BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2398.p (420 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777492.1| allophanate hydrolase subunit 1 [Herbaspiril... 546 e-153 ref|NP_249186.1| hypothetical protein PA0495 [Pseudomonas aerugi... 471 e-130 ref|ZP_04936911.1| hypothetical protein PA2G_04412 [Pseudomonas ... 470 e-130 ref|ZP_01363399.1| hypothetical protein PaerPA_01000493 [Pseudom... 469 e-130 ref|ZP_04930603.1| hypothetical protein PACG_03344 [Pseudomonas ... 468 e-129 >ref|YP_003777492.1| allophanate hydrolase subunit 1 [Herbaspirillum seropedicae SmR1] gb|ADJ65584.1| allophanate hydrolase subunit 1 protein [Herbaspirillum seropedicae SmR1] Length = 299 Score = 546 bits (1408), Expect = e-153, Method: Composition-based stats. Identities = 279/299 (93%), Positives = 290/299 (96%) Query: 122 MNRTQASPATPIRYSIAGDEHLFAEVSESMSLEAFFRAMAITRAVEQLALPGVLDVCLAN 181 MNR Q +P TPIRYSIAGDEHLFAEVSESMSLEAFFRAMAITRAVE+LALPGVLDVCLAN Sbjct: 1 MNRLQTTPVTPIRYSIAGDEHLFAEVSESMSLEAFFRAMAITRAVEKLALPGVLDVCLAN 60 Query: 182 ASFQIRFDPDLIHPLALLEQVKALESSTTAERRIDTRIIEVPVLYDDPWTNETQARFRDR 241 ASFQIRF+PDLIHPLALLEQ++ALESSTTAERRIDTRIIEVPVLYDDPWTNETQ+RFRDR Sbjct: 61 ASFQIRFNPDLIHPLALLEQLEALESSTTAERRIDTRIIEVPVLYDDPWTNETQSRFRDR 120 Query: 242 HQDPASTDLQYAARINGYEEVQAFIAAHSGTPWFVSMVGFVAGLPFMYQMVEQDRQLQVP 301 HQDP+STDLQYAARINGY+E QAFIAAHSGTPWFVSMVGFVAGLPFMYQMVEQDRQLQVP Sbjct: 121 HQDPSSTDLQYAARINGYDETQAFIAAHSGTPWFVSMVGFVAGLPFMYQMVEQDRQLQVP 180 Query: 302 KYLRPRTDTPKLTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIYDPQQGLPYLQESMVFFR 361 KYLRPRTDTPKLTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIYDPQQGLPYL+ESMVFFR Sbjct: 181 KYLRPRTDTPKLTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIYDPQQGLPYLRESMVFFR 240 Query: 362 AGDIVQFKAIDRSAYDAAIAAVDAGRFDLRIRPARFDLDAFQADPQACIHALKEALHDD 420 AGDIVQFK IDR+AYDAAI V+AGRFDLRIR RFDLDAFQADPQACIHALKEALHDD Sbjct: 241 AGDIVQFKPIDRTAYDAAIVEVEAGRFDLRIRAVRFDLDAFQADPQACIHALKEALHDD 299 >ref|NP_249186.1| hypothetical protein PA0495 [Pseudomonas aeruginosa PAO1] gb|AAG03884.1|AE004486_13 hypothetical protein PA0495 [Pseudomonas aeruginosa PAO1] Length = 292 Score = 471 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 225/288 (78%), Positives = 251/288 (87%) Query: 133 IRYSIAGDEHLFAEVSESMSLEAFFRAMAITRAVEQLALPGVLDVCLANASFQIRFDPDL 192 IRYS GDEHLFAEV+E+MSLEAFFR MAITRA+E L LPGVLDVCLANASFQ+RFDPD Sbjct: 5 IRYSFGGDEHLFAEVAEAMSLEAFFRGMAITRAIEALQLPGVLDVCLANASFQVRFDPDR 64 Query: 193 IHPLALLEQVKALESSTTAERRIDTRIIEVPVLYDDPWTNETQARFRDRHQDPASTDLQY 252 + P ALLE V+ LE+ A R I+TRI+EVPVLY+DPWT+ET RFRDRHQDP STDL+Y Sbjct: 65 LAPQALLETVRGLEAEAVAARSIETRIVEVPVLYNDPWTHETLMRFRDRHQDPDSTDLEY 124 Query: 253 AARINGYEEVQAFIAAHSGTPWFVSMVGFVAGLPFMYQMVEQDRQLQVPKYLRPRTDTPK 312 AARINGY +VQAFI AHSGTPWFVSMVGFVAGLPFMYQMVE++RQLQVPKYLRPR DTPK Sbjct: 125 AARINGYADVQAFIQAHSGTPWFVSMVGFVAGLPFMYQMVERERQLQVPKYLRPRIDTPK 184 Query: 313 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIYDPQQGLPYLQESMVFFRAGDIVQFKAID 372 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPI+DP+QGLPYL+ESMVFFRAGDIVQF+ I+ Sbjct: 185 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIFDPRQGLPYLEESMVFFRAGDIVQFRPIE 244 Query: 373 RSAYDAAIAAVDAGRFDLRIRPARFDLDAFQADPQACIHALKEALHDD 420 R+ Y+ A V++G FDLRIRP FDLDAF ADP+ C L+E LH D Sbjct: 245 RTEYEHMAAEVESGTFDLRIRPVSFDLDAFLADPRGCTQHLQEVLHVD 292 >ref|ZP_04936911.1| hypothetical protein PA2G_04412 [Pseudomonas aeruginosa 2192] gb|EAZ61030.1| hypothetical protein PA2G_04412 [Pseudomonas aeruginosa 2192] gb|EGM16952.1| putative hydrolase [Pseudomonas aeruginosa 138244] dbj|GAA19414.1| putative hydrolase [Pseudomonas aeruginosa NCMG1179] gb|AEO72983.1| putative hydrolase [Pseudomonas aeruginosa M18] Length = 292 Score = 470 bits (1209), Expect = e-130, Method: Composition-based stats. Identities = 226/288 (78%), Positives = 250/288 (86%) Query: 133 IRYSIAGDEHLFAEVSESMSLEAFFRAMAITRAVEQLALPGVLDVCLANASFQIRFDPDL 192 IRYS GDEHLFAEV+ESMSLEAFFR MAITRA+E L LPGVLDVCLANASFQ+RFDPD Sbjct: 5 IRYSFGGDEHLFAEVAESMSLEAFFRGMAITRAIETLQLPGVLDVCLANASFQVRFDPDR 64 Query: 193 IHPLALLEQVKALESSTTAERRIDTRIIEVPVLYDDPWTNETQARFRDRHQDPASTDLQY 252 + P ALLE V+ LE A R I+TRI+EVPVLY+DPWT+ET RFRDRHQDP STDL+Y Sbjct: 65 LAPQALLETVRGLEVEAVAARSIETRIVEVPVLYNDPWTHETLMRFRDRHQDPDSTDLEY 124 Query: 253 AARINGYEEVQAFIAAHSGTPWFVSMVGFVAGLPFMYQMVEQDRQLQVPKYLRPRTDTPK 312 AARINGY +VQAFI AHSGTPWFVSMVGFVAGLPFMYQMVE++RQLQVPKYLRPR DTPK Sbjct: 125 AARINGYADVQAFIQAHSGTPWFVSMVGFVAGLPFMYQMVERERQLQVPKYLRPRIDTPK 184 Query: 313 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIYDPQQGLPYLQESMVFFRAGDIVQFKAID 372 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPI+DP+QGLPYL+ESMVFFRAGDIVQF+ I+ Sbjct: 185 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIFDPRQGLPYLEESMVFFRAGDIVQFRPIE 244 Query: 373 RSAYDAAIAAVDAGRFDLRIRPARFDLDAFQADPQACIHALKEALHDD 420 R+ Y+ A V+AG FDLRIRP FDLDAF ADP+ C L+E L+ D Sbjct: 245 RTEYERMAAEVEAGTFDLRIRPVSFDLDAFLADPRGCTQHLQEVLYVD 292 >ref|ZP_01363399.1| hypothetical protein PaerPA_01000493 [Pseudomonas aeruginosa PACS2] Length = 292 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 226/288 (78%), Positives = 250/288 (86%) Query: 133 IRYSIAGDEHLFAEVSESMSLEAFFRAMAITRAVEQLALPGVLDVCLANASFQIRFDPDL 192 IRYS GDEHLFAEV+ESMSLEAFFR MAITRA+E L LPGVLDVCLANASFQ+RFDPD Sbjct: 5 IRYSFGGDEHLFAEVAESMSLEAFFRGMAITRAIETLQLPGVLDVCLANASFQVRFDPDR 64 Query: 193 IHPLALLEQVKALESSTTAERRIDTRIIEVPVLYDDPWTNETQARFRDRHQDPASTDLQY 252 + P ALLE V+ LE A R I+TRI+EVPVLY+DPWT+ET RFRDRHQDP STDL+Y Sbjct: 65 LAPQALLETVRGLEVEAVAARSIETRIVEVPVLYNDPWTHETLMRFRDRHQDPDSTDLEY 124 Query: 253 AARINGYEEVQAFIAAHSGTPWFVSMVGFVAGLPFMYQMVEQDRQLQVPKYLRPRTDTPK 312 AARINGY +VQAFI AHSGTPWFVSMVGFVAGLPFMYQMVE++RQLQVPKYLRPR DTPK Sbjct: 125 AARINGYADVQAFIQAHSGTPWFVSMVGFVAGLPFMYQMVERERQLQVPKYLRPRIDTPK 184 Query: 313 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIYDPQQGLPYLQESMVFFRAGDIVQFKAID 372 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPI+DP+QGLPYL+ESMVFFRAGDIVQF+ I+ Sbjct: 185 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIFDPRQGLPYLEESMVFFRAGDIVQFRPIE 244 Query: 373 RSAYDAAIAAVDAGRFDLRIRPARFDLDAFQADPQACIHALKEALHDD 420 R+ Y+ A V+AG FDLRIRP FDLDAF ADP+ C L+E L+ D Sbjct: 245 RTEYERMAAEVEAGTFDLRIRPVSFDLDAFLADPRDCTQHLQEVLYVD 292 >ref|ZP_04930603.1| hypothetical protein PACG_03344 [Pseudomonas aeruginosa C3719] gb|EAZ54722.1| hypothetical protein PACG_03344 [Pseudomonas aeruginosa C3719] Length = 292 Score = 468 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 225/288 (78%), Positives = 251/288 (87%) Query: 133 IRYSIAGDEHLFAEVSESMSLEAFFRAMAITRAVEQLALPGVLDVCLANASFQIRFDPDL 192 IRYS GDEHLFAEV+E+MSLEAFFR MAITRA+E L LPGVLDVCLANASFQ+RFDPD Sbjct: 5 IRYSFGGDEHLFAEVAEAMSLEAFFRGMAITRAIEALQLPGVLDVCLANASFQVRFDPDR 64 Query: 193 IHPLALLEQVKALESSTTAERRIDTRIIEVPVLYDDPWTNETQARFRDRHQDPASTDLQY 252 + P ALLE V+ LE+ A R I+TRI+EVPVLY+DPWT+ET RFRDRHQDP STDL+Y Sbjct: 65 LAPQALLETVRGLEAEAVAARSIETRIVEVPVLYNDPWTHETLMRFRDRHQDPDSTDLEY 124 Query: 253 AARINGYEEVQAFIAAHSGTPWFVSMVGFVAGLPFMYQMVEQDRQLQVPKYLRPRTDTPK 312 AARINGY +VQAFI AHSGTPWFVSMVGFVAGLPFMYQMVE++RQLQVPKYLRPR DTPK Sbjct: 125 AARINGYADVQAFIQAHSGTPWFVSMVGFVAGLPFMYQMVERERQLQVPKYLRPRIDTPK 184 Query: 313 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIYDPQQGLPYLQESMVFFRAGDIVQFKAID 372 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPI+DP+QGLPYL+ESMVFFRAGDIVQF+ I+ Sbjct: 185 LTLGHGGCFGCIYSVRGAGGYQMFGVTPAPIFDPRQGLPYLEESMVFFRAGDIVQFRPIE 244 Query: 373 RSAYDAAIAAVDAGRFDLRIRPARFDLDAFQADPQACIHALKEALHDD 420 R+ Y+ A V+AG FDLRIRP FDLDAF ADP+ C L+E L+ D Sbjct: 245 RTEYERMAAEVEAGTFDLRIRPVSFDLDAFLADPRGCTQHLQEVLYVD 292