Sbjct: 77 GLRMDKELGRQRLTADLSAYHAEYDRFSQFNNDGKDLLANWKWVIGNQFSGNVGTSYSEG 136 Query: 124 LTPFQNFRILGLNIRTMQTKYATLAWQLHPDWTVRSQVSHFGLGYDLNTQQANNFSQNLA 183 LTPF ++R +IRT + Y +W+ HP W + + + F L YD Q + + ++A Sbjct: 137 LTPFDDYRSFERSIRTQRKNYVDGSWRFHPSWQLNAAYNRFDLRYDTQAQNPSERNLDMA 196 Query: 184 ELGLDYNPRSGSVVGVQVRKTDGRYPNDVLVGTESINNSFTQEDYKLKVVWLYSAKTKLQ 243 ++G+DY +SG+ +G+ R +GRYP + NS+ Q + K KV W + KT LQ Sbjct: 197 DIGIDYLAKSGNKIGLVARHIEGRYPYADI-------NSYDQNELKAKVDWQLTGKTYLQ 249 Query: 244 FLGGLT--------QRDRKSPTGGGGYRGFNARLVGDWAATGKTGFVANLWREIGGVNDV 295 FLGG QRD P+ ARL W ATGKT F +WRE+G +D+ Sbjct: 250 FLGGWARREYAANPQRDSSVPS---------ARLTAYWKATGKTAFSLGVWRELGATDDL 300 Query: 296 DANFALTTGASLGATYLPTAKLRVEGLVDVERRNYNGASIVTGVTPSSRRDSYEKASLSL 355 AN+A G S+G+T+ T+K+ V+GL+ E+R+YNG +++ G+ PS R D Y A L + Sbjct: 301 AANYARNQGVSVGSTWDATSKISVDGLIMTEKRDYNGVAVMQGIAPSDRDDRYRNAMLGV 360 Query: 356 TYAPTTSLSILLAVYRESLQSNISNFGYVSNGVSLTSRYEF 396 TY PT + +VYR +L SNI+ Y +NGV + +RYEF Sbjct: 361 TYKPTLHWRVRASVYRTTLDSNIAAASYKTNGVQINTRYEF 401 >ref|YP_001352320.1| hypothetical protein mma_0630 [Janthinobacterium sp. Marseille] gb|ABR90958.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 400 Score = 259 bits (661), Expect = 6e-67, Method: Composition-based stats. Identities = 149/395 (37%), Positives = 231/395 (58%), Gaps = 15/395 (3%) Query: 3 ALLVSVTCPLAYAADPGQVVVPYVQYSYLHDDNVLRLSGPDAAVSALGAPKLSDSVQSRT 62 A + +TC A A + G PY Y +D N+LR S AV GA +LSD Sbjct: 20 AFVGVMTCLPALAIE-GDTFTPYASYGIYYDANLLRQSD---AVRQSGA-QLSDRWTRAG 74 Query: 63 AGLKLDRELSRQHVTLDASATKNTYDYFSQFDNDARDLKTNWSWFLGERFSGDIGYVYSK 122 G+++D+E+ RQ +T D SA + YD+F+Q+ N +D NW W LG +FSG++G Y++ Sbjct: 75 VGIRMDKEIGRQKLTADVSAYRADYDHFNQYSNTGKDGVANWKWALGNQFSGNVGVNYAQ 134 Query: 123 SLTPFQNFRILGLNIRTMQTKYATLAWQLHPDWTVRSQVSHFGLGYDLNTQQANNFSQNL 182 +LTPF+++R L +++T Y +W+ HP W + + SH+ L YDL +QQ + + ++ Sbjct: 135 ALTPFEDYRSLERSMQTQTKTYVDGSWRFHPSWQLNTAYSHYDLDYDLASQQPSERTLDI 194 Query: 183 AELGLDYNPRSGSVVGVQVRKTDGRYPNDVLVGTESINNSFTQEDYKLKVVWLYSAKTKL 242 ++G+DY RSG+ VG+ +R +G Y + NS++Q + K KV W + KT + Sbjct: 195 TDVGVDYLARSGNKVGMVLRHIEGDYKYADI-------NSYSQNEVKAKVDWQITGKTLI 247 Query: 243 QFLGGLTQRDRK-SPTGGGGYRGFNARLVGDWAATGKTGFVANLWREIGGVNDVDANFAL 301 QFLGG +R+ +P G +ARL W AT KT WRE+G +++ AN+A Sbjct: 248 QFLGGYAKREYAVNPQRDSGVP--SARLTAYWKATNKTAVSLGAWRELGATDNLAANYAR 305 Query: 302 TTGASLGATYLPTAKLRVEGLVDVERRNYNGASIVTGVTPSSRRDSYEKASLSLTYAPTT 361 G SL +T+ T+K+ V+GLV E+R+YNG S++ G+ P +R D Y A L +TY T+ Sbjct: 306 NQGVSLASTWDATSKISVDGLVMTEKRSYNGVSVIAGLDPLNRSDDYRNALLGVTYKLTS 365 Query: 362 SLSILLAVYRESLQSNISNFGYVSNGVSLTSRYEF 396 I AV+R +L SNI + Y ++G +++RYEF Sbjct: 366 HWRIRAAVFRTTLDSNIPSASYSTDGAHISTRYEF 400 >ref|YP_004753389.1| hypothetical protein CFU_2739 [Collimonas fungivorans Ter331] gb|AEK62566.1| hypothetical protein; putative signal peptide [Collimonas fungivorans Ter331] Length = 434 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 147/388 (37%), Positives = 216/388 (55%), Gaps = 5/388 (1%) Query: 11 PLAYAADPGQVVVPYVQYSYLHDDNVLRLSGPDAAVSALG-APKLSDSVQSRTAGLKLDR 69 P P + PY YS +D N+LRL AA ALG LSD+ Q GL +D+ Sbjct: 50 PADIVQPPADAITPYAGYSVGYDSNLLRLQN-SAAAQALGIGSDLSDTTQRYLFGLAVDK 108 Query: 70 ELSRQHVTLDASATKNTYDYFSQFDNDARDLKTNWSWFLGERFSGDIGYVYSKSLTPFQN 129 LSRQH+T + + TK YD F + D+ ++L NW+W G+ F G++G YS+ LTPF + Sbjct: 109 TLSRQHLTANLNVTKVDYDRFGELDHYDKNLAANWNWHAGDHFEGNVGASYSQGLTPFID 168 Query: 130 FRILGLNIRTMQTKYATLAWQLHPDWTVRSQVSHFGLGYDLNTQQANNFSQNLAELGLDY 189 F +L NIRT + YA +W HP W VR +++ L YDL +QQ + ++N E GLDY Sbjct: 169 FHLLERNIRTEENAYADGSWLFHPSWRVRGGLTYTKLKYDLASQQPLDNTRNQTEAGLDY 228 Query: 190 NPRSGSVVGVQVRKTDGRYPNDVLVGTESINNSFTQEDYKLKVVWLYSAKTKLQFLGGLT 249 SGS +G+Q+R T +PN L + N + Q++ K K+ WL + KT+L FLGG Sbjct: 229 LAASGSTIGLQLRHTHADFPNPELDNGLLVFNGYNQDEVKAKIDWLLTGKTQLHFLGGWV 288 Query: 250 QRDRKSPTGGGGYRGFNARLVGDWAATGKTGFVANLWREIGGVNDVDANFALTTGASLGA 309 R ++ + G N+RL DW+ TGK + WREIG V+D+ ++L GASL + Sbjct: 289 SR-KQDAASVRNFSGVNSRLSADWSPTGKIDVTVSGWREIGAVDDLSTIYSLNRGASLAS 347 Query: 310 TYLPTAKLRVEGLVDVERRNYNGASIVTGVTPS-SRRDSYEKASLSLTYAPTTSLSILLA 368 + + K+R+ V ++R++ G S TG + ++ D +LS+ Y PT + L+ Sbjct: 348 AWQYSEKIRLVAQVKYQKRDF-GPSAGTGTLGNINQNDILRDTALSVVYNPTQRWRVQLS 406 Query: 369 VYRESLQSNISNFGYVSNGVSLTSRYEF 396 R + GYVSNGV+L +RY F Sbjct: 407 GIRSTQTVKSGPGGYVSNGVTLNTRYAF 434 >ref|ZP_08275880.1| hypothetical protein IMCC9480_1076 [Oxalobacteraceae bacterium IMCC9480] gb|EGF30645.1| hypothetical protein IMCC9480_1076 [Oxalobacteraceae bacterium IMCC9480] Length = 404 Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats. Identities = 148/382 (38%), Positives = 215/382 (56%), Gaps = 10/382 (2%) Query: 16 ADPGQVVVPYVQYSYLHDDNVLRLSGPDAAVSALGAPKLSDSVQSRTAGLKLDRELSRQH 75 A PG V PYV HDDN+ RLSGP+ A+ LG LSD+ + GL +D+++S+Q Sbjct: 32 AGPGDVFTPYVGIVVSHDDNLFRLSGPEEALVRLGTSSLSDTYRRLNVGLAIDKQISQQR 91 Query: 76 VTLDASATKNTYDYFSQFDNDARDLKTNWSWFLGERFSGDIGYVYSKSLTPFQNFRILG- 134 +T + + Y+ FSQ DND +DL+ N +W LG G+IG Y +SLTPF N R Sbjct: 92 LTANLGLNRTAYNRFSQLDNDGKDLQVNLNWHLGTHVEGNIGTTYVESLTPFSNLRTTTE 151 Query: 135 LNIRTMQTKYATLAWQLHPDWTVRSQVSHFGLGYDLNTQQANNFSQNLAELGLDYNPRSG 194 N+RT + +A AW+ HP W VR V++ L Y L +Q+ N N +G+DY + Sbjct: 152 RNVRTQKRLFADGAWRFHPSWQVRGSVTNDKLDYALTSQRVFNRDLNTEVVGVDYLSSTK 211 Query: 195 SVVGVQVRKTDGRYPNDVLVGTESINNSFTQEDYKLKVVWLYSAKTKLQFLGGLTQRDRK 254 S VG+Q + Y SINN ++Q + K KV W + K++LQFLGG +R + Sbjct: 212 SSVGIQAGHSAATY-------VSSINN-YSQNELKGKVDWYATGKSRLQFLGGYVER-KH 262 Query: 255 SPTGGGGYRGFNARLVGDWAATGKTGFVANLWREIGGVNDVDANFALTTGASLGATYLPT 314 Y G NARL+ A TGK G AN++REIG ++D+ +++L G SL A + + Sbjct: 263 DGAPERDYSGTNARLIATHALTGKIGLTANVYREIGSIDDLINSYSLNNGVSLEAAWEIS 322 Query: 315 AKLRVEGLVDVERRNYNGASIVTGVTPSSRRDSYEKASLSLTYAPTTSLSILLAVYRESL 374 K R+ + ERR+Y + + G + R D+Y +ASL +YA T S+LL YR+ Sbjct: 323 PKTRLAAQLFNERRSYAPNAALVGQGGADREDTYRRASLIGSYAATRKWSLLLIAYRDQQ 382 Query: 375 QSNISNFGYVSNGVSLTSRYEF 396 SN + Y + G+SL SR++F Sbjct: 383 SSNQTFGNYHATGLSLNSRFDF 404