BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2396.p         (82 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777490.1| biotin carboxyl carrier protein [Herbaspiril...   140   7e-32
ref|NP_249184.1| hypothetical protein PA0493 [Pseudomonas aerugi...   103   6e-21
ref|ZP_06876492.1| hypothetical protein PaerPAb_02617 [Pseudomon...   102   1e-20
gb|AAT50671.1| PA0493 [synthetic construct]                           102   2e-20
ref|YP_001345991.1| hypothetical protein PSPA7_0596 [Pseudomonas...   102   2e-20

>ref|YP_003777490.1| biotin carboxyl carrier protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ65582.1| biotin carboxyl carrier protein [Herbaspirillum seropedicae SmR1]
          Length = 82

 Score =  140 bits (353), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 77/82 (93%), Positives = 79/82 (96%)

Query: 1  MAVHEVHSPLPGTFYRRSSPDAPPYAEAGDVIEAGRVIGLIEVMKQFTELQAEQGGKLLA 60
          MAVHEV SPLPGTFYRRSSPDAPPYAEAG++IEAGRVIGLIEVMKQFTELQAE GGKL A
Sbjct: 1  MAVHEVQSPLPGTFYRRSSPDAPPYAEAGELIEAGRVIGLIEVMKQFTELQAEHGGKLQA 60

Query: 61 FHVGNGDPVEPGQLVAVIETAD 82
          FHVGNGDPVEPGQLVAVIETAD
Sbjct: 61 FHVGNGDPVEPGQLVAVIETAD 82


>ref|NP_249184.1| hypothetical protein PA0493 [Pseudomonas aeruginosa PAO1]
 ref|ZP_01363397.1| hypothetical protein PaerPA_01000491 [Pseudomonas aeruginosa
          PACS2]
 ref|YP_788666.1| hypothetical protein PA14_06430 [Pseudomonas aeruginosa
          UCBPP-PA14]
 ref|YP_002438097.1| hypothetical protein PLES_04891 [Pseudomonas aeruginosa LESB58]
 ref|ZP_04930605.1| hypothetical protein PACG_03346 [Pseudomonas aeruginosa C3719]
 ref|ZP_04936909.1| hypothetical protein PA2G_04410 [Pseudomonas aeruginosa 2192]
 ref|ZP_07797668.1| putative biotin-requiring enzyme [Pseudomonas aeruginosa 39016]
 gb|AAG03882.1|AE004486_11 probable biotin-requiring enzyme [Pseudomonas aeruginosa PAO1]
 gb|ABJ15458.1| putative biotin-requiring enzyme [Pseudomonas aeruginosa
          UCBPP-PA14]
 gb|EAZ54724.1| hypothetical protein PACG_03346 [Pseudomonas aeruginosa C3719]
 gb|EAZ61028.1| hypothetical protein PA2G_04410 [Pseudomonas aeruginosa 2192]
 emb|CAW25216.1| probable biotin-requiring enzyme [Pseudomonas aeruginosa LESB58]
 gb|EFQ42764.1| putative biotin-requiring enzyme [Pseudomonas aeruginosa 39016]
 gb|EGM16950.1| hypothetical protein PA13_18864 [Pseudomonas aeruginosa 138244]
 dbj|GAA19416.1| probable biotin-requiring enzyme [Pseudomonas aeruginosa
          NCMG1179]
 gb|AEO72981.1| hypothetical protein PAM18_0492 [Pseudomonas aeruginosa M18]
 dbj|BAK92514.1| hypothetical protein NCGM2_5703 [Pseudomonas aeruginosa NCGM2.S1]
          Length = 82

 Score =  103 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 56/81 (69%), Positives = 67/81 (82%)

Query: 1  MAVHEVHSPLPGTFYRRSSPDAPPYAEAGDVIEAGRVIGLIEVMKQFTELQAEQGGKLLA 60
          MA H V SPLPGTFYR++SPDAPPYAE G  +EAG VIGLIEVMKQF+E+QA Q G L A
Sbjct: 1  MAEHNVQSPLPGTFYRKASPDAPPYAEVGQAVEAGSVIGLIEVMKQFSEVQAGQAGILQA 60

Query: 61 FHVGNGDPVEPGQLVAVIETA 81
          FHV +G+ +EPGQ++AVI +A
Sbjct: 61 FHVEDGEAIEPGQVLAVIASA 81


>ref|ZP_06876492.1| hypothetical protein PaerPAb_02617 [Pseudomonas aeruginosa PAb1]
 gb|EGM15146.1| hypothetical protein PA15_24754 [Pseudomonas aeruginosa 152504]
          Length = 82

 Score =  102 bits (255), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/81 (67%), Positives = 66/81 (81%)

Query: 1  MAVHEVHSPLPGTFYRRSSPDAPPYAEAGDVIEAGRVIGLIEVMKQFTELQAEQGGKLLA 60
          MA H V SPLPGTFYR++SPDAPPYAE G  +EAG VIGLIEVMKQF+E+QA Q G L  
Sbjct: 1  MAEHNVQSPLPGTFYRKASPDAPPYAEVGQAVEAGSVIGLIEVMKQFSEVQAGQAGILQV 60

Query: 61 FHVGNGDPVEPGQLVAVIETA 81
          FHV +G+ +EPGQ++AVI +A
Sbjct: 61 FHVEDGEAIEPGQVLAVIASA 81


>gb|AAT50671.1| PA0493 [synthetic construct]
          Length = 83

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 56/81 (69%), Positives = 66/81 (81%)

Query: 1  MAVHEVHSPLPGTFYRRSSPDAPPYAEAGDVIEAGRVIGLIEVMKQFTELQAEQGGKLLA 60
          MA H V SPLPGTFYR++SPDAPPYAE G  +EAG VIGLIEVMKQF+E+QA Q G L A
Sbjct: 1  MAEHNVQSPLPGTFYRKASPDAPPYAEVGQAVEAGSVIGLIEVMKQFSEVQAGQAGILQA 60

Query: 61 FHVGNGDPVEPGQLVAVIETA 81
          FHV +G+ +EPGQ +AVI +A
Sbjct: 61 FHVEDGEAIEPGQALAVIASA 81


>ref|YP_001345991.1| hypothetical protein PSPA7_0596 [Pseudomonas aeruginosa PA7]
 gb|ABR85822.1| probable biotin-requiring enzyme [Pseudomonas aeruginosa PA7]
          Length = 82

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/82 (67%), Positives = 67/82 (81%)

Query: 1  MAVHEVHSPLPGTFYRRSSPDAPPYAEAGDVIEAGRVIGLIEVMKQFTELQAEQGGKLLA 60
          MA H V SPLPGTFYR++SPDAPPYAE G  +EAG VIGLIEVMKQF+E+QA Q G L A
Sbjct: 1  MAEHNVQSPLPGTFYRKASPDAPPYAEVGQAVEAGSVIGLIEVMKQFSEVQAGQAGVLQA 60

Query: 61 FHVGNGDPVEPGQLVAVIETAD 82
          F V +G+ +EPGQ++AVI +A+
Sbjct: 61 FRVADGEAIEPGQVLAVIASAE 82