BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2378.p         (115 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08782557.1| CheC, inhibitor of MCP methylation [Methyloba...   130   1e-28
ref|YP_003847993.1| CheC, inhibitor of MCP methylation [Gallione...   113   1e-23
ref|YP_523145.1| CheC, inhibitor of MCP methylation [Rhodoferax ...   111   3e-23
gb|EGW60082.1| CheC, inhibitor of MCP methylation [Dechlorosoma ...    96   2e-18
emb|CAM77866.1| chemotaxis protein, CheC family [Magnetospirillu...    78   6e-13

>ref|ZP_08782557.1| CheC, inhibitor of MCP methylation [Methylobacter tundripaludum
           SV96]
 gb|EGW20829.1| CheC, inhibitor of MCP methylation [Methylobacter tundripaludum
           SV96]
          Length = 204

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 75/112 (66%), Positives = 88/112 (78%), Gaps = 1/112 (0%)

Query: 1   MMGSQMSLDELAEFEREAMCELGNIILNACLSAMADMLEITLNSSLPQYLVSSPDDISAR 60
           MMGSQMSL+ELAEFE EAMCELGNIILNACLSAMAD+L  TL SSLP Y V+S D+I  R
Sbjct: 93  MMGSQMSLEELAEFEHEAMCELGNIILNACLSAMADILHFTLESSLPNYRVASADEILHR 152

Query: 61  LASAQGDESYVLVLHIDLVIEKHQTDGHLIFLLSSSSLHALVEHVQRYLGKI 112
           L     ++ YV+VLHIDL IEK  T G+L+FLLSS+SL  LV H+ ++LG I
Sbjct: 153 LKE-NSNQPYVMVLHIDLAIEKRHTTGNLVFLLSSTSLTNLVIHINQFLGSI 203


>ref|YP_003847993.1| CheC, inhibitor of MCP methylation [Gallionella capsiferriformans
           ES-2]
 gb|ADL56229.1| CheC, inhibitor of MCP methylation [Gallionella capsiferriformans
           ES-2]
          Length = 203

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 63/112 (56%), Positives = 83/112 (74%), Gaps = 1/112 (0%)

Query: 1   MMGSQMSLDELAEFEREAMCELGNIILNACLSAMADMLEITLNSSLPQYLVSSPDDISAR 60
           MMGS +SL ELAEFE++AMCELGNIILNACLSAMAD+L +TL S+LPQY V SP+ +   
Sbjct: 93  MMGSHVSLAELAEFEQDAMCELGNIILNACLSAMADLLGLTLQSTLPQYTVDSPETLLQN 152

Query: 61  LASAQGDESYVLVLHIDLVIEKHQTDGHLIFLLSSSSLHALVEHVQRYLGKI 112
           + + + D+  ++ LHIDL IE  QT G L+FLLS+SSL   + H+  ++  I
Sbjct: 153 I-TGEIDQPVMMALHIDLTIEMRQTQGCLVFLLSTSSLKEFLSHIDAFITGI 203


>ref|YP_523145.1| CheC, inhibitor of MCP methylation [Rhodoferax ferrireducens T118]
 gb|ABD69614.1| CheC, inhibitor of MCP methylation [Rhodoferax ferrireducens T118]
          Length = 202

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 60/112 (53%), Positives = 85/112 (75%), Gaps = 1/112 (0%)

Query: 1   MMGSQMSLDELAEFEREAMCELGNIILNACLSAMADMLEITLNSSLPQYLVSSPDDISAR 60
           M+GSQ+  ++L E+E+EAMCE+GNIILNACLSAMADML I+  S+LP+Y  + PD +  R
Sbjct: 92  MLGSQVQKEDLVEYEQEAMCEVGNIILNACLSAMADMLGISFESTLPEYSSAEPDVVIER 151

Query: 61  LASAQGDESYVLVLHIDLVIEKHQTDGHLIFLLSSSSLHALVEHVQRYLGKI 112
           L  A  D   +LVLHI+++IEK ++ G LIF LSSSSL  L+ H+++++ +I
Sbjct: 152 LV-ADADNPLMLVLHINMLIEKRRSQGTLIFWLSSSSLQELMLHLEQFVSRI 202


>gb|EGW60082.1| CheC, inhibitor of MCP methylation [Dechlorosoma suillum PS]
          Length = 205

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/111 (45%), Positives = 74/111 (66%), Gaps = 2/111 (1%)

Query: 1   MMGSQMSLDELAEFEREAMCELGNIILNACLSAMADMLEITLNSSLPQYLVSSPDDISAR 60
           M+G  +SL EL E E+EAM E+GNI+LNAC+  +A++    LNS+LP Y + SPD++   
Sbjct: 92  MVGDSLSLKELTELEQEAMSEIGNILLNACVGTLANLFRRPLNSTLPTYHLGSPDEVLG- 150

Query: 61  LASAQGDESYVLVLHIDLVIEKHQTDGHLIFLLSSSSLHALVEHVQRYLGK 111
               QG++  VL+LHIDL +E+H+  G++ FLLS  S+  LV  V  Y+ +
Sbjct: 151 -GQIQGNDEAVLLLHIDLTLEQHEIQGYVAFLLSVDSIANLVAEVDSYIAQ 200


>emb|CAM77866.1| chemotaxis protein, CheC family [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 211

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 1   MMGSQMSLDELAEFEREAMCELGNIILNACLSAMADMLEITLNSSLPQYLVSSPDDI--S 58
           M+G  + LD+L E E+EA+ E+GNIILNACL ++A+ L + + SSLP Y+      I  +
Sbjct: 95  MLGDDLPLDQLTELEQEALMEVGNIILNACLGSLANQLGMGVESSLPCYIRGRGGRILDT 154

Query: 59  ARLASAQGDESYVLVLHIDLVIEKHQTDGHLIFLLSSSSLHALVEHVQRY-LGKIG 113
              +   GD   V+ LH+D  ++     G+L F++  +S H  V+ V  Y + +IG
Sbjct: 155 GDRSGTGGDSEMVMFLHVDFAVKSKDVHGYLAFVMDITSAHHFVDAVHAYVMAQIG 210