BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2431.p         (99 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_998739.1| hypothetical protein Veis_4016 [Verminephrobact...    57   7e-07
ref|YP_001020728.1| hypothetical protein Mpe_A1531 [Methylibium ...    57   1e-06

>ref|YP_998739.1| hypothetical protein Veis_4016 [Verminephrobacter eiseniae
          EF01-2]
 gb|ABM59721.1| hypothetical protein Veis_4016 [Verminephrobacter eiseniae
          EF01-2]
          Length = 96

 Score = 57.4 bits (137), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 55/92 (59%), Positives = 70/92 (76%)

Query: 2  VAKAVERIAVQATPQEKKAIIAKAKRLGLPISELMRRGAAAYESDEATEELGLLADKAKA 61
          +A AV+RI VQA+ Q+KK+I+AKAK+L +P+SELMRRGA AY+S EA   LG LAD AKA
Sbjct: 1  MASAVQRIVVQASAQDKKSIVAKAKKLDIPMSELMRRGAFAYQSGEADAALGALADAAKA 60

Query: 62 GADRVSESIDDVLSFVEASNARITATEAKAAT 93
           A+R   +IDD L  +EASN RI A EA+ A+
Sbjct: 61 AAERAGAAIDDALDCIEASNRRIAAMEARHAS 92


>ref|YP_001020728.1| hypothetical protein Mpe_A1531 [Methylibium petroleiphilum PM1]
 gb|ABM94493.1| hypothetical protein Mpe_A1531 [Methylibium petroleiphilum PM1]
          Length = 107

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/98 (64%), Positives = 76/98 (77%)

Query: 2  VAKAVERIAVQATPQEKKAIIAKAKRLGLPISELMRRGAAAYESDEATEELGLLADKAKA 61
          +A AVERI VQAT Q+KKAI AKAKRL LP+SELMRRGA AYE+ EA +ELG+LAD A+ 
Sbjct: 1  MAAAVERIVVQATSQDKKAIAAKAKRLDLPVSELMRRGAFAYEAKEADQELGVLADAARD 60

Query: 62 GADRVSESIDDVLSFVEASNARITATEAKAATSLRKAS 99
           ADR   +IDD L+F+EASN RI A EAKA+   + A+
Sbjct: 61 AADRAGAAIDDALNFIEASNKRIAAMEAKASRPPKPAA 98