BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2423.p (174 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003520106.1| Lrp [Pantoea ananatis LMG 20103] >gi|2911523... 251 2e-65 ref|YP_004152957.1| AsnC family transcriptional regulator [Vario... 236 1e-60 ref|XP_003342769.1| hypothetical protein SMAC_10202 [Sordaria ma... 181 3e-44 ref|YP_498202.1| AsnC family transcriptional regulator [Novosphi... 174 4e-42 ref|ZP_01549596.1| probable transcriptional regulator protein (l... 171 3e-41 >ref|YP_003520106.1| Lrp [Pantoea ananatis LMG 20103] gb|ADD76978.1| Lrp [Pantoea ananatis LMG 20103] dbj|BAK11227.1| leucine-responsive regulatory protein Lrp [Pantoea ananatis AJ13355] Length = 167 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 116/166 (69%), Positives = 144/166 (86%) Query: 8 MRPTDPLDRTDIKILEHLQREGRCSNVELAEAVNLSPSPCLTRTKRMEETGVIAGYAARV 67 M PLDRTDI+ILEHLQREGRCS VELAEA++LSPSPCL RT+R+E++G+I+GYAARV Sbjct: 1 MTHIKPLDRTDIRILEHLQREGRCSIVELAEAISLSPSPCLARTRRLEQSGIISGYAARV 60 Query: 68 ALDKLGSHVVVFSEITLGSHRPADFRKFEQGAAKYAEIVECYNVSGGYDYLLKIVSPTVA 127 L+KLG+++VVFSEITL SH P+DF KFE GA KY EIVECYN+SGGYDYLLKI++P + Sbjct: 61 TLNKLGNNLVVFSEITLNSHYPSDFIKFESGACKYREIVECYNISGGYDYLLKIIAPNLH 120 Query: 128 LFQELMERLLEDEIGIEKFASRIVLRHPYEQRVEPVEVIASGKSSW 173 FQ+LM+RLL+DEIGI KFASR+VLR P++ R EP+ IA+G++SW Sbjct: 121 RFQDLMDRLLDDEIGIAKFASRVVLRQPWQWREEPLSEIATGQASW 166 >ref|YP_004152957.1| AsnC family transcriptional regulator [Variovorax paradoxus EPS] gb|ADU34846.1| transcriptional regulator, AsnC family [Variovorax paradoxus EPS] Length = 166 Score = 236 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 111/163 (68%), Positives = 136/163 (83%) Query: 8 MRPTDPLDRTDIKILEHLQREGRCSNVELAEAVNLSPSPCLTRTKRMEETGVIAGYAARV 67 MR DR D+KIL HLQREGRCSNV+LAE+V LSPSPCL RTKR++ETG+I GY A + Sbjct: 1 MRSAVSFDRFDLKILVHLQREGRCSNVDLAESVGLSPSPCLLRTKRLQETGLIRGYGADI 60 Query: 68 ALDKLGSHVVVFSEITLGSHRPADFRKFEQGAAKYAEIVECYNVSGGYDYLLKIVSPTVA 127 AL+KLG HV+VFSE+T+GSHRP DFRKFE+ AAKY EIVECYNVSGGYDYLLKIV+P + Sbjct: 61 ALEKLGDHVIVFSEVTIGSHRPHDFRKFEEAAAKYEEIVECYNVSGGYDYLLKIVAPGIG 120 Query: 128 LFQELMERLLEDEIGIEKFASRIVLRHPYEQRVEPVEVIASGK 170 FQ +M+++LE++IGIE+FASRIVLRH +R P+ +IA+ K Sbjct: 121 YFQAVMDKMLEEDIGIERFASRIVLRHSMGRRGYPLGIIATQK 163 >ref|XP_003342769.1| hypothetical protein SMAC_10202 [Sordaria macrospora k-hell] emb|CBI60819.1| unnamed protein product [Sordaria macrospora] Length = 164 Score = 181 bits (459), Expect = 3e-44, Method: Composition-based stats. Identities = 88/164 (53%), Positives = 116/164 (70%) Query: 8 MRPTDPLDRTDIKILEHLQREGRCSNVELAEAVNLSPSPCLTRTKRMEETGVIAGYAARV 67 M P+ LDR D +IL LQR GR +NV+LA+AV LSPSPCL+R KR+E+ G I GY A V Sbjct: 1 MTPSPKLDRLDFRILAQLQRNGRITNVDLADAVGLSPSPCLSRVKRLEKAGYITGYGAHV 60 Query: 68 ALDKLGSHVVVFSEITLGSHRPADFRKFEQGAAKYAEIVECYNVSGGYDYLLKIVSPTVA 127 AL KLG + VF+EITL HR DF +FEQ A E+VEC+ VSGGYDYL+K ++ V+ Sbjct: 61 ALAKLGETLTVFTEITLKDHRTGDFSRFEQRARNVPEVVECHLVSGGYDYLVKFITRNVS 120 Query: 128 LFQELMERLLEDEIGIEKFASRIVLRHPYEQRVEPVEVIASGKS 171 +QEL+E +LE + GIEK+ S IVL+ P +R +P+E + +S Sbjct: 121 QYQELIESILESDFGIEKYFSYIVLKSPIVKRYDPIEALFDERS 164 >ref|YP_498202.1| AsnC family transcriptional regulator [Novosphingobium aromaticivorans DSM 12444] gb|ABD27368.1| transcriptional regulator, AsnC family [Novosphingobium aromaticivorans DSM 12444] Length = 165 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 84/157 (53%), Positives = 111/157 (70%) Query: 8 MRPTDPLDRTDIKILEHLQREGRCSNVELAEAVNLSPSPCLTRTKRMEETGVIAGYAARV 67 M P LDR D+KIL LQ+EGR +NVELA+AV LSPSPCLTR KR+E+ G I GY A V Sbjct: 1 MLPGPKLDRIDLKILAKLQQEGRITNVELADAVGLSPSPCLTRVKRLEKAGYITGYGAHV 60 Query: 68 ALDKLGSHVVVFSEITLGSHRPADFRKFEQGAAKYAEIVECYNVSGGYDYLLKIVSPTVA 127 L+KLG + VF+E+TL HR DF +FE K EIVEC+ VSGGYDYLLK V+ V+ Sbjct: 61 NLNKLGEFLTVFTEVTLSEHRRGDFSRFESRIVKIDEIVECHLVSGGYDYLLKFVARGVS 120 Query: 128 LFQELMERLLEDEIGIEKFASRIVLRHPYEQRVEPVE 164 +Q ++E +LE + GIEK+ S +V++ P+ + P++ Sbjct: 121 HYQSIIEGMLESDYGIEKYFSYVVIKSPFIKHHFPIQ 157 >ref|ZP_01549596.1| probable transcriptional regulator protein (leucine-responsive), AsnC family protein [Stappia aggregata IAM 12614] gb|EAV41823.1| probable transcriptional regulator protein (leucine-responsive), AsnC family protein [Stappia aggregata IAM 12614] Length = 158 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 78/153 (50%), Positives = 115/153 (75%) Query: 14 LDRTDIKILEHLQREGRCSNVELAEAVNLSPSPCLTRTKRMEETGVIAGYAARVALDKLG 73 LDR DI+IL LQ+ GR +NVELAE V+LSPSPCL R K++++ G I GY+A+VAL KLG Sbjct: 3 LDRIDIRILYELQKNGRITNVELAELVHLSPSPCLMRVKKLQQAGYITGYSAQVALAKLG 62 Query: 74 SHVVVFSEITLGSHRPADFRKFEQGAAKYAEIVECYNVSGGYDYLLKIVSPTVALFQELM 133 + VF+E+TL +HR DF +F+Q A K EI+EC+ +SGGYDYLLK V+ ++ +Q +M Sbjct: 63 PTITVFTEVTLKNHRKMDFDRFQQAAEKVEEIIECHLISGGYDYLLKFVTGSIGDYQAIM 122 Query: 134 ERLLEDEIGIEKFASRIVLRHPYEQRVEPVEVI 166 ERL++ +IGI+K+ S +V++ P+ + P++ + Sbjct: 123 ERLIDMDIGIDKYFSFVVMKSPFIKPHLPLKTM 155