BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2395.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777489.1| LamB/YcsF family protein [Herbaspirillum ser... 488 e-136 ref|NP_249183.1| hypothetical protein PA0492 [Pseudomonas aerugi... 413 e-113 ref|YP_001345990.1| hypothetical protein PSPA7_0595 [Pseudomonas... 413 e-113 ref|ZP_06876491.1| hypothetical protein PaerPAb_02612 [Pseudomon... 413 e-113 ref|ZP_07797669.1| putative lactam utilization protein [Pseudomo... 412 e-113 >ref|YP_003777489.1| LamB/YcsF family protein [Herbaspirillum seropedicae SmR1] gb|ADJ65581.1| LamB/YcsF family protein [Herbaspirillum seropedicae SmR1] Length = 252 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 243/252 (96%), Positives = 247/252 (98%) Query: 1 MKTIDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGV 60 MKT+DLNSDMGEGFGPWTIGDGVDAAI+PLISSANIATGFHAGDPNTMRRTVE ARQHGV Sbjct: 1 MKTVDLNSDMGEGFGPWTIGDGVDAAILPLISSANIATGFHAGDPNTMRRTVELARQHGV 60 Query: 61 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMH 120 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNG+ LQHIKPHGALYMH Sbjct: 61 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGLPLQHIKPHGALYMH 120 Query: 121 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV 180 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV Sbjct: 121 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV 180 Query: 181 FTRRVGALDPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKS 240 FTRRVGALD AQVAAKVLRAC EGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATR S Sbjct: 181 FTRRVGALDAAQVAAKVLRACCEGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRNS 240 Query: 241 LDAADIAIAAPR 252 L+AADIAIAAPR Sbjct: 241 LEAADIAIAAPR 252 >ref|NP_249183.1| hypothetical protein PA0492 [Pseudomonas aeruginosa PAO1] ref|ZP_01363396.1| hypothetical protein PaerPA_01000490 [Pseudomonas aeruginosa PACS2] ref|YP_002438096.1| hypothetical protein PLES_04881 [Pseudomonas aeruginosa LESB58] ref|ZP_04930606.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] ref|ZP_04936908.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] sp|Q9I626|Y492_PSEAE RecName: Full=UPF0271 protein PA0492 gb|AAG03881.1|AE004486_10 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gb|EAZ54725.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gb|EAZ61027.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] emb|CAW25215.1| putative lactam utilization protein [Pseudomonas aeruginosa LESB58] gb|EGM16949.1| hypothetical protein PA13_18859 [Pseudomonas aeruginosa 138244] dbj|GAA19417.1| putative lactam utilization protein [Pseudomonas aeruginosa NCMG1179] Length = 252 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 203/252 (80%), Positives = 223/252 (88%) Query: 1 MKTIDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGV 60 M +DLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDP++MRRTVE A +HGV Sbjct: 1 MTEVDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPSSMRRTVEMAAEHGV 60 Query: 61 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMH 120 AIGAHPGFRDLVGFGRRH+ APAIELVNDMLYQLGALREFARL G++LQH+KPHGALYMH Sbjct: 61 AIGAHPGFRDLVGFGRRHIAAPAIELVNDMLYQLGALREFARLQGLSLQHVKPHGALYMH 120 Query: 121 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV 180 LARDE AAR+FV+TL++L+P LLL+CM GSA WR+ +EL Q +V EFYADRDYD SGSIV Sbjct: 121 LARDEVAARLFVETLQRLEPELLLYCMPGSATWRIGRELGQPLVREFYADRDYDRSGSIV 180 Query: 181 FTRRVGALDPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKS 240 FTRRV ALDP QVA KVLRACREG VRTVEG D+ IAFDSVCIHSDTPGAL LV +TR Sbjct: 181 FTRRVAALDPQQVADKVLRACREGKVRTVEGEDLDIAFDSVCIHSDTPGALELVASTRAR 240 Query: 241 LDAADIAIAAPR 252 L+ A I I APR Sbjct: 241 LEGAGIRIKAPR 252 >ref|YP_001345990.1| hypothetical protein PSPA7_0595 [Pseudomonas aeruginosa PA7] gb|ABR85183.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 252 Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats. Identities = 204/252 (80%), Positives = 222/252 (88%) Query: 1 MKTIDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGV 60 M +DLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDP++MRRTVE A +HGV Sbjct: 1 MTEVDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPSSMRRTVEMAAEHGV 60 Query: 61 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMH 120 AIGAHPGFRDLVGFGRRH+ APAIELVNDMLYQLGALREFARL G+ LQH+KPHGALYMH Sbjct: 61 AIGAHPGFRDLVGFGRRHIQAPAIELVNDMLYQLGALREFARLEGLALQHVKPHGALYMH 120 Query: 121 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV 180 LARDE AAR+FV+TL++L+P LLL+CM GSA WR+ +EL Q +V EFYADRDYD SGSIV Sbjct: 121 LARDEAAARLFVETLQRLEPELLLYCMPGSATWRIGRELGQPLVREFYADRDYDRSGSIV 180 Query: 181 FTRRVGALDPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKS 240 FTRRV ALDP QVA KVLRACREG VRTVEG D+ IAFDSVCIHSDTPGAL LV TR Sbjct: 181 FTRRVAALDPRQVADKVLRACREGKVRTVEGEDLDIAFDSVCIHSDTPGALELVAGTRAH 240 Query: 241 LDAADIAIAAPR 252 L+AA I I APR Sbjct: 241 LEAAGIRIKAPR 252 >ref|ZP_06876491.1| hypothetical protein PaerPAb_02612 [Pseudomonas aeruginosa PAb1] gb|EGM15145.1| hypothetical protein PA15_24749 [Pseudomonas aeruginosa 152504] gb|AEO72980.1| hypothetical protein PAM18_0491 [Pseudomonas aeruginosa M18] Length = 252 Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 203/252 (80%), Positives = 223/252 (88%) Query: 1 MKTIDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGV 60 M +DLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDP++MRRTVE A +HGV Sbjct: 1 MTEVDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPSSMRRTVEMAAEHGV 60 Query: 61 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMH 120 AIGAHPGFRDLVGFGRRH+ APAIELVNDMLYQLGALREFARL G++LQH+KPHGALYMH Sbjct: 61 AIGAHPGFRDLVGFGRRHIAAPAIELVNDMLYQLGALREFARLQGLSLQHVKPHGALYMH 120 Query: 121 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV 180 LARDE AAR+FV+TL++L+P LLL+CM GSA WR+ +EL Q +V EFYADRDYD SGSIV Sbjct: 121 LARDEAAARLFVETLQRLEPELLLYCMPGSATWRIGRELGQPLVREFYADRDYDRSGSIV 180 Query: 181 FTRRVGALDPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKS 240 FTRRV ALDP QVA KVLRACREG VRTVEG D+ IAFDSVCIHSDTPGAL LV +TR Sbjct: 181 FTRRVAALDPQQVADKVLRACREGKVRTVEGEDLDIAFDSVCIHSDTPGALELVASTRAR 240 Query: 241 LDAADIAIAAPR 252 L+ A I I APR Sbjct: 241 LEGAGIRIKAPR 252 >ref|ZP_07797669.1| putative lactam utilization protein [Pseudomonas aeruginosa 39016] gb|EFQ42765.1| putative lactam utilization protein [Pseudomonas aeruginosa 39016] dbj|BAK92515.1| hypothetical protein NCGM2_5704 [Pseudomonas aeruginosa NCGM2.S1] Length = 252 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 202/252 (80%), Positives = 222/252 (88%) Query: 1 MKTIDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPNTMRRTVEQARQHGV 60 M +DLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDP++MRRTVE A +HGV Sbjct: 1 MTEVDLNSDMGEGFGPWTIGDGVDAAIMPLISSANIATGFHAGDPSSMRRTVEMAAEHGV 60 Query: 61 AIGAHPGFRDLVGFGRRHLNAPAIELVNDMLYQLGALREFARLNGMTLQHIKPHGALYMH 120 AIG HPGFRDLVGFGRRH+ APAIELVNDMLYQLGALREFARL G++LQH+KPHGALYMH Sbjct: 61 AIGVHPGFRDLVGFGRRHIAAPAIELVNDMLYQLGALREFARLQGLSLQHVKPHGALYMH 120 Query: 121 LARDEEAARVFVQTLRQLDPNLLLFCMHGSAVWRVAQELQQAVVCEFYADRDYDNSGSIV 180 LARDE AAR+FV+TL++L+P LLL+CM GSA WR+ +EL Q +V EFYADRDYD SGSIV Sbjct: 121 LARDEAAARLFVETLQRLEPELLLYCMPGSATWRIGRELGQPLVREFYADRDYDRSGSIV 180 Query: 181 FTRRVGALDPAQVAAKVLRACREGVVRTVEGRDIPIAFDSVCIHSDTPGALALVQATRKS 240 FTRRV ALDP QVA KVLRACREG VRTVEG D+ IAFDSVCIHSDTPGAL LV +TR Sbjct: 181 FTRRVAALDPQQVADKVLRACREGKVRTVEGEDLDIAFDSVCIHSDTPGALELVASTRAR 240 Query: 241 LDAADIAIAAPR 252 L+ A I I APR Sbjct: 241 LEGAGIRIKAPR 252