BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2403.p (277 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777496.1| branched-chain amino acid ABC transporter AT... 412 e-113 ref|YP_003606669.1| ABC transporter [Burkholderia sp. CCGE1002] ... 318 6e-85 ref|ZP_03264651.1| ABC transporter related [Burkholderia sp. H16... 317 1e-84 ref|ZP_06840382.1| ABC transporter related protein [Burkholderia... 317 1e-84 ref|YP_560952.1| branched chain amino acid ABC transporter ATPas... 316 2e-84 >ref|YP_003777496.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ65588.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 269 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 240/264 (90%), Positives = 251/264 (95%) Query: 1 MMTAATIMNAASVESEVRAASAPLLLEVSGLSARYGKVPALTEAALSLRAGQIVTVIGPN 60 MMTAAT+M AS E EVRA +AP+LLEVSGLSARYGKV ALT+ ALSLRAGQIVTVIGPN Sbjct: 1 MMTAATVMPHASAEPEVRATTAPVLLEVSGLSARYGKVAALTDTALSLRAGQIVTVIGPN 60 Query: 61 GAGKSTLLNAMMGAMPAGAAASGRIAFQGEDVSQMEVEERVARGLSLVPEKRELFTSMSV 120 GAGKSTLLNAMMGA+P+GAAASGRIAFQGEDVSQMEVEERVARGLSLVPEKRELFT+M+V Sbjct: 61 GAGKSTLLNAMMGALPSGAAASGRIAFQGEDVSQMEVEERVARGLSLVPEKRELFTTMTV 120 Query: 121 EDNLLLGAYKRRRNGESGYLDQQEFVYALFPRLKERRKQAAGTLSGGERQMLAVGRALMA 180 EDNLLLGAYKR RNGESGYLDQQ+FVY LFPRLKERRKQAAGTLSGGERQMLAVGRALMA Sbjct: 121 EDNLLLGAYKRHRNGESGYLDQQDFVYTLFPRLKERRKQAAGTLSGGERQMLAVGRALMA 180 Query: 181 KPQVLMLDEPSLGLAPLITKEILSIISQLRSTGVATLLVEQNARAALQVAEYGYVLEMGE 240 KPQVLMLDEPSLGLAPLIT+EILSIISQLRSTGVATLLVEQNARAALQVA+YGYVLEMGE Sbjct: 181 KPQVLMLDEPSLGLAPLITREILSIISQLRSTGVATLLVEQNARAALQVADYGYVLEMGE 240 Query: 241 IVCEGPAGVLAADKRIVESYLGVA 264 IVC GPAGVLA D RIVESYLGV Sbjct: 241 IVCAGPAGVLAEDSRIVESYLGVG 264 >ref|YP_003606669.1| ABC transporter [Burkholderia sp. CCGE1002] gb|ADG17158.1| ABC transporter related protein [Burkholderia sp. CCGE1002] Length = 259 Score = 318 bits (815), Expect = 6e-85, Method: Composition-based stats. Identities = 177/247 (71%), Positives = 206/247 (83%) Query: 20 ASAPLLLEVSGLSARYGKVPALTEAALSLRAGQIVTVIGPNGAGKSTLLNAMMGAMPAGA 79 A+A +LEV LS RYGKV AL AA+ +RAGQIV+VIGPNGAGKSTLLNA+MGA+P Sbjct: 11 AAAGSILEVDHLSVRYGKVEALHNAAIKVRAGQIVSVIGPNGAGKSTLLNAIMGALPTSG 70 Query: 80 AASGRIAFQGEDVSQMEVEERVARGLSLVPEKRELFTSMSVEDNLLLGAYKRRRNGESGY 139 A G I++QGEDV M VE+RVA G+ LVPEKRELF SM+VEDNLLLGAY+R+R GE + Sbjct: 71 HAKGVISYQGEDVGAMPVEKRVALGMCLVPEKRELFASMTVEDNLLLGAYRRKRAGERNF 130 Query: 140 LDQQEFVYALFPRLKERRKQAAGTLSGGERQMLAVGRALMAKPQVLMLDEPSLGLAPLIT 199 LDQ E V+ LFPRLKERRKQAAGTLSGGERQMLAVGRALM KP +LMLDEPSLGLAPLI Sbjct: 131 LDQLEPVFELFPRLKERRKQAAGTLSGGERQMLAVGRALMGKPDLLMLDEPSLGLAPLIV 190 Query: 200 KEILSIISQLRSTGVATLLVEQNARAALQVAEYGYVLEMGEIVCEGPAGVLAADKRIVES 259 KEI IIS LR TGVATLL+EQNARAALQ+++YGYVLE GE+ EGPA LA + R++E+ Sbjct: 191 KEIFHIISALRQTGVATLLIEQNARAALQISDYGYVLETGELALEGPAADLAQNPRVIET 250 Query: 260 YLGVARE 266 YLG+A++ Sbjct: 251 YLGLAKK 257 >ref|ZP_03264651.1| ABC transporter related [Burkholderia sp. H160] gb|EEA03808.1| ABC transporter related [Burkholderia sp. H160] Length = 259 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 173/241 (71%), Positives = 202/241 (83%) Query: 25 LLEVSGLSARYGKVPALTEAALSLRAGQIVTVIGPNGAGKSTLLNAMMGAMPAGAAASGR 84 +LEV LS RYGKV AL A+ +RAGQIV+VIGPNGAGKSTLLNA+MGA+P A G Sbjct: 16 ILEVDHLSVRYGKVEALHNVAIKVRAGQIVSVIGPNGAGKSTLLNAIMGALPTSGHAKGA 75 Query: 85 IAFQGEDVSQMEVEERVARGLSLVPEKRELFTSMSVEDNLLLGAYKRRRNGESGYLDQQE 144 I +QG+DVS + VE+RVA G+ LVPEKRELF SM+VEDNLLLGAY+R+R GE +LDQ E Sbjct: 76 ITYQGDDVSAVPVEKRVALGMCLVPEKRELFASMTVEDNLLLGAYRRKRAGERNFLDQLE 135 Query: 145 FVYALFPRLKERRKQAAGTLSGGERQMLAVGRALMAKPQVLMLDEPSLGLAPLITKEILS 204 V+ LFPRLKERRKQAAGTLSGGERQMLAVGRALM KP +LMLDEPSLGLAPLI KEI Sbjct: 136 PVFELFPRLKERRKQAAGTLSGGERQMLAVGRALMGKPDLLMLDEPSLGLAPLIVKEIFH 195 Query: 205 IISQLRSTGVATLLVEQNARAALQVAEYGYVLEMGEIVCEGPAGVLAADKRIVESYLGVA 264 IIS LR TGVATLL+EQNARAALQ+++YGYVLE GE+ EGPA LA ++R++E+YLG+A Sbjct: 196 IISALRRTGVATLLIEQNARAALQISDYGYVLETGELALEGPATDLAHNQRVIETYLGLA 255 Query: 265 R 265 + Sbjct: 256 K 256 >ref|ZP_06840382.1| ABC transporter related protein [Burkholderia sp. Ch1-1] gb|EFG72102.1| ABC transporter related protein [Burkholderia sp. Ch1-1] Length = 250 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 175/246 (71%), Positives = 207/246 (84%) Query: 21 SAPLLLEVSGLSARYGKVPALTEAALSLRAGQIVTVIGPNGAGKSTLLNAMMGAMPAGAA 80 +A +L+V GLS RYGKV AL AA+ +RAGQIV+VIGPNGAGKSTLLNA+MGA+P Sbjct: 3 AAGPILDVGGLSVRYGKVEALHGAAIKVRAGQIVSVIGPNGAGKSTLLNAIMGALPTTGH 62 Query: 81 ASGRIAFQGEDVSQMEVEERVARGLSLVPEKRELFTSMSVEDNLLLGAYKRRRNGESGYL 140 A G + +QGEDVS + VE+RVARG+ LVPEKRELF SM+VEDNL+LGAY+R+R GE +L Sbjct: 63 AKGTVLYQGEDVSAVPVEKRVARGMCLVPEKRELFASMTVEDNLVLGAYRRKRAGERNFL 122 Query: 141 DQQEFVYALFPRLKERRKQAAGTLSGGERQMLAVGRALMAKPQVLMLDEPSLGLAPLITK 200 DQ E V+ LFPRLKERRKQAAGTLSGGERQMLAVGRALM KP +LMLDEPSLGLAPLI K Sbjct: 123 DQLEPVFTLFPRLKERRKQAAGTLSGGERQMLAVGRALMGKPDLLMLDEPSLGLAPLIVK 182 Query: 201 EILSIISQLRSTGVATLLVEQNARAALQVAEYGYVLEMGEIVCEGPAGVLAADKRIVESY 260 EI IIS LR TGVATLL+EQNARAALQ+++YGYVLE GE+ EGPA LA + R++E+Y Sbjct: 183 EIFHIISALRQTGVATLLIEQNARAALQISDYGYVLETGELALEGPAADLAQNPRVIETY 242 Query: 261 LGVARE 266 LG+A++ Sbjct: 243 LGLAKK 248 >ref|YP_560952.1| branched chain amino acid ABC transporter ATPase [Burkholderia xenovorans LB400] gb|ABE32900.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [Burkholderia xenovorans LB400] Length = 254 Score = 316 bits (810), Expect = 2e-84, Method: Composition-based stats. Identities = 175/246 (71%), Positives = 207/246 (84%) Query: 21 SAPLLLEVSGLSARYGKVPALTEAALSLRAGQIVTVIGPNGAGKSTLLNAMMGAMPAGAA 80 +A +L+V GLS RYGKV AL AA+ +RAGQIV+VIGPNGAGKSTLLNA+MGA+P Sbjct: 7 AAGPILDVDGLSVRYGKVEALHGAAIKVRAGQIVSVIGPNGAGKSTLLNAIMGALPTTGH 66 Query: 81 ASGRIAFQGEDVSQMEVEERVARGLSLVPEKRELFTSMSVEDNLLLGAYKRRRNGESGYL 140 A G + +QGEDVS + VE+RVARG+ LVPEKRELF SM+VEDNL+LGAY+R+R GE +L Sbjct: 67 AKGAVLYQGEDVSAVPVEKRVARGMCLVPEKRELFASMTVEDNLVLGAYRRKRAGERNFL 126 Query: 141 DQQEFVYALFPRLKERRKQAAGTLSGGERQMLAVGRALMAKPQVLMLDEPSLGLAPLITK 200 DQ E V+ LFPRLKERRKQAAGTLSGGERQMLAVGRALM KP +LMLDEPSLGLAPLI K Sbjct: 127 DQLEPVFTLFPRLKERRKQAAGTLSGGERQMLAVGRALMGKPDLLMLDEPSLGLAPLIVK 186 Query: 201 EILSIISQLRSTGVATLLVEQNARAALQVAEYGYVLEMGEIVCEGPAGVLAADKRIVESY 260 EI IIS LR TGVATLL+EQNARAALQ+++YGYVLE GE+ EGPA LA + R++E+Y Sbjct: 187 EIFHIISALRQTGVATLLIEQNARAALQISDYGYVLETGELALEGPAAELAQNPRVIETY 246 Query: 261 LGVARE 266 LG+A++ Sbjct: 247 LGLAKK 252