BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2422.p (450 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003520107.1| GabT [Pantoea ananatis LMG 20103] >gi|291152... 769 0.0 ref|YP_004152956.1| class III aminotransferase [Variovorax parad... 747 0.0 ref|ZP_06897338.1| aminotransferase [Roseomonas cervicalis ATCC ... 508 e-142 gb|AEH81744.1| Aminotransferase [Sinorhizobium meliloti SM11] 506 e-141 ref|YP_004551791.1| Alanine--glyoxylate transaminase [Sinorhizob... 504 e-141 >ref|YP_003520107.1| GabT [Pantoea ananatis LMG 20103] gb|ADD76979.1| GabT [Pantoea ananatis LMG 20103] dbj|BAK11228.1| 4-aminobutyrate (GABA) amino transferase GabT [Pantoea ananatis AJ13355] Length = 455 Score = 770 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 381/447 (85%), Positives = 415/447 (92%) Query: 1 MSTPTDLTMVNAYIPGRADVGPVTGALIERRNALLGPAYRLMYEHPLHIVRGEGVWLIDP 60 M + TDL MVNAYIPG+ DVGPVT A+I+RR+ALLGPAYRLMYEHPLHIVRGEGVWLIDP Sbjct: 1 MKSTTDLNMVNAYIPGQVDVGPVTAAMIQRRDALLGPAYRLMYEHPLHIVRGEGVWLIDP 60 Query: 61 QGRRYLDVYNNVTSLGHCHPAVTAAICEQVQTLATNTRYLHDTILELAERLLATVPETSL 120 +GRRYLD+YNNVTSLGHCHPAVT AIC+QVQTLATNTRYLHDTILELAERLLATVPET+L Sbjct: 61 EGRRYLDIYNNVTSLGHCHPAVTEAICQQVQTLATNTRYLHDTILELAERLLATVPETAL 120 Query: 121 AHLMLTCTGSEANDLAYRIAKVRTGGTGVIVTDTAYHGITDAVSQFSPSLGSSVNLGPHV 180 AHLMLTCTGSEANDLAYRIAKVRTGGTG+IVT+TAYHGITDAVSQFSPSLG+SV+LG HV Sbjct: 121 AHLMLTCTGSEANDLAYRIAKVRTGGTGIIVTETAYHGITDAVSQFSPSLGTSVDLGAHV 180 Query: 181 RLVPAPRAYHAPGQDLGEKFTRDVQAAIADLQRHGIRPAALIVDSLFTSDGILPGPAGFL 240 RL+PAPR YHA G DL E+FTRDV+ AIADLQRHGI+PAALIVDSLFTSDGILPGP GF+ Sbjct: 181 RLIPAPRLYHAEGADLSERFTRDVENAIADLQRHGIKPAALIVDSLFTSDGILPGPVGFM 240 Query: 241 TGAVQAIKEAGGLFIADEVQPGFGRTGEHMWGFQRHGIAPDIVTMGKPMGNGQPVAGILA 300 GAV+ IK AGG+FIADEVQPGFGRTGE MWGFQRHGI PD+VT+GKPMGNGQP+AG+LA Sbjct: 241 KGAVETIKRAGGVFIADEVQPGFGRTGETMWGFQRHGIIPDMVTLGKPMGNGQPIAGLLA 300 Query: 301 TADVLQEFGQRSRYFNTFAGNTVSCAAALAVLKTIERESLIPHAREVGGVLLDGIRALAV 360 TADVL EFGQRSRYFNTFAGNTVSCAAALAVLKTIER+ L+ HAR+VG LLDGI AL Sbjct: 301 TADVLAEFGQRSRYFNTFAGNTVSCAAALAVLKTIERDGLVAHARDVGKQLLDGITALGK 360 Query: 361 RHEAIGDVRGAGMFVGVELVSDRAQRTPDRTLTSEVVNRMRQKGVLLSACAMGHNVLKIR 420 +HEAIGDVRGAG+FVGVELVSDR RTPDR LTS+VVNRMRQKGVLLSACAMGHNVLKIR Sbjct: 361 KHEAIGDVRGAGLFVGVELVSDRLSRTPDRWLTSQVVNRMRQKGVLLSACAMGHNVLKIR 420 Query: 421 PPLVLTGEQAGMVIDALDESLTEARSA 447 PPLVLT +QAGM+ID LD+SLTEA +A Sbjct: 421 PPLVLTADQAGMIIDVLDQSLTEATAA 447 >ref|YP_004152956.1| class III aminotransferase [Variovorax paradoxus EPS] gb|ADU34845.1| aminotransferase class-III [Variovorax paradoxus EPS] Length = 452 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 379/445 (85%), Positives = 404/445 (90%) Query: 1 MSTPTDLTMVNAYIPGRADVGPVTGALIERRNALLGPAYRLMYEHPLHIVRGEGVWLIDP 60 M T D MVNAYIPGRA+VGP T A+IERRNALLGPAYRLMYEHPLHIVRG+GVWL+DP Sbjct: 1 MKTTADFNMVNAYIPGRANVGPATEAMIERRNALLGPAYRLMYEHPLHIVRGDGVWLMDP 60 Query: 61 QGRRYLDVYNNVTSLGHCHPAVTAAICEQVQTLATNTRYLHDTILELAERLLATVPETSL 120 +GRRYLDVYNNVTSLGHCHPAVT AIC QVQTLATNTRYLHDTILELAERL+A+VP T L Sbjct: 61 EGRRYLDVYNNVTSLGHCHPAVTEAICRQVQTLATNTRYLHDTILELAERLIASVPGTDL 120 Query: 121 AHLMLTCTGSEANDLAYRIAKVRTGGTGVIVTDTAYHGITDAVSQFSPSLGSSVNLGPHV 180 AHLMLTCTGSEANDLAYRIAKVRTGGTGVIVTDTAYHGITDAVSQFSPSLG +V LGPHV Sbjct: 121 AHLMLTCTGSEANDLAYRIAKVRTGGTGVIVTDTAYHGITDAVSQFSPSLGVTVALGPHV 180 Query: 181 RLVPAPRAYHAPGQDLGEKFTRDVQAAIADLQRHGIRPAALIVDSLFTSDGILPGPAGFL 240 RLVPAPR YHA G DLGE+FTRDV+AAIADLQRHGI+PAALIVDSLFTSDGILP PAGFL Sbjct: 181 RLVPAPRLYHAEGADLGERFTRDVEAAIADLQRHGIKPAALIVDSLFTSDGILPEPAGFL 240 Query: 241 TGAVQAIKEAGGLFIADEVQPGFGRTGEHMWGFQRHGIAPDIVTMGKPMGNGQPVAGILA 300 GAV+AIK AGGLFIADEVQPGFGRTGEHMWGFQRHG+ PDIVT+GKPMGNGQP+AG+LA Sbjct: 241 KGAVEAIKRAGGLFIADEVQPGFGRTGEHMWGFQRHGLVPDIVTLGKPMGNGQPIAGLLA 300 Query: 301 TADVLQEFGQRSRYFNTFAGNTVSCAAALAVLKTIERESLIPHAREVGGVLLDGIRALAV 360 TAD L EFG+ SRYFNTFAGNTVSCAAALAVL+TIERE L+PHA VG +L DGI LA Sbjct: 301 TADALAEFGKHSRYFNTFAGNTVSCAAALAVLETIERERLLPHAAHVGRLLRDGIAGLAA 360 Query: 361 RHEAIGDVRGAGMFVGVELVSDRAQRTPDRTLTSEVVNRMRQKGVLLSACAMGHNVLKIR 420 RHEAIGDVRGAG+FVGVELVS+RA R PDR LTS VVN MR KGVLLSACA GHNVLKIR Sbjct: 361 RHEAIGDVRGAGLFVGVELVSNRATRAPDRGLTSRVVNLMRDKGVLLSACAQGHNVLKIR 420 Query: 421 PPLVLTGEQAGMVIDALDESLTEAR 445 PPLVL+ EQAGMVI+ALD SL EA+ Sbjct: 421 PPLVLSAEQAGMVIEALDASLAEAQ 445 >ref|ZP_06897338.1| aminotransferase [Roseomonas cervicalis ATCC 49957] gb|EFH10960.1| aminotransferase [Roseomonas cervicalis ATCC 49957] Length = 440 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 262/442 (59%), Positives = 324/442 (73%), Gaps = 3/442 (0%) Query: 7 LTMVNAYIPGRAD-VGPVTGALIERRNALLGPAYRLMYEHPLHIVRGEGVWLIDPQGRRY 65 ++M+NA+ P + VG A+I RR LLGPAYRL Y +P+H+VRGEGVWL DP G Y Sbjct: 1 MSMINAFDPKATNGVGAREQAMIARRQKLLGPAYRLFYANPVHLVRGEGVWLYDPDGNAY 60 Query: 66 LDVYNNVTSLGHCHPAVTAAICEQVQTLATNTRYLHDTILELAERLLATVPETSLAHLML 125 LDVYNNV S+GHCHP V AA+ Q L T+TRYL+ IL+ AE+LL PE L+H+M Sbjct: 61 LDVYNNVASVGHCHPHVVAALSRQASVLNTHTRYLNPVILDYAEKLLGHFPE-ELSHVMF 119 Query: 126 TCTGSEANDLAYRIAKVRTGGTGVIVTDTAYHGITDAVSQFSPSLGSSVNLGPHVRLVPA 185 TCTGSEANDLAYR+A+ TGG G IVT AYHG+T A+S+ SPSLG + LG +VR VPA Sbjct: 120 TCTGSEANDLAYRVARSFTGGEGFIVTRLAYHGVTVAISEMSPSLGQHITLGKNVRTVPA 179 Query: 186 PRAYHAPGQDLGEKFTRDVQAAIADLQRHGIRPAALIVDSLFTSDGILPGPAGFLTGAVQ 245 P Y G+ + E+F DV+AAI DL+ G+RPAAL+VD++F+SDG+ PAGFL AV Sbjct: 180 PDLYRG-GEGVAERFAADVRAAIVDLEASGLRPAALLVDTIFSSDGVFADPAGFLAPAVA 238 Query: 246 AIKEAGGLFIADEVQPGFGRTGEHMWGFQRHGIAPDIVTMGKPMGNGQPVAGILATADVL 305 AI+EAGGLFIADEVQPGFGRTGE MWGFQRHG+ PDIVTMGKPMGNG P+A +++ +L Sbjct: 239 AIREAGGLFIADEVQPGFGRTGEAMWGFQRHGLVPDIVTMGKPMGNGHPIAAMVSQPHIL 298 Query: 306 QEFGQRSRYFNTFAGNTVSCAAALAVLKTIERESLIPHAREVGGVLLDGIRALAVRHEAI 365 Q FG+ +RYFNTF GN VSCA AVL+ IE E L+ +A + G VL DG+R LA RH I Sbjct: 299 QRFGEATRYFNTFGGNPVSCAVGQAVLEVIEGEGLLRNAHDTGAVLRDGLRDLAKRHALI 358 Query: 366 GDVRGAGMFVGVELVSDRAQRTPDRTLTSEVVNRMRQKGVLLSACAMGHNVLKIRPPLVL 425 GDVRGAG+FVGVELV+DRA+RTP T+ +VN +R++ VL+SA NVLKIRPPLV Sbjct: 359 GDVRGAGLFVGVELVTDRARRTPASAETARLVNGLRERRVLISAAGPDANVLKIRPPLVF 418 Query: 426 TGEQAGMVIDALDESLTEARSA 447 E A ++A++ L E A Sbjct: 419 RPEHAERFLEAMEAVLREVSPA 440 >gb|AEH81744.1| Aminotransferase [Sinorhizobium meliloti SM11] Length = 438 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 260/438 (59%), Positives = 325/438 (74%), Gaps = 6/438 (1%) Query: 7 LTMVNAYIPGRAD---VGPVTGALIERRNALLGPAYRLMYEHPLHIVRGEGVWLIDPQGR 63 ++MVNA+ R D + ALI RR +LGPAYRL YE PLH+VRGEGV+L D G Sbjct: 1 MSMVNAF--SREDFERLDKAERALIARREKVLGPAYRLFYEKPLHLVRGEGVFLYDAAGE 58 Query: 64 RYLDVYNNVTSLGHCHPAVTAAICEQVQTLATNTRYLHDTILELAERLLATVPETSLAHL 123 RYLD YNNV+S+GHCHP V AI Q L T+TRYLH+ I++ AE L AT PE +L+ Sbjct: 59 RYLDAYNNVSSVGHCHPRVVEAITRQTAVLNTHTRYLHEGIVDYAEALTATFPE-ALSQA 117 Query: 124 MLTCTGSEANDLAYRIAKVRTGGTGVIVTDTAYHGITDAVSQFSPSLGSSVNLGPHVRLV 183 M TCTGSEANDLA RIA+ TGGTG+I T+ AYHG+T AV++FSPSLG SV LGPHVR V Sbjct: 118 MFTCTGSEANDLAVRIARFVTGGTGIIATELAYHGLTSAVAEFSPSLGESVTLGPHVRTV 177 Query: 184 PAPRAYHAPGQDLGEKFTRDVQAAIADLQRHGIRPAALIVDSLFTSDGILPGPAGFLTGA 243 AP +Y +++ EKF RDV+AAIADL+RHGI+PA LI D++F+SDGI GP GFL A Sbjct: 178 SAPDSYRHSPEEIMEKFGRDVRAAIADLKRHGIKPAMLITDTIFSSDGIFDGPRGFLKPA 237 Query: 244 VQAIKEAGGLFIADEVQPGFGRTGEHMWGFQRHGIAPDIVTMGKPMGNGQPVAGILATAD 303 V AI EAGGLF+ADEVQPGFGRTGE MWGF+RHG+APDIVT+GKPMGNG P+AGI+ + Sbjct: 238 VDAIHEAGGLFVADEVQPGFGRTGETMWGFERHGVAPDIVTIGKPMGNGYPMAGIVLRPE 297 Query: 304 VLQEFGQRSRYFNTFAGNTVSCAAALAVLKTIERESLIPHAREVGGVLLDGIRALAVRHE 363 V+ EFG R+RYFNTF GN V+ AA AVL TI E L +A VG ++D +++L+ H Sbjct: 298 VIAEFGPRARYFNTFGGNPVAAAAGKAVLDTIRTEGLQQNALVVGRHIMDRVKSLSAIHP 357 Query: 364 AIGDVRGAGMFVGVELVSDRAQRTPDRTLTSEVVNRMRQKGVLLSACAMGHNVLKIRPPL 423 AIGDVRG+G+F+GVE+V+D + PD LT+ +VN +R++ +L+SA NVLKIRPPL Sbjct: 358 AIGDVRGSGLFIGVEIVADSTTKRPDAALTTRIVNGLRERRILISASGPNANVLKIRPPL 417 Query: 424 VLTGEQAGMVIDALDESL 441 + + E A M++DAL L Sbjct: 418 IFSRENADMLVDALGNVL 435 >ref|YP_004551791.1| Alanine--glyoxylate transaminase [Sinorhizobium meliloti AK83] gb|AEG07760.1| Alanine--glyoxylate transaminase [Sinorhizobium meliloti BL225C] gb|AEG57668.1| Alanine--glyoxylate transaminase [Sinorhizobium meliloti AK83] Length = 438 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 259/438 (59%), Positives = 325/438 (74%), Gaps = 6/438 (1%) Query: 7 LTMVNAYIPGRAD---VGPVTGALIERRNALLGPAYRLMYEHPLHIVRGEGVWLIDPQGR 63 ++MVNA+ R D + ALI RR +LGPAYRL YE PLH+VRGEGV+L D G Sbjct: 1 MSMVNAF--SREDFERLDKAERALIARREKVLGPAYRLFYEKPLHLVRGEGVFLYDAAGE 58 Query: 64 RYLDVYNNVTSLGHCHPAVTAAICEQVQTLATNTRYLHDTILELAERLLATVPETSLAHL 123 RYLD YNNV+S+GHCHP V AI Q L T+TRYLH+ I++ AE L AT PE +L+ Sbjct: 59 RYLDAYNNVSSVGHCHPRVVEAITRQTAVLNTHTRYLHEGIVDYAEALTATFPE-ALSQA 117 Query: 124 MLTCTGSEANDLAYRIAKVRTGGTGVIVTDTAYHGITDAVSQFSPSLGSSVNLGPHVRLV 183 M TCTGSEANDLA RIA+ TGGTG+I T+ AYHG+T AV++FSPSLG SV LGPHVR V Sbjct: 118 MFTCTGSEANDLAVRIARFVTGGTGIIATELAYHGLTSAVAEFSPSLGESVTLGPHVRTV 177 Query: 184 PAPRAYHAPGQDLGEKFTRDVQAAIADLQRHGIRPAALIVDSLFTSDGILPGPAGFLTGA 243 AP +Y +++ EKF RDV+AAIADL+RHGI+PA LI D++F+SDGI GP GFL A Sbjct: 178 SAPDSYRHSPEEIMEKFGRDVRAAIADLKRHGIKPAMLITDTIFSSDGIFDGPRGFLKPA 237 Query: 244 VQAIKEAGGLFIADEVQPGFGRTGEHMWGFQRHGIAPDIVTMGKPMGNGQPVAGILATAD 303 V AI EAGGLF+ADEVQPGFGRTGE MWGF+RHG+APDIVT+GKPMGNG P+AGI+ + Sbjct: 238 VDAIHEAGGLFVADEVQPGFGRTGETMWGFERHGVAPDIVTIGKPMGNGYPMAGIVLRPE 297 Query: 304 VLQEFGQRSRYFNTFAGNTVSCAAALAVLKTIERESLIPHAREVGGVLLDGIRALAVRHE 363 V+ EFG R+RYFNTF GN V+ AA AVL TI E L +A VG +++ +++L+ H Sbjct: 298 VIAEFGPRARYFNTFGGNPVAAAAGKAVLDTIRTEGLQQNALVVGRHIMERVKSLSAIHP 357 Query: 364 AIGDVRGAGMFVGVELVSDRAQRTPDRTLTSEVVNRMRQKGVLLSACAMGHNVLKIRPPL 423 AIGDVRG+G+F+GVE+V+D + PD LT+ +VN +R++ +L+SA NVLKIRPPL Sbjct: 358 AIGDVRGSGLFIGVEIVADSTIKRPDAALTTRIVNGLRERRILISASGPNANVLKIRPPL 417 Query: 424 VLTGEQAGMVIDALDESL 441 + + E A M++DAL L Sbjct: 418 IFSRENADMLVDALGNVL 435