BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2443.p (342 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775390.1| phenylalanyl-tRNA synthetase subunit alpha [... 666 0.0 ref|YP_001353181.1| phenylalanyl-tRNA synthetase alpha chain [Ja... 632 e-179 ref|YP_001100077.1| phenylalanyl-tRNA synthetase subunit alpha [... 629 e-178 ref|ZP_04578151.1| phenylalanyl-tRNA synthetase subunit alpha [O... 596 e-168 ref|ZP_04575954.1| phenylalanyl-tRNA synthetase subunit alpha [O... 583 e-164 >ref|YP_003775390.1| phenylalanyl-tRNA synthetase subunit alpha [Herbaspirillum seropedicae SmR1] gb|ADJ63482.1| phenylalanyl-tRNA synthetase alpha chain protein [Herbaspirillum seropedicae SmR1] Length = 372 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 341/342 (99%), Positives = 342/342 (100%) Query: 1 MNPLDQLLGQLVTQAQADFAAAPDAAALENAKAKYLGKTGQITEQMKGLGKLAPEERKVQ 60 MNPLDQLLGQLVTQAQADFAAAPDAAALENAKAKYLGKTGQITEQMKGLGKLAPEERKVQ Sbjct: 31 MNPLDQLLGQLVTQAQADFAAAPDAAALENAKAKYLGKTGQITEQMKGLGKLAPEERKVQ 90 Query: 61 GAIINVAKEQIETALTARRDALANAQMQARLNAEAIDVTLPGRGRGVGGIHPVMRSWQRV 120 GAIINVAKEQIETALTARRDALANAQMQARLNAEAIDVTLPGRGRGVGGIHPVMRSWQRV Sbjct: 91 GAIINVAKEQIETALTARRDALANAQMQARLNAEAIDVTLPGRGRGVGGIHPVMRSWQRV 150 Query: 121 EEIFRSIGFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGNDTQGKPLLLRTHT 180 EEIFRSIGFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGND+QGKPLLLRTHT Sbjct: 151 EEIFRSIGFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGNDSQGKPLLLRTHT 210 Query: 181 SPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYLNF 240 SPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYLNF Sbjct: 211 SPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYLNF 270 Query: 241 VKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVVRNMGL 300 VKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVVRNMGL Sbjct: 271 VKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVVRNMGL 330 Query: 301 DPEQYIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 342 DPEQYIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN Sbjct: 331 DPEQYIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 372 >ref|YP_001353181.1| phenylalanyl-tRNA synthetase alpha chain [Janthinobacterium sp. Marseille] sp|A6SY34|SYFA_JANMA RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gb|ABR88313.1| phenylalanyl-tRNA synthetase alpha chain [Janthinobacterium sp. Marseille] Length = 338 Score = 632 bits (1631), Expect = e-179, Method: Composition-based stats. Identities = 317/342 (92%), Positives = 326/342 (95%), Gaps = 4/342 (1%) Query: 1 MNPLDQLLGQLVTQAQADFAAAPDAAALENAKAKYLGKTGQITEQMKGLGKLAPEERKVQ 60 MNPL+QL VTQAQ DFAAA DAAALENAKAKYLGKTGQITEQMK LGKLAPEERK Q Sbjct: 1 MNPLEQL----VTQAQTDFAAAIDAAALENAKAKYLGKTGQITEQMKSLGKLAPEERKAQ 56 Query: 61 GAIINVAKEQIETALTARRDALANAQMQARLNAEAIDVTLPGRGRGVGGIHPVMRSWQRV 120 GA+IN AKE+IE ALTARRDAL+NAQM+ARLNAEAID+TLPGRGRG GGIHPVMRSWQRV Sbjct: 57 GAVINSAKEKIEAALTARRDALSNAQMEARLNAEAIDITLPGRGRGTGGIHPVMRSWQRV 116 Query: 121 EEIFRSIGFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGNDTQGKPLLLRTHT 180 EEIF SIGFDVADGPEIE DWTNFTALNSPENHPARSMQDTFYIEG DTQGKPLLLRTHT Sbjct: 117 EEIFGSIGFDVADGPEIENDWTNFTALNSPENHPARSMQDTFYIEGKDTQGKPLLLRTHT 176 Query: 181 SPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYLNF 240 SPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWI E+ISFADLKGVYLNF Sbjct: 177 SPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIDENISFADLKGVYLNF 236 Query: 241 VKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVVRNMGL 300 VKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTV+RNMG Sbjct: 237 VKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVLRNMGF 296 Query: 301 DPEQYIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 342 DPEQ+IGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN Sbjct: 297 DPEQFIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 338 >ref|YP_001100077.1| phenylalanyl-tRNA synthetase subunit alpha [Herminiimonas arsenicoxydans] sp|A4G615|SYFA_HERAR RecName: Full=Phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS emb|CAL61952.1| Phenylalanyl-tRNA synthetase alpha chain (Phenylalanine--tRNA ligase alpha chain) (PheRS) [Herminiimonas arsenicoxydans] Length = 338 Score = 629 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 313/342 (91%), Positives = 325/342 (95%), Gaps = 4/342 (1%) Query: 1 MNPLDQLLGQLVTQAQADFAAAPDAAALENAKAKYLGKTGQITEQMKGLGKLAPEERKVQ 60 MNPLDQL V QAQ DFAAA DAAALENAKAKYLGKTGQITEQMK LGKLAP+ERK Q Sbjct: 1 MNPLDQL----VIQAQTDFAAADDAAALENAKAKYLGKTGQITEQMKSLGKLAPDERKTQ 56 Query: 61 GAIINVAKEQIETALTARRDALANAQMQARLNAEAIDVTLPGRGRGVGGIHPVMRSWQRV 120 GA+IN AKE+IE ALTARRDAL+NAQM++RLNAEAID+TLPGRGRG GGIHPVMR+WQRV Sbjct: 57 GAVINSAKEKIEAALTARRDALSNAQMESRLNAEAIDITLPGRGRGTGGIHPVMRTWQRV 116 Query: 121 EEIFRSIGFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGNDTQGKPLLLRTHT 180 EEIF SIGFDVADGPEIE DWTNFTALNSPENHPARSMQDTFYIEGNDTQGKPLLLRTHT Sbjct: 117 EEIFGSIGFDVADGPEIENDWTNFTALNSPENHPARSMQDTFYIEGNDTQGKPLLLRTHT 176 Query: 181 SPMQVRYARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYLNF 240 SPMQVRYARMNKPPI+VIAPGRTYRVDSDATHSPMFHQVEGLWI E+ISFADLKGVYLNF Sbjct: 177 SPMQVRYARMNKPPIRVIAPGRTYRVDSDATHSPMFHQVEGLWIDENISFADLKGVYLNF 236 Query: 241 VKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVVRNMGL 300 VKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHP V+RNMG Sbjct: 237 VKAFFETDDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPNVMRNMGF 296 Query: 301 DPEQYIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 342 DPEQ+IGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN Sbjct: 297 DPEQFIGFAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 338 >ref|ZP_04578151.1| phenylalanyl-tRNA synthetase subunit alpha [Oxalobacter formigenes OXCC13] gb|EEO29124.1| phenylalanyl-tRNA synthetase subunit alpha [Oxalobacter formigenes OXCC13] Length = 338 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 287/335 (85%), Positives = 309/335 (92%) Query: 8 LGQLVTQAQADFAAAPDAAALENAKAKYLGKTGQITEQMKGLGKLAPEERKVQGAIINVA 67 L QLV A+ DF APDA ALENAKA+YLGKTG ITEQMK LGK+APE RK QGA+IN A Sbjct: 4 LEQLVLLAKQDFKDAPDAVALENAKARYLGKTGLITEQMKTLGKMAPELRKAQGAVINNA 63 Query: 68 KEQIETALTARRDALANAQMQARLNAEAIDVTLPGRGRGVGGIHPVMRSWQRVEEIFRSI 127 K QIE +L ARR+ LAN +MQ RLNAEAIDVTLPGRGRG GGIHPVMR+W+R+E IF SI Sbjct: 64 KGQIEGSLNARREELANEKMQVRLNAEAIDVTLPGRGRGKGGIHPVMRTWERIERIFGSI 123 Query: 128 GFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGNDTQGKPLLLRTHTSPMQVRY 187 GFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGNDT+GKPLLLRTHTSPMQVRY Sbjct: 124 GFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGNDTEGKPLLLRTHTSPMQVRY 183 Query: 188 ARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYLNFVKAFFET 247 AR ++ P+KVIAPGRTYRVDSDATHSPMFHQVEGLWI ++ISFADLKGVYLNFV+AFFET Sbjct: 184 ARSHELPVKVIAPGRTYRVDSDATHSPMFHQVEGLWIDKNISFADLKGVYLNFVRAFFET 243 Query: 248 DDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVVRNMGLDPEQYIG 307 D+LQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSG+GQVHP V+RNMG+DP +YIG Sbjct: 244 DNLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGSGQVHPNVLRNMGIDPNEYIG 303 Query: 308 FAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 342 FAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN Sbjct: 304 FAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 338 >ref|ZP_04575954.1| phenylalanyl-tRNA synthetase subunit alpha [Oxalobacter formigenes HOxBLS] gb|EEO26916.1| phenylalanyl-tRNA synthetase subunit alpha [Oxalobacter formigenes HOxBLS] Length = 338 Score = 583 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 281/335 (83%), Positives = 304/335 (90%) Query: 8 LGQLVTQAQADFAAAPDAAALENAKAKYLGKTGQITEQMKGLGKLAPEERKVQGAIINVA 67 L QL++ A+ DF APDA +LENAKAKYLGKTG IT QMK LGK+ PE RK QGAIIN A Sbjct: 4 LEQLISLAKEDFQNAPDAVSLENAKAKYLGKTGLITGQMKMLGKMEPERRKAQGAIINAA 63 Query: 68 KEQIETALTARRDALANAQMQARLNAEAIDVTLPGRGRGVGGIHPVMRSWQRVEEIFRSI 127 K +IE AL ARR LAN ++QA+LNAEAIDVTLPGRGRG GGIHPVMR+W+R+E IF SI Sbjct: 64 KSRIEGALNARRQELANEKLQAKLNAEAIDVTLPGRGRGKGGIHPVMRTWERIERIFGSI 123 Query: 128 GFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGNDTQGKPLLLRTHTSPMQVRY 187 GFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEG D+QGKPLLLRTHTSPMQVRY Sbjct: 124 GFDVADGPEIETDWTNFTALNSPENHPARSMQDTFYIEGKDSQGKPLLLRTHTSPMQVRY 183 Query: 188 ARMNKPPIKVIAPGRTYRVDSDATHSPMFHQVEGLWIAEDISFADLKGVYLNFVKAFFET 247 AR + P+KVIAPGRTYRVDSDATHSPMFHQVEGLWI +ISFADLKGVYLNFV+AFFET Sbjct: 184 ARSHALPVKVIAPGRTYRVDSDATHSPMFHQVEGLWIDRNISFADLKGVYLNFVQAFFET 243 Query: 248 DDLQVRFRPSYFPFTEPSAEIDIAFGSGPLKGRWLEVSGAGQVHPTVVRNMGLDPEQYIG 307 ++LQVRFRPSYFPFTEPSAEIDIAFG+GPLKGRWLEVSGAGQVHP V++NMG+DPE IG Sbjct: 244 ENLQVRFRPSYFPFTEPSAEIDIAFGTGPLKGRWLEVSGAGQVHPNVLKNMGIDPENNIG 303 Query: 308 FAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 342 FAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN Sbjct: 304 FAFGSGLERLTMLRYGINDLRLFYEGDLRFLKQFN 338