BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2405.p (249 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777498.1| branched-chain amino acid ABC transporter pe... 397 e-109 ref|YP_004754717.1| putative amino-acid transmembrane ABC transp... 282 3e-74 ref|ZP_08275626.1| ABC-type transporter, permease component [Oxa... 280 2e-73 ref|YP_001859258.1| inner-membrane translocator [Burkholderia ph... 279 2e-73 ref|ZP_03264653.1| inner-membrane translocator [Burkholderia sp.... 278 6e-73 >ref|YP_003777498.1| branched-chain amino acid ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ65590.1| ABC-type branched-chain amino acid transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 350 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 235/248 (94%), Positives = 242/248 (97%) Query: 2 QIGLPLVLYALTRYVDLQALAMPWQILLTLLIVVPMGPMIYRVAYQPLAHSSVLVLLIVS 61 +GLPL + ALTR +DLQALAMPWQILL LLIVVPMGPMIYRVAYQPLAHSSVLVLLIVS Sbjct: 103 HLGLPLAILALTRCLDLQALAMPWQILLALLIVVPMGPMIYRVAYQPLAHSSVLVLLIVS 162 Query: 62 LGVHLAMVGLGLLMFGPEGTNTKPFTEMQFNLGESPVSGQSVIVLVTVAALIAVIYVFFE 121 LGVHLAMVGLGLLMFGPEGTNT+PFTEMQFNLGESPVSGQSVIVL+TVAALIAVIYVFFE Sbjct: 163 LGVHLAMVGLGLLMFGPEGTNTRPFTEMQFNLGESPVSGQSVIVLITVAALIAVIYVFFE 222 Query: 122 RTLTGKALRATAVNRLGARLVGVGINQAGKLSFAMSAGIGALCGILIAPFTIVNYESGFI 181 RTLTGKALRATAVNRLGARLVGVGINQAGKLSF M+AGIGALCGILIAPFTIVNYESGFI Sbjct: 223 RTLTGKALRATAVNRLGARLVGVGINQAGKLSFGMAAGIGALCGILIAPFTIVNYESGFI 282 Query: 182 IALKGFVGAIFGGLASYPIAALGSVSVGLIESFSSFWASAFKELIVFTVIIPILLWRSLT 241 IALKGFVGAIFGGLASYPIAALGSVSVGLIESFSSFWASA+KELIVFTVIIPILLWRSLT Sbjct: 283 IALKGFVGAIFGGLASYPIAALGSVSVGLIESFSSFWASAYKELIVFTVIIPILLWRSLT 342 Query: 242 SHHIDEEA 249 SHHIDEEA Sbjct: 343 SHHIDEEA 350 >ref|YP_004754717.1| putative amino-acid transmembrane ABC transporter protein [Collimonas fungivorans Ter331] gb|AEK63894.1| putative amino-acid transmembrane ABC transporter protein [Collimonas fungivorans Ter331] Length = 351 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 162/243 (66%), Positives = 203/243 (83%) Query: 5 LPLVLYALTRYVDLQALAMPWQILLTLLIVVPMGPMIYRVAYQPLAHSSVLVLLIVSLGV 64 LPL +YA+TR+ LAMP Q+LLTLLIVVPMGPMIYR+A+QPLA +S LVLLIVS+ V Sbjct: 106 LPLAIYAVTRWYGHATLAMPLQVLLTLLIVVPMGPMIYRLAFQPLAEASTLVLLIVSVAV 165 Query: 65 HLAMVGLGLLMFGPEGTNTKPFTEMQFNLGESPVSGQSVIVLVTVAALIAVIYVFFERTL 124 H A++G+GLLMFG EG+ T PF++ +F++G VSGQS +++ LI +Y++FERTL Sbjct: 166 HYALIGIGLLMFGAEGSRTTPFSDARFDIGGLTVSGQSCVIIAVSLLLIIALYLYFERTL 225 Query: 125 TGKALRATAVNRLGARLVGVGINQAGKLSFAMSAGIGALCGILIAPFTIVNYESGFIIAL 184 +GKALRATAVNRLGARLVG+G QAG+L+F ++A +GALCGILIAP T V Y+SGF+I L Sbjct: 226 SGKALRATAVNRLGARLVGIGTAQAGRLAFTLAAALGALCGILIAPLTTVYYDSGFLIGL 285 Query: 185 KGFVGAIFGGLASYPIAALGSVSVGLIESFSSFWASAFKELIVFTVIIPILLWRSLTSHH 244 KGFVGAI GGL SYP+AA G++ VGL+ES+SSFWASAFKE+IVFT+IIP+LLWRSLTS Sbjct: 286 KGFVGAIIGGLGSYPVAAAGALLVGLLESYSSFWASAFKEVIVFTLIIPVLLWRSLTSKQ 345 Query: 245 IDE 247 +DE Sbjct: 346 VDE 348 >ref|ZP_08275626.1| ABC-type transporter, permease component [Oxalobacteraceae bacterium IMCC9480] gb|EGF30908.1| ABC-type transporter, permease component [Oxalobacteraceae bacterium IMCC9480] Length = 341 Score = 280 bits (715), Expect = 2e-73, Method: Composition-based stats. Identities = 156/245 (63%), Positives = 199/245 (81%) Query: 3 IGLPLVLYALTRYVDLQALAMPWQILLTLLIVVPMGPMIYRVAYQPLAHSSVLVLLIVSL 62 + LPL+LY LTR L M Q+ LTL +V+PMGPMIYR+A+QPLA +S LVLLIVS+ Sbjct: 94 VALPLLLYGLTRQFGNAQLPMLLQVALTLALVIPMGPMIYRLAFQPLAEASTLVLLIVSV 153 Query: 63 GVHLAMVGLGLLMFGPEGTNTKPFTEMQFNLGESPVSGQSVIVLVTVAALIAVIYVFFER 122 VH A++G GL++FG EG+ T PF++ +F G VSGQS+++L T A LI +Y++FER Sbjct: 154 SVHFALLGTGLVLFGAEGSRTTPFSDARFEFGALQVSGQSLVILATSALLIGALYLYFER 213 Query: 123 TLTGKALRATAVNRLGARLVGVGINQAGKLSFAMSAGIGALCGILIAPFTIVNYESGFII 182 TL+GKALRATAVNRLGA+LVG+G QAG+ +F ++AG+GALCG+LIAP T + Y+SGF+I Sbjct: 214 TLSGKALRATAVNRLGAQLVGIGTTQAGRTAFTLAAGLGALCGVLIAPLTTIYYDSGFLI 273 Query: 183 ALKGFVGAIFGGLASYPIAALGSVSVGLIESFSSFWASAFKELIVFTVIIPILLWRSLTS 242 LKGFVGAI GGL SYPIAA G++ VGL+ES+SSFWASAFKE+IVFT+IIP+LLWRSL S Sbjct: 274 GLKGFVGAIIGGLGSYPIAAAGALLVGLLESYSSFWASAFKEVIVFTLIIPVLLWRSLRS 333 Query: 243 HHIDE 247 H+DE Sbjct: 334 KHVDE 338 >ref|YP_001859258.1| inner-membrane translocator [Burkholderia phymatum STM815] gb|ACC72212.1| inner-membrane translocator [Burkholderia phymatum STM815] Length = 351 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 154/244 (63%), Positives = 199/244 (81%) Query: 5 LPLVLYALTRYVDLQALAMPWQILLTLLIVVPMGPMIYRVAYQPLAHSSVLVLLIVSLGV 64 P+ +YA+TR V +Q L M QI LTLLIVVPMGP +YR+AY+P+A ++ L+LLIVS+ V Sbjct: 106 FPVAVYAVTRGVFMQPLPMIAQIALTLLIVVPMGPFVYRLAYEPVAEATTLLLLIVSVAV 165 Query: 65 HLAMVGLGLLMFGPEGTNTKPFTEMQFNLGESPVSGQSVIVLVTVAALIAVIYVFFERTL 124 H AMVGLGL+MFG EG+ T FT+ FN+G +SGQSV V+ LI V+YV+F+R++ Sbjct: 166 HFAMVGLGLVMFGAEGSRTNAFTDSTFNIGTLSISGQSVWVIGVAVVLIGVLYVYFDRSI 225 Query: 125 TGKALRATAVNRLGARLVGVGINQAGKLSFAMSAGIGALCGILIAPFTIVNYESGFIIAL 184 +GKALRAT+VNRLGARLVG+G QAG+L+F ++AG+G LCGIL+AP T + Y+SGF+I L Sbjct: 226 SGKALRATSVNRLGARLVGIGTTQAGRLAFTLAAGLGVLCGILVAPLTTIYYDSGFLIGL 285 Query: 185 KGFVGAIFGGLASYPIAALGSVSVGLIESFSSFWASAFKELIVFTVIIPILLWRSLTSHH 244 KGFVGAI GGL SYP+AA GS+ VGL+ES+SSFWAS++KE+IVFT+IIP+LLWRSL S H Sbjct: 286 KGFVGAIIGGLVSYPLAAAGSILVGLLESYSSFWASSYKEVIVFTLIIPVLLWRSLASPH 345 Query: 245 IDEE 248 +EE Sbjct: 346 TEEE 349 >ref|ZP_03264653.1| inner-membrane translocator [Burkholderia sp. H160] gb|EEA03810.1| inner-membrane translocator [Burkholderia sp. H160] Length = 351 Score = 278 bits (711), Expect = 6e-73, Method: Composition-based stats. Identities = 152/244 (62%), Positives = 200/244 (81%) Query: 5 LPLVLYALTRYVDLQALAMPWQILLTLLIVVPMGPMIYRVAYQPLAHSSVLVLLIVSLGV 64 P+ +YALTR + LQ L M QI LTLLIV+PMGP +YR+AY+P+A ++ L+LLIV++ V Sbjct: 106 FPIAVYALTRGIFLQPLPMIVQIALTLLIVIPMGPFVYRLAYEPIAEATTLLLLIVAVAV 165 Query: 65 HLAMVGLGLLMFGPEGTNTKPFTEMQFNLGESPVSGQSVIVLVTVAALIAVIYVFFERTL 124 H AMVGLGL+MFG EG+ T F++ FN+G +SGQS+ V+ T LI +Y++F+R++ Sbjct: 166 HFAMVGLGLVMFGAEGSRTNAFSDTTFNIGTLSISGQSLWVIGTAVVLIGALYLYFDRSI 225 Query: 125 TGKALRATAVNRLGARLVGVGINQAGKLSFAMSAGIGALCGILIAPFTIVNYESGFIIAL 184 +GKALRAT+VNRLGARLVG+G QAG+L+F ++AG+GALCGIL+AP T + Y+SGF+I L Sbjct: 226 SGKALRATSVNRLGARLVGIGTTQAGRLAFTLAAGLGALCGILVAPLTTIYYDSGFLIGL 285 Query: 185 KGFVGAIFGGLASYPIAALGSVSVGLIESFSSFWASAFKELIVFTVIIPILLWRSLTSHH 244 KGFVGAI GGL SYP+AA GS+ VGL+ES+SSFWASA+KE+IVFT+IIP+LLWRSL S H Sbjct: 286 KGFVGAIIGGLVSYPLAAAGSILVGLLESYSSFWASAYKEVIVFTLIIPVLLWRSLASPH 345 Query: 245 IDEE 248 +EE Sbjct: 346 AEEE 349