BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2384.p (174 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775379.1| 6,7-dimethyl-8-ribityllumazine synthase [Her... 239 1e-61 ref|YP_004754714.1| 6,7-dimethyl-8-ribityllumazine synthase [Col... 211 2e-53 ref|YP_001353035.1| riboflavin synthase subunit beta [Janthinoba... 207 3e-52 ref|YP_001100354.1| riboflavin synthase subunit beta [Herminiimo... 202 1e-50 ref|YP_002874268.1| riboflavin synthase subunit beta [Pseudomona... 201 4e-50 >ref|YP_003775379.1| 6,7-dimethyl-8-ribityllumazine synthase [Herbaspirillum seropedicae SmR1] gb|ADJ63471.1| 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase beta chain) protein [Herbaspirillum seropedicae SmR1] Length = 169 Score = 239 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 139/169 (82%), Positives = 153/169 (90%), Gaps = 2/169 (1%) Query: 6 QSHLSAVPSHHGQRIAFVQASWHKDIVDQCRIAFTEEMAKVGWPTSSIDFFELPGAFEIP 65 QSHLSAV SHHGQRIAF+QA WHKDIVDQCRIAFTEEMAK+GWP +SIDFFELPGAFEIP Sbjct: 3 QSHLSAVSSHHGQRIAFIQACWHKDIVDQCRIAFTEEMAKLGWPAASIDFFELPGAFEIP 62 Query: 66 LHAKVLAKTGKYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLETEVPVFSAVLTPHH 125 LHAKVLAKTG+YAGIVASGLVVDGGIYRHDFVAQSVISALMQVQL+TEVPVFSAVLTPHH Sbjct: 63 LHAKVLAKTGRYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLDTEVPVFSAVLTPHH 122 Query: 126 FHSHSEHQQFFQEHFVVKGQDVARAWADTVVKVARIEAGQGNVAVLNAA 174 FHSHSEH +F +HF+VKG++ A+A A TV K+A++ AG A LNAA Sbjct: 123 FHSHSEHHDYFHQHFLVKGREAAQACATTVAKLAQVRAGAQ--ASLNAA 169 >ref|YP_004754714.1| 6,7-dimethyl-8-ribityllumazine synthase [Collimonas fungivorans Ter331] gb|AEK63891.1| 6,7-dimethyl-8-ribityllumazine synthase [Collimonas fungivorans Ter331] Length = 215 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 107/174 (61%), Positives = 134/174 (77%) Query: 1 MSQSHQSHLSAVPSHHGQRIAFVQASWHKDIVDQCRIAFTEEMAKVGWPTSSIDFFELPG 60 M Q H + + G+RIAF+QA WH+DIVDQCRIAF E+AK G+ IDFFE+ G Sbjct: 42 MQQQHNPAVDRSKTPCGERIAFIQAGWHRDIVDQCRIAFIAEIAKAGYSEQDIDFFEVAG 101 Query: 61 AFEIPLHAKVLAKTGKYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLETEVPVFSAV 120 AFEIPLHAK+LA + +YA +VA+GLVVDGGIYRH+FVAQ+VIS LMQVQLET VPV SAV Sbjct: 102 AFEIPLHAKLLANSSRYAAVVATGLVVDGGIYRHEFVAQAVISGLMQVQLETGVPVLSAV 161 Query: 121 LTPHHFHSHSEHQQFFQEHFVVKGQDVARAWADTVVKVARIEAGQGNVAVLNAA 174 LTPHHFH+ EH ++F EHF+VKG + ARA ADT+ K+ +++GQ V L++A Sbjct: 162 LTPHHFHAGEEHHKYFFEHFLVKGAEAARACADTIQKLRLLKSGQPAVRALHSA 215 >ref|YP_001353035.1| riboflavin synthase subunit beta [Janthinobacterium sp. Marseille] gb|ABR88799.1| riboflavin synthase beta chain [Janthinobacterium sp. Marseille] Length = 167 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 105/146 (71%), Positives = 127/146 (86%) Query: 18 QRIAFVQASWHKDIVDQCRIAFTEEMAKVGWPTSSIDFFELPGAFEIPLHAKVLAKTGKY 77 +RIAF+QASWHK+IVDQCRIAF EMA+ G+ SIDFFE+ GAFEIPLHAKVLAK+G+Y Sbjct: 14 RRIAFIQASWHKEIVDQCRIAFIAEMAERGYTEDSIDFFEVAGAFEIPLHAKVLAKSGRY 73 Query: 78 AGIVASGLVVDGGIYRHDFVAQSVISALMQVQLETEVPVFSAVLTPHHFHSHSEHQQFFQ 137 A +V +GLVVDGG+YRH+FV+Q+VIS LMQVQLETEVPV SAVLTPHHFHSH EHQ FF Sbjct: 74 AAVVGTGLVVDGGVYRHEFVSQAVISGLMQVQLETEVPVISAVLTPHHFHSHDEHQNFFF 133 Query: 138 EHFVVKGQDVARAWADTVVKVARIEA 163 +HF+VKG++ A A ADT+ ++ +IEA Sbjct: 134 QHFLVKGKEAAHACADTIARLQKIEA 159 >ref|YP_001100354.1| riboflavin synthase subunit beta [Herminiimonas arsenicoxydans] emb|CAL62231.1| 6,7-dimethyl-8-ribityllumazine synthase 2 (DMRL synthase 2) (Lumazine synthase 2) (Riboflavin synthase 2 beta chain) [Herminiimonas arsenicoxydans] Length = 167 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 105/147 (71%), Positives = 126/147 (85%) Query: 17 GQRIAFVQASWHKDIVDQCRIAFTEEMAKVGWPTSSIDFFELPGAFEIPLHAKVLAKTGK 76 +RIAF+QASWHK+IVDQCRIAF EEMA G+ IDFFE+ GAFEIPLHAKVLAK+G+ Sbjct: 13 ARRIAFIQASWHKEIVDQCRIAFVEEMAARGYSADVIDFFEVAGAFEIPLHAKVLAKSGR 72 Query: 77 YAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLETEVPVFSAVLTPHHFHSHSEHQQFF 136 YA IV +GLVVDGG+YRH+FV+Q+VIS LMQVQLETEVPV SAVLTPHHFHSH EHQ FF Sbjct: 73 YAAIVGTGLVVDGGVYRHEFVSQAVISGLMQVQLETEVPVISAVLTPHHFHSHDEHQGFF 132 Query: 137 QEHFVVKGQDVARAWADTVVKVARIEA 163 +HF+VKG++ A A ADT+ ++ +I+A Sbjct: 133 FQHFLVKGKEAAHACADTIQRLQQIDA 159 >ref|YP_002874268.1| riboflavin synthase subunit beta [Pseudomonas fluorescens SBW25] emb|CAY51572.1| 6,7-dimethyl-8-ribityllumazine synthase [Pseudomonas fluorescens SBW25] Length = 169 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 106/156 (67%), Positives = 122/156 (78%) Query: 10 SAVPSHHGQRIAFVQASWHKDIVDQCRIAFTEEMAKVGWPTSSIDFFELPGAFEIPLHAK 69 S +HHG+R+AF+QA WHKDIVDQ R F EM G+ S IDFFE+ GAFE+PLHAK Sbjct: 8 SKSKNHHGERVAFIQACWHKDIVDQSRKGFLAEMIAQGYQESDIDFFEVGGAFEMPLHAK 67 Query: 70 VLAKTGKYAGIVASGLVVDGGIYRHDFVAQSVISALMQVQLETEVPVFSAVLTPHHFHSH 129 +LAKTG+YAGIVA+ LVVDGGIYRH+FVAQSV+S LMQVQLETEVPVFS LTPHHFH+ Sbjct: 68 LLAKTGRYAGIVAAALVVDGGIYRHEFVAQSVVSGLMQVQLETEVPVFSVSLTPHHFHAG 127 Query: 130 SEHQQFFQEHFVVKGQDVARAWADTVVKVARIEAGQ 165 SEH FF EHFV KGQ+ AR ADT+ KV I + Sbjct: 128 SEHTTFFYEHFVHKGQEAARTCADTLHKVRAIRRSE 163