BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2382.p (291 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775377.1| heat shock HtpX protein [Herbaspirillum sero... 504 e-141 ref|YP_585605.1| heat shock protein HtpX [Cupriavidus metallidur... 434 e-120 ref|YP_728035.1| heat shock protein HtpX [Ralstonia eutropha H16... 427 e-117 ref|YP_002007045.1| heat shock protein htpx [Cupriavidus taiwane... 426 e-117 ref|YP_004687332.1| protease HtpX [Cupriavidus necator N-1] >gi|... 426 e-117 >ref|YP_003775377.1| heat shock HtpX protein [Herbaspirillum seropedicae SmR1] gb|ADJ63469.1| heat shock HtpX protein [Herbaspirillum seropedicae SmR1] Length = 292 Score = 504 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 266/292 (91%), Positives = 281/292 (96%), Gaps = 1/292 (0%) Query: 1 MKRIVLFLVTNLAVMLVLSFTASLLGVNRYLTANGLNFGMLLVFCGLMGFGGSFISLFMS 60 MKR++LFLVTNLAVMLVLS TASLLGVNRYLTANGLNFGMLLVFCGLMGFGGSFISLFMS Sbjct: 1 MKRVILFLVTNLAVMLVLSVTASLLGVNRYLTANGLNFGMLLVFCGLMGFGGSFISLFMS 60 Query: 61 KTIAKWSTGARVIEQPQNSTELWLLQTVQTLATRAQLPMPEVAVYDGPPNAFATGASKSN 120 KTIAKWSTGARVIEQPQNSTELWLLQTVQ LA RAQLPMPEVAVYDGPPNAFATGASKSN Sbjct: 61 KTIAKWSTGARVIEQPQNSTELWLLQTVQNLAARAQLPMPEVAVYDGPPNAFATGASKSN 120 Query: 121 SLVAVSTGLLQGMTKEEVEAVLAHEVAHIANGDMVTLTLIQGVVNTFVVFLSRVVGYFVD 180 SLVAVSTGLLQGMTK+EVEAVLAHEVAHIANGDMVTLTLIQGVVNTFV+F +R+VGYFVD Sbjct: 121 SLVAVSTGLLQGMTKDEVEAVLAHEVAHIANGDMVTLTLIQGVVNTFVMFFARIVGYFVD 180 Query: 181 AALRRGN-DNSGPGIGYMVTVFVCEIVFGILASIIVMYFSRQREYRADAGAAALMGSKVP 239 + LRR N +NSGPGIGYMVTVFVCEI+FGILASIIVMYFSRQREYRADAGAA+LMGS P Sbjct: 181 SFLRRNNEENSGPGIGYMVTVFVCEIIFGILASIIVMYFSRQREYRADAGAASLMGSNAP 240 Query: 240 MMNALRRLGGLQSDGLPQNLQASGISGRESWLGLFSSHPPLESRIAALQAAR 291 M+NALRRLGG+QSDGLPQNLQA+GISGRESW+GLFSSHP LESRIAALQ+ R Sbjct: 241 MINALRRLGGMQSDGLPQNLQAAGISGRESWMGLFSSHPSLESRIAALQSRR 292 >ref|YP_585605.1| heat shock protein HtpX [Cupriavidus metallidurans CH34] gb|ABF10336.1| membrane-associated Zn-dependent endopeptidase; self-cleaved [Cupriavidus metallidurans CH34] Length = 292 Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 233/292 (79%), Positives = 258/292 (88%), Gaps = 1/292 (0%) Query: 1 MKRIVLFLVTNLAVMLVLSFTASLLGVNRYLTANGLNFGMLLVFCGLMGFGGSFISLFMS 60 MKRI LFL TNLAVMLVLS TASLLGVNR+LT+NGLN GMLL F LMGFGGSFISL MS Sbjct: 1 MKRIFLFLATNLAVMLVLSVTASLLGVNRFLTSNGLNLGMLLAFAALMGFGGSFISLLMS 60 Query: 61 KTIAKWSTGARVIEQPQNSTELWLLQTVQTLATRAQLPMPEVAVYDGPPNAFATGASKSN 120 KTIAKWSTGA+VI P STELWL+QTV+ LATRA LPMPEVA+YDG PNAFATGASKS+ Sbjct: 61 KTIAKWSTGAQVITHPSTSTELWLVQTVEKLATRAGLPMPEVAIYDGEPNAFATGASKSS 120 Query: 121 SLVAVSTGLLQGMTKEEVEAVLAHEVAHIANGDMVTLTLIQGVVNTFVVFLSRVVGYFVD 180 SLVAVSTGLLQ M+ +EVEAVLAHEVAHIANGDMVTLTLIQGVVNTFV+F++RVVGYFVD Sbjct: 121 SLVAVSTGLLQSMSHDEVEAVLAHEVAHIANGDMVTLTLIQGVVNTFVIFMARVVGYFVD 180 Query: 181 AALRRGN-DNSGPGIGYMVTVFVCEIVFGILASIIVMYFSRQREYRADAGAAALMGSKVP 239 + LRR + ++SGPGIGYMVTV VCEIVFGILAS+IV FSR REYRADAGAA L+G+ P Sbjct: 181 SWLRRNDEESSGPGIGYMVTVVVCEIVFGILASVIVATFSRHREYRADAGAAKLLGTPSP 240 Query: 240 MMNALRRLGGLQSDGLPQNLQASGISGRESWLGLFSSHPPLESRIAALQAAR 291 M+ ALRRLGGL +DGLPQN+QA GISG +SWL LF+SHPP+ESRIAALQ R Sbjct: 241 MVAALRRLGGLDADGLPQNMQAMGISGGKSWLALFASHPPIESRIAALQGTR 292 >ref|YP_728035.1| heat shock protein HtpX [Ralstonia eutropha H16] emb|CAJ94667.1| Zn-dependent protease with chaperone function (HtpX) [Ralstonia eutropha H16] Length = 292 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 225/292 (77%), Positives = 260/292 (89%), Gaps = 1/292 (0%) Query: 1 MKRIVLFLVTNLAVMLVLSFTASLLGVNRYLTANGLNFGMLLVFCGLMGFGGSFISLFMS 60 MKR++LFL TNLAVMLVLS TAS+LGVNR+LTANGLN G LL F LMGFGG+FISL MS Sbjct: 1 MKRVLLFLATNLAVMLVLSITASVLGVNRFLTANGLNLGTLLAFAALMGFGGAFISLLMS 60 Query: 61 KTIAKWSTGARVIEQPQNSTELWLLQTVQTLATRAQLPMPEVAVYDGPPNAFATGASKSN 120 KTIAKWSTGA+VI P STELWL+QTV+ LA RA LPMPEVA+YDG PNAFATGA++++ Sbjct: 61 KTIAKWSTGAQVITHPSTSTELWLVQTVEKLAQRAGLPMPEVAIYDGEPNAFATGATRNS 120 Query: 121 SLVAVSTGLLQGMTKEEVEAVLAHEVAHIANGDMVTLTLIQGVVNTFVVFLSRVVGYFVD 180 SLVAVSTGLLQ M+ EEVEAVLAHEVAH+ANGDMVTLTLIQGVVNTFV+FL+RVVGYFVD Sbjct: 121 SLVAVSTGLLQSMSHEEVEAVLAHEVAHVANGDMVTLTLIQGVVNTFVIFLARVVGYFVD 180 Query: 181 AALRRGN-DNSGPGIGYMVTVFVCEIVFGILASIIVMYFSRQREYRADAGAAALMGSKVP 239 + LR+ + ++SGPGIGYMVTV VCEIVFGILASIIV +FSR+RE+RADAGAA +MG+ P Sbjct: 181 SMLRKNDEESSGPGIGYMVTVIVCEIVFGILASIIVAWFSRRREFRADAGAAGMMGTPTP 240 Query: 240 MMNALRRLGGLQSDGLPQNLQASGISGRESWLGLFSSHPPLESRIAALQAAR 291 M+ ALRRLGGL+ DGLPQN+QA GI+G +SW+ LFSSHPP+E RIAALQ+AR Sbjct: 241 MVAALRRLGGLEPDGLPQNMQAMGIAGGKSWMALFSSHPPIEQRIAALQSAR 292 >ref|YP_002007045.1| heat shock protein htpx [Cupriavidus taiwanensis LMG 19424] emb|CAQ70984.1| membrane-associated Zn-dependent endopeptidase [Cupriavidus taiwanensis LMG 19424] Length = 292 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 225/292 (77%), Positives = 260/292 (89%), Gaps = 1/292 (0%) Query: 1 MKRIVLFLVTNLAVMLVLSFTASLLGVNRYLTANGLNFGMLLVFCGLMGFGGSFISLFMS 60 MKR++LFL TNLAVMLVLS TAS+LGVNR+LTANGLN G LL F LMGFGG+FISL MS Sbjct: 1 MKRVLLFLATNLAVMLVLSITASVLGVNRFLTANGLNLGTLLAFAALMGFGGAFISLLMS 60 Query: 61 KTIAKWSTGARVIEQPQNSTELWLLQTVQTLATRAQLPMPEVAVYDGPPNAFATGASKSN 120 KTIAKWSTGA+VI P STELWL+QTV+ LA RA LPMPEVA+Y+G PNAFATGA+K++ Sbjct: 61 KTIAKWSTGAQVITHPSTSTELWLVQTVEKLAQRAGLPMPEVAIYEGEPNAFATGATKNS 120 Query: 121 SLVAVSTGLLQGMTKEEVEAVLAHEVAHIANGDMVTLTLIQGVVNTFVVFLSRVVGYFVD 180 SLVAVSTGLLQ M+ EEVEAVLAHEVAH+ANGDMVTLTLIQGVVNTFV+FL+RVVGYFVD Sbjct: 121 SLVAVSTGLLQSMSHEEVEAVLAHEVAHVANGDMVTLTLIQGVVNTFVIFLARVVGYFVD 180 Query: 181 AALRRGN-DNSGPGIGYMVTVFVCEIVFGILASIIVMYFSRQREYRADAGAAALMGSKVP 239 + LR+ + ++SGPGIGYMVTV VCEIVFGILASIIV +FSR+RE+RADAGAA++MG+ P Sbjct: 181 SMLRKNDEESSGPGIGYMVTVIVCEIVFGILASIIVAWFSRRREFRADAGAASMMGTPTP 240 Query: 240 MMNALRRLGGLQSDGLPQNLQASGISGRESWLGLFSSHPPLESRIAALQAAR 291 M+ ALRRLGGL DGLPQN+QA GI+G +SW+ LFSSHPP+E RIAALQ+AR Sbjct: 241 MVAALRRLGGLDPDGLPQNMQAMGIAGGKSWMALFSSHPPIEQRIAALQSAR 292 >ref|YP_004687332.1| protease HtpX [Cupriavidus necator N-1] gb|AEI78851.1| protease HtpX [Cupriavidus necator N-1] Length = 292 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 224/292 (76%), Positives = 260/292 (89%), Gaps = 1/292 (0%) Query: 1 MKRIVLFLVTNLAVMLVLSFTASLLGVNRYLTANGLNFGMLLVFCGLMGFGGSFISLFMS 60 MKR++LFL TNLAVMLVLS TAS+LGVNR+LTANGLN G LL F LMGFGG+FISL MS Sbjct: 1 MKRVLLFLATNLAVMLVLSITASVLGVNRFLTANGLNLGTLLAFAALMGFGGAFISLLMS 60 Query: 61 KTIAKWSTGARVIEQPQNSTELWLLQTVQTLATRAQLPMPEVAVYDGPPNAFATGASKSN 120 KTIAKWSTGA+VI P STELWL+QTV+ LA RA LPMPEVA+YDG PNAFATGA++++ Sbjct: 61 KTIAKWSTGAQVITHPSTSTELWLVQTVEKLAQRAGLPMPEVAIYDGEPNAFATGATRNS 120 Query: 121 SLVAVSTGLLQGMTKEEVEAVLAHEVAHIANGDMVTLTLIQGVVNTFVVFLSRVVGYFVD 180 SLVAVSTGLLQ M+ EEVEAVLAHEVAH+ANGDMVTLTLIQGVVNTFV+FL+RVVGYFVD Sbjct: 121 SLVAVSTGLLQSMSHEEVEAVLAHEVAHVANGDMVTLTLIQGVVNTFVIFLARVVGYFVD 180 Query: 181 AALRRGN-DNSGPGIGYMVTVFVCEIVFGILASIIVMYFSRQREYRADAGAAALMGSKVP 239 + LR+ + ++SGPGIGYMVTV +CEIVFGILASIIV +FSR+RE+RADAGAA +MG+ P Sbjct: 181 SMLRKNDEESSGPGIGYMVTVVICEIVFGILASIIVAWFSRRREFRADAGAAGMMGTPTP 240 Query: 240 MMNALRRLGGLQSDGLPQNLQASGISGRESWLGLFSSHPPLESRIAALQAAR 291 M+ ALRRLGGL+ DGLPQN+QA GI+G +SW+ LFSSHPP+E RIAALQ+AR Sbjct: 241 MVAALRRLGGLEPDGLPQNMQAMGIAGGKSWMALFSSHPPIEQRIAALQSAR 292