BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2402.p (441 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777495.1| hypothetical protein Hsero_4117 [Herbaspiril... 705 0.0 ref|YP_003167949.1| filamentation induced by cAMP protein Fic [C... 574 e-161 ref|NP_842494.1| hypothetical protein NE2505 [Nitrosomonas europ... 557 e-156 ref|YP_001774220.1| filamentation induced by cAMP protein Fic [B... 556 e-156 ref|ZP_04943708.1| hypothetical protein BCPG_05281 [Burkholderia... 555 e-156 >ref|YP_003777495.1| hypothetical protein Hsero_4117 [Herbaspirillum seropedicae SmR1] gb|ADJ65587.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 373 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 356/373 (95%), Positives = 364/373 (97%) Query: 69 MNRGDYTYLWQAPDWPRWRYDLNVLAAPLAEVSHAQGLLLGRLADVGLGLRDEANLLALT 128 MN GDYTYLWQAPDWP WRYDLN+LA PLA+VSHAQG+LLGRLADVGLGLRDEANLLALT Sbjct: 1 MNSGDYTYLWQAPDWPHWRYDLNILAEPLAQVSHAQGVLLGRLADVGLGLRDEANLLALT 60 Query: 129 EDVLKTSAIEGEQLNLASVRSSVARRLGVDIGALAPVDRHVEGVVDMIFDATTHHRKPLT 188 +DVLKTSAIEGEQLNLASVRSSVARRLGVDIGALAPVDRHVEGVVDMIFDATTHH KPLT Sbjct: 61 DDVLKTSAIEGEQLNLASVRSSVARRLGVDIGALAPVDRHVEGVVDMIFDATTHHHKPLT 120 Query: 189 AKRLFAWHAALFPTGYSGMSEIIVGDWRDDAQGPMQVVSGPLHRQKVHYEAPPARRLARE 248 AKRLFAWHAALFPTGYSG+SEIIVGDWRDDAQGPMQVVSGPLHRQKVHYEAPPARRLARE Sbjct: 121 AKRLFAWHAALFPTGYSGLSEIIVGDWRDDAQGPMQVVSGPLHRQKVHYEAPPARRLARE 180 Query: 249 VTRLLNWINTANPVEPALLRAGLGHLWFVTLHPFDDGNGRIARAIGDLLLARADGSPQRF 308 VTRLLNWINTA P EPALLRAGLGHLWFVTLHPFDDGNGRIARA+GDLLLARADGSPQRF Sbjct: 181 VTRLLNWINTAKPAEPALLRAGLGHLWFVTLHPFDDGNGRIARAVGDLLLARADGSPQRF 240 Query: 309 YSLSAQIQRERKAYYEILERTQKGDMDVTPWLLWFLQMLSAAVSQAHRTLDAVLVKARFW 368 YSLSAQIQRERKAYY+ILERTQKGDMDVTPWLLWFLQML AAV+QAHRTLDAVLVKARFW Sbjct: 241 YSLSAQIQRERKAYYDILERTQKGDMDVTPWLLWFLQMLLAAVNQAHRTLDAVLVKARFW 300 Query: 369 QRIAGTPLNGRQVKVLNRLLDGFEGKLTSSKWAALAKCSSDTALRDLNELVALDLLHRSA 428 QRIAGTPLN RQVKVLNRLLDGFEGKLTSSKWAALAKCSSDTALRDLNELVALDLL RSA Sbjct: 301 QRIAGTPLNVRQVKVLNRLLDGFEGKLTSSKWAALAKCSSDTALRDLNELVALDLLQRSA 360 Query: 429 AGGRSTSYELTLR 441 AGGRSTSYELTLR Sbjct: 361 AGGRSTSYELTLR 373 >ref|YP_003167949.1| filamentation induced by cAMP protein Fic [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV36020.1| filamentation induced by cAMP protein Fic [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 373 Score = 574 bits (1479), Expect = e-161, Method: Composition-based stats. Identities = 284/370 (76%), Positives = 318/370 (85%) Query: 69 MNRGDYTYLWQAPDWPRWRYDLNVLAAPLAEVSHAQGLLLGRLADVGLGLRDEANLLALT 128 MN DY Y WQAPDWP WRYDL+ LA P+A+VS AQGLLLGRLADVGLGLRDEA+L ALT Sbjct: 1 MNSSDYLYAWQAPDWPHWRYDLSALAEPMAQVSRAQGLLLGRLADVGLGLRDEASLAALT 60 Query: 129 EDVLKTSAIEGEQLNLASVRSSVARRLGVDIGALAPVDRHVEGVVDMIFDATTHHRKPLT 188 +DVLKTS IEGE LN+ASVRSS+ARRLGVDIG+LAPVDRHVEGVV+M+ DAT H PLT Sbjct: 61 DDVLKTSEIEGEHLNVASVRSSIARRLGVDIGSLAPVDRHVEGVVEMVLDATIRHGAPLT 120 Query: 189 AKRLFAWHAALFPTGYSGMSEIIVGDWRDDAQGPMQVVSGPLHRQKVHYEAPPARRLARE 248 RLFAWHAALFPTGYSG+++I G WR+DA GPMQVVSGP++RQ+VH+EAPPA RL E Sbjct: 121 PNRLFAWHAALFPTGYSGLTKITTGAWRNDALGPMQVVSGPMNRQRVHFEAPPADRLTTE 180 Query: 249 VTRLLNWINTANPVEPALLRAGLGHLWFVTLHPFDDGNGRIARAIGDLLLARADGSPQRF 308 ++ L W+N P +PAL+RAGLGHLWFVTLHPFDDGNGRIARA+GDLLLAR DGSPQRF Sbjct: 181 LSVFLRWLNDPAPSDPALIRAGLGHLWFVTLHPFDDGNGRIARAVGDLLLARTDGSPQRF 240 Query: 309 YSLSAQIQRERKAYYEILERTQKGDMDVTPWLLWFLQMLSAAVSQAHRTLDAVLVKARFW 368 YSLSAQIQRERKAYY+ILERTQKG MDVT WL WFL MLS A+ QAH LDAVL KARFW Sbjct: 241 YSLSAQIQRERKAYYDILERTQKGSMDVTEWLRWFLDMLSQALGQAHGVLDAVLFKARFW 300 Query: 369 QRIAGTPLNGRQVKVLNRLLDGFEGKLTSSKWAALAKCSSDTALRDLNELVALDLLHRSA 428 Q + G LN RQVKVLNRLLDGF+GKLT+SKWAALA CSSDTALRD+N+LV +L R+A Sbjct: 301 QGLQGATLNERQVKVLNRLLDGFQGKLTTSKWAALANCSSDTALRDINDLVERGILQRTA 360 Query: 429 AGGRSTSYEL 438 AGGRSTSY+L Sbjct: 361 AGGRSTSYDL 370 >ref|NP_842494.1| hypothetical protein NE2505 [Nitrosomonas europaea ATCC 19718] emb|CAD86417.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 374 Score = 557 bits (1436), Expect = e-156, Method: Composition-based stats. Identities = 281/371 (75%), Positives = 317/371 (85%), Gaps = 3/371 (0%) Query: 69 MNRGDYTYLWQAPDWPRWRYDLNVLAAPLAEVSHAQGLLLGRLADVGLGLRDEANLLALT 128 MN G+Y Y+WQA DWP WR+DL LA P+AEVS AQGLL+GRLADVG+ LRD+A+L ALT Sbjct: 1 MNSGEYKYIWQASDWPNWRFDLAALAEPMAEVSRAQGLLMGRLADVGMALRDQASLAALT 60 Query: 129 EDVLKTSAIEGEQLNLASVRSSVARRLGVDIGALAPVDRHVEGVVDMIFDATTHHRKPLT 188 EDV+KTS IEGEQLN+ SVRSS+ARRLGVDIGALAPVDRHVEGVV+M+ DAT + + ++ Sbjct: 61 EDVVKTSEIEGEQLNVESVRSSIARRLGVDIGALAPVDRHVEGVVEMVLDATANCQALVS 120 Query: 189 AKRLFAWHAALFPTGYSGMSEIIVGDWRDDAQGPMQVVSGPLHRQKVHYEAPPARRLARE 248 +RLF WHAALFPTGYSG+S+I VG WRDDA GPMQVVSGP+ RQ+VH+EAPPA RL E Sbjct: 121 RERLFGWHAALFPTGYSGLSKINVGGWRDDATGPMQVVSGPIGRQRVHFEAPPADRLETE 180 Query: 249 VTRLLNWIN-TANPVEPALLRAGLGHLWFVTLHPFDDGNGRIARAIGDLLLARADGSPQR 307 +R L+W+N T N EP LL+AGLGHLWFVTLHPFDDGNGRIARAIGDLLLARADGSPQR Sbjct: 181 TSRFLDWLNGTLN--EPPLLKAGLGHLWFVTLHPFDDGNGRIARAIGDLLLARADGSPQR 238 Query: 308 FYSLSAQIQRERKAYYEILERTQKGDMDVTPWLLWFLQMLSAAVSQAHRTLDAVLVKARF 367 FYSLSAQIQRERKAYY+ILERTQK MDVT WL WFL L AV QA TLDAVL KARF Sbjct: 239 FYSLSAQIQRERKAYYDILERTQKRSMDVTEWLAWFLDTLHRAVDQAQHTLDAVLTKARF 298 Query: 368 WQRIAGTPLNGRQVKVLNRLLDGFEGKLTSSKWAALAKCSSDTALRDLNELVALDLLHRS 427 WQR A TPLN RQVK+LN+LLDGFEGKLTSSKWAA+AKCS DTALRD+N+L+ +L +S Sbjct: 299 WQRWATTPLNERQVKLLNKLLDGFEGKLTSSKWAAIAKCSPDTALRDINDLLTRGVLRKS 358 Query: 428 AAGGRSTSYEL 438 AGGRSTSYEL Sbjct: 359 DAGGRSTSYEL 369 >ref|YP_001774220.1| filamentation induced by cAMP protein Fic [Burkholderia cenocepacia MC0-3] gb|ACA95725.1| filamentation induced by cAMP protein Fic [Burkholderia cenocepacia MC0-3] Length = 374 Score = 556 bits (1434), Expect = e-156, Method: Composition-based stats. Identities = 277/370 (74%), Positives = 313/370 (84%), Gaps = 1/370 (0%) Query: 69 MNRGDYTYLWQAPDWPRWRYDLNVLAAPLAEVSHAQGLLLGRLADVGLGLRDEANLLALT 128 M GDYT++W+A DWP WR+DL LA PLA+VS AQG+L GRLADVGLGLRDEA+L ALT Sbjct: 1 MMSGDYTFIWEAADWPAWRFDLPALATPLADVSRAQGMLAGRLADVGLGLRDEASLAALT 60 Query: 129 EDVLKTSAIEGEQLNLASVRSSVARRLGVDIGALAPVDRHVEGVVDMIFDATTHHRKPLT 188 +DV+KTSAIEGE LN+ASVRSS+ARRLGVDIGALAPVDRHVEGVVDM+ DATTH P+T Sbjct: 61 DDVVKTSAIEGENLNVASVRSSIARRLGVDIGALAPVDRHVEGVVDMVLDATTHSAAPVT 120 Query: 189 AKRLFAWHAALFPTGYSGMSEIIVGDWRDDAQGPMQVVSGPLHRQKVHYEAPPARRLARE 248 RLF WHAALFPTGYSG+S I VG WR DA GPMQVVSGP+ RQ+VH+EAPPA R+ E Sbjct: 121 EARLFGWHAALFPTGYSGLSRITVGRWRTDASGPMQVVSGPIGRQRVHFEAPPAARVPDE 180 Query: 249 VTRLLNWINTANPVEPALLRAGLGHLWFVTLHPFDDGNGRIARAIGDLLLARADGSPQRF 308 + R L W+N A P EP L+RAGL HLWFVTLHPFDDGNGRIARA+GDL+LARAD SPQRF Sbjct: 181 IGRFLAWLN-APPAEPLLIRAGLAHLWFVTLHPFDDGNGRIARALGDLVLARADRSPQRF 239 Query: 309 YSLSAQIQRERKAYYEILERTQKGDMDVTPWLLWFLQMLSAAVSQAHRTLDAVLVKARFW 368 YSLSAQIQRER AYY++LERTQ+G +DVT WL WFL L A+ AH TLDAVL+KARFW Sbjct: 240 YSLSAQIQRERNAYYDVLERTQRGSLDVTEWLAWFLNTLGRAIDHAHTTLDAVLIKARFW 299 Query: 369 QRIAGTPLNGRQVKVLNRLLDGFEGKLTSSKWAALAKCSSDTALRDLNELVALDLLHRSA 428 QR AG +N RQVKV+NRLLDGFEGKLT++KWAALAKCS DTALRD+ ELV +L RSA Sbjct: 300 QRCAGVAMNERQVKVMNRLLDGFEGKLTTTKWAALAKCSQDTALRDITELVEQGMLRRSA 359 Query: 429 AGGRSTSYEL 438 +GGRSTSYEL Sbjct: 360 SGGRSTSYEL 369 >ref|ZP_04943708.1| hypothetical protein BCPG_05281 [Burkholderia cenocepacia PC184] gb|EAY66879.1| hypothetical protein BCPG_05281 [Burkholderia cenocepacia PC184] Length = 374 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 277/370 (74%), Positives = 312/370 (84%), Gaps = 1/370 (0%) Query: 69 MNRGDYTYLWQAPDWPRWRYDLNVLAAPLAEVSHAQGLLLGRLADVGLGLRDEANLLALT 128 M GDYT++W+A DWP WR+DL LA PLA+VS AQG+L GRLADVGL LRDEA+L ALT Sbjct: 1 MMSGDYTFIWEAADWPAWRFDLPALATPLADVSRAQGMLAGRLADVGLALRDEASLAALT 60 Query: 129 EDVLKTSAIEGEQLNLASVRSSVARRLGVDIGALAPVDRHVEGVVDMIFDATTHHRKPLT 188 +DV+KTSAIEGE LN+ASVRSS+ARRLGVDIGALAPVDRHVEGVVDM+ DATTH P+T Sbjct: 61 DDVVKTSAIEGESLNVASVRSSIARRLGVDIGALAPVDRHVEGVVDMVLDATTHSAAPVT 120 Query: 189 AKRLFAWHAALFPTGYSGMSEIIVGDWRDDAQGPMQVVSGPLHRQKVHYEAPPARRLARE 248 RLF WHAALFPTGYSG+S I VG WR DA GPMQVVSGP+ RQ+VH+EAPPA R+ E Sbjct: 121 EARLFGWHAALFPTGYSGLSRITVGGWRTDASGPMQVVSGPIGRQRVHFEAPPAARVPDE 180 Query: 249 VTRLLNWINTANPVEPALLRAGLGHLWFVTLHPFDDGNGRIARAIGDLLLARADGSPQRF 308 + R L W+N A P EP L+RAGL HLWFVTLHPFDDGNGRIARA+GDL+LARAD SPQRF Sbjct: 181 IRRFLAWLN-APPAEPLLIRAGLAHLWFVTLHPFDDGNGRIARALGDLVLARADRSPQRF 239 Query: 309 YSLSAQIQRERKAYYEILERTQKGDMDVTPWLLWFLQMLSAAVSQAHRTLDAVLVKARFW 368 YSLSAQIQRER AYY++LERTQ+G +DVT WL WFL L A+ AH TLDAVL+KARFW Sbjct: 240 YSLSAQIQRERNAYYDVLERTQRGSLDVTEWLAWFLNTLGRAIDHAHTTLDAVLIKARFW 299 Query: 369 QRIAGTPLNGRQVKVLNRLLDGFEGKLTSSKWAALAKCSSDTALRDLNELVALDLLHRSA 428 QR AG +N RQVKV+NRLLDGFEGKLT+SKWAALAKCS DTALRD+ ELV +L RSA Sbjct: 300 QRCAGVAMNERQVKVMNRLLDGFEGKLTTSKWAALAKCSQDTALRDITELVEQGMLRRSA 359 Query: 429 AGGRSTSYEL 438 +GGRSTSYEL Sbjct: 360 SGGRSTSYEL 369