BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2442.p (120 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775389.1| 50S ribosomal protein L20 [Herbaspirillum se... 156 1e-36 ref|YP_001353180.1| 50S ribosomal protein L20 [Janthinobacterium... 152 2e-35 ref|YP_295492.1| 50S ribosomal protein L20 [Ralstonia eutropha J... 152 2e-35 ref|YP_001100078.1| 50S ribosomal protein L20 [Herminiimonas ars... 150 4e-35 ref|YP_004752158.1| 50S ribosomal protein L20p [Collimonas fungi... 150 6e-35 >ref|YP_003775389.1| 50S ribosomal protein L20 [Herbaspirillum seropedicae SmR1] gb|ADJ63481.1| 50S ribosomal subunit L20 protein [Herbaspirillum seropedicae SmR1] Length = 120 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 120/120 (100%), Positives = 120/120 (100%) Query: 1 MPRVKRGVTARARHKKVLALAKGYRGRRKNVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL 60 MPRVKRGVTARARHKKVLALAKGYRGRRKNVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL Sbjct: 1 MPRVKRGVTARARHKKVLALAKGYRGRRKNVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL 60 Query: 61 WIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKANIAAA 120 WIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKANIAAA Sbjct: 61 WIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKANIAAA 120 >ref|YP_001353180.1| 50S ribosomal protein L20 [Janthinobacterium sp. Marseille] sp|A6SY33|RL20_JANMA RecName: Full=50S ribosomal protein L20 gb|ABR89192.1| large subunit ribosomal protein L20 [Janthinobacterium sp. Marseille] Length = 119 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 107/119 (89%), Positives = 111/119 (93%) Query: 1 MPRVKRGVTARARHKKVLALAKGYRGRRKNVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL 60 MPRVKRGVTARARHKKVL AKGYRGRR VYRIAKQAVMRAGQYAYRDRRNKKRVFRAL Sbjct: 1 MPRVKRGVTARARHKKVLDQAKGYRGRRSKVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL 60 Query: 61 WIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKANIAA 119 WI RINAA+R HG+TYSVFMNGLK+A+IELDRKVLADMAV DK AFAAIVNQVKANIAA Sbjct: 61 WITRINAASREHGLTYSVFMNGLKRASIELDRKVLADMAVMDKPAFAAIVNQVKANIAA 119 >ref|YP_295492.1| 50S ribosomal protein L20 [Ralstonia eutropha JMP134] ref|YP_583318.1| 50S ribosomal protein L20 [Cupriavidus metallidurans CH34] ref|YP_725849.1| 50S ribosomal protein L20 [Ralstonia eutropha H16] ref|YP_002005293.1| 50S ribosomal protein l20 [Cupriavidus taiwanensis LMG 19424] ref|YP_004685164.1| 50S ribosomal protein L20 [Cupriavidus necator N-1] sp|Q472N5|RL20_RALEJ RecName: Full=50S ribosomal protein L20 sp|Q0KBZ0|RL20_RALEH RecName: Full=50S ribosomal protein L20 sp|Q1LP77|RL20_RALME RecName: Full=50S ribosomal protein L20 sp|B3R4J4|RL20_CUPTR RecName: Full=50S ribosomal protein L20 gb|AAZ60648.1| LSU ribosomal protein L20P [Ralstonia eutropha JMP134] gb|ABF08049.1| 50S ribosomal subunit protein L20 [Cupriavidus metallidurans CH34] emb|CAJ92481.1| LSU ribosomal protein L20 [Ralstonia eutropha H16] emb|CAQ69226.1| 50S ribosomal subunit protein L20, also posttranslational autoregulator [Cupriavidus taiwanensis LMG 19424] gb|AEI76683.1| 50S ribosomal protein L20 [Cupriavidus necator N-1] Length = 118 Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats. Identities = 104/118 (88%), Positives = 110/118 (93%) Query: 1 MPRVKRGVTARARHKKVLALAKGYRGRRKNVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL 60 MPRVKRGVTARARHKKV+ AKGYRGRR NVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL Sbjct: 1 MPRVKRGVTARARHKKVIDAAKGYRGRRNNVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL 60 Query: 61 WIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKANIA 118 WIARINAA R HG+TYSVFMNGLKKA+IELDRKVL+DMA+ DK AFAAIVNQVKA +A Sbjct: 61 WIARINAATREHGMTYSVFMNGLKKASIELDRKVLSDMAIHDKPAFAAIVNQVKATVA 118 >ref|YP_001100078.1| 50S ribosomal protein L20 [Herminiimonas arsenicoxydans] sp|A4G616|RL20_HERAR RecName: Full=50S ribosomal protein L20 emb|CAL61953.1| 50S ribosomal subunit protein L20 [Herminiimonas arsenicoxydans] Length = 119 Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats. Identities = 105/119 (88%), Positives = 109/119 (91%) Query: 1 MPRVKRGVTARARHKKVLALAKGYRGRRKNVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL 60 MPRVKRGVTARARHKKVL AKGYRGRR VYRIAKQAVMRAGQYAYRDRRNKKRVFRAL Sbjct: 1 MPRVKRGVTARARHKKVLDQAKGYRGRRSKVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL 60 Query: 61 WIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKANIAA 119 WI RINAA+R HG+TYSVFMNGLK+A+IELDRKVLADMAV DK AFAAIVNQVK IAA Sbjct: 61 WITRINAASREHGLTYSVFMNGLKRASIELDRKVLADMAVMDKPAFAAIVNQVKTTIAA 119 >ref|YP_004752158.1| 50S ribosomal protein L20p [Collimonas fungivorans Ter331] gb|AEK61335.1| LSU ribosomal protein L20p [Collimonas fungivorans Ter331] Length = 119 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 107/119 (89%), Positives = 112/119 (94%) Query: 1 MPRVKRGVTARARHKKVLALAKGYRGRRKNVYRIAKQAVMRAGQYAYRDRRNKKRVFRAL 60 MPRVKRGVTARARHKK+L AKGYRGRR VYR+AKQAVMRAGQYAYRDRRNKKRVFRAL Sbjct: 1 MPRVKRGVTARARHKKILVQAKGYRGRRSKVYRVAKQAVMRAGQYAYRDRRNKKRVFRAL 60 Query: 61 WIARINAAARSHGVTYSVFMNGLKKAAIELDRKVLADMAVTDKAAFAAIVNQVKANIAA 119 WIARINAA+R HGVTYSVFMNGLK+A+IELDRKVLADMAV DK AFAAIVNQVKANIAA Sbjct: 61 WIARINAASREHGVTYSVFMNGLKRASIELDRKVLADMAVMDKPAFAAIVNQVKANIAA 119