BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2433.p         (65 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776975.1| hypothetical protein Hsero_3589 [Herbaspiril...   103   7e-21
ref|XP_002537507.1| conserved hypothetical protein [Ricinus comm...    86   1e-15
ref|YP_001100373.1| transposase (partial) [Herminiimonas arsenic...    80   1e-13
ref|YP_001100793.1| transposase (partial) [Herminiimonas arsenic...    77   8e-13
ref|YP_004752389.1| transposase [Collimonas fungivorans Ter331] ...    76   2e-12

>ref|YP_003776975.1| hypothetical protein Hsero_3589 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65067.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 201

 Score =  103 bits (258), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 54/60 (90%), Positives = 59/60 (98%)

Query: 5   VSAWLTAEAAKSRKQRRTLKQMFLDLKELGYKGSYDRVAAFGRRWKVGQLERVNAASKST 64
           ++AWL+AEA KSRKQRRTLKQMFLDLKELGYKGSYDRVAAFGRRWKVGQ+ERVN+ASKST
Sbjct: 64  LTAWLSAEAVKSRKQRRTLKQMFLDLKELGYKGSYDRVAAFGRRWKVGQMERVNSASKST 123


>ref|XP_002537507.1| conserved hypothetical protein [Ricinus communis]
 gb|EEF24876.1| conserved hypothetical protein [Ricinus communis]
          Length = 228

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/60 (76%), Positives = 52/60 (86%)

Query: 5   VSAWLTAEAAKSRKQRRTLKQMFLDLKELGYKGSYDRVAAFGRRWKVGQLERVNAASKST 64
           +SAWL AEA+K RKQRR LKQ+ LDLKELGY+GSYDRVAAF R+WKVGQ E VN+ASK T
Sbjct: 67  LSAWLKAEASKPRKQRRNLKQLHLDLKELGYEGSYDRVAAFARQWKVGQSEWVNSASKRT 126


>ref|YP_001100373.1| transposase (partial) [Herminiimonas arsenicoxydans]
          Length = 122

 Score = 79.7 bits (195), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/60 (76%), Positives = 52/60 (86%)

Query: 5   VSAWLTAEAAKSRKQRRTLKQMFLDLKELGYKGSYDRVAAFGRRWKVGQLERVNAASKST 64
           +SAWL  EA KSRKQRRTLKQM +DL  LG++GSYDRVAAF R+WKV QLERVN+ASKST
Sbjct: 61  LSAWLKTEATKSRKQRRTLKQMHIDLCALGFEGSYDRVAAFARQWKVDQLERVNSASKST 120


>ref|YP_001100793.1| transposase (partial) [Herminiimonas arsenicoxydans]
          Length = 131

 Score = 77.0 bits (188), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/61 (73%), Positives = 52/61 (85%)

Query: 5   VSAWLTAEAAKSRKQRRTLKQMFLDLKELGYKGSYDRVAAFGRRWKVGQLERVNAASKST 64
           +SAWLT E  KSRKQRRTLKQM +DL  LG++GSYDRVAAF R+WK  QLERVN+ASKST
Sbjct: 61  LSAWLTTETTKSRKQRRTLKQMHIDLYALGFEGSYDRVAAFDRQWKADQLERVNSASKST 120

Query: 65  E 65
           +
Sbjct: 121 Q 121


>ref|YP_004752389.1| transposase [Collimonas fungivorans Ter331]
 gb|AEK61566.1| transposase [Collimonas fungivorans Ter331]
          Length = 175

 Score = 75.9 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/60 (63%), Positives = 50/60 (83%)

Query: 5   VSAWLTAEAAKSRKQRRTLKQMFLDLKELGYKGSYDRVAAFGRRWKVGQLERVNAASKST 64
           +S+WL  EA KSRKQRR+LKQ+  DL  LG++GSYDRVAAF R+W++ QL+RV++ASK T
Sbjct: 64  LSSWLKTEATKSRKQRRSLKQIHADLCSLGFEGSYDRVAAFARQWRLDQLDRVSSASKGT 123