BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2368.p         (193 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_04947744.1| Transposase [Burkholderia dolosa AUO158] >gi|...   315   2e-84
emb|CBJ38132.1| putative transposase [Ralstonia solanacearum CMR15]   300   1e-79
ref|ZP_06843131.1| transposase IS4 family protein [Burkholderia ...   299   1e-79
ref|YP_559987.1| transposase [Burkholderia xenovorans LB400] >gi...   299   2e-79
emb|CBJ37056.1| putative transposase [Ralstonia solanacearum CMR15]   299   2e-79

>ref|ZP_04947744.1| Transposase [Burkholderia dolosa AUO158]
 gb|EAY70915.1| Transposase [Burkholderia dolosa AUO158]
          Length = 489

 Score =  315 bits (807), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 154/167 (92%), Positives = 160/167 (95%)

Query: 1   MLKKPTAAQHELEMVTIEMLVPKDHLLRKIDAAVDFEFLREKVAHLYCADNGRPALDPVV 60
           MLKKPT AQ ELEMVT+EMLVPKDHLLRKI+AAVDFEF+REKVAHLYCADNGRPALDPVV
Sbjct: 1   MLKKPTPAQEELEMVTLEMLVPKDHLLRKIEAAVDFEFIREKVAHLYCADNGRPALDPVV 60

Query: 61  LFKLLFIGYLFGIRSERQLIREVQVNVAYRWFAGFRLTDKVPDSSTFSQNRRRRFIDTTV 120
           LFKLL IGYLFG+RSERQL+REVQVNVAYRWFAGFRLTDKVPD+STFSQNRRRRF DTTV
Sbjct: 61  LFKLLLIGYLFGVRSERQLMREVQVNVAYRWFAGFRLTDKVPDASTFSQNRRRRFTDTTV 120

Query: 121 YQEIFDEIVRQAIGRGMVDGRVLYSDSTHLKANANKNKFDYVQVTPT 167
           YQEIFDEIVRQAIGRGMVDGRVLYSDSTHLKANANKNKFD VQV  T
Sbjct: 121 YQEIFDEIVRQAIGRGMVDGRVLYSDSTHLKANANKNKFDEVQVAQT 167


>emb|CBJ38132.1| putative transposase [Ralstonia solanacearum CMR15]
          Length = 525

 Score =  300 bits (767), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 144/167 (86%), Positives = 155/167 (92%)

Query: 1   MLKKPTAAQHELEMVTIEMLVPKDHLLRKIDAAVDFEFLREKVAHLYCADNGRPALDPVV 60
           MLK PT AQHELEMVT+E LVPKDHLLRKIDAAVDFEF+R KVAHLYCADNGRPALDPVV
Sbjct: 32  MLKSPTPAQHELEMVTLEELVPKDHLLRKIDAAVDFEFIRAKVAHLYCADNGRPALDPVV 91

Query: 61  LFKLLFIGYLFGIRSERQLIREVQVNVAYRWFAGFRLTDKVPDSSTFSQNRRRRFIDTTV 120
           +FKLLFIGYLFG+RSERQL+REVQVNVAYRWFA FRLTDKVPD+STFSQNRRRR+ DT V
Sbjct: 92  MFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRYTDTAV 151

Query: 121 YQEIFDEIVRQAIGRGMVDGRVLYSDSTHLKANANKNKFDYVQVTPT 167
           YQEIFDEIVRQA+G GMV+GRVLY+DSTHLKANANKNK+D V V  T
Sbjct: 152 YQEIFDEIVRQAMGHGMVEGRVLYTDSTHLKANANKNKYDMVTVEQT 198


>ref|ZP_06843131.1| transposase IS4 family protein [Burkholderia sp. Ch1-1]
 gb|EFG69324.1| transposase IS4 family protein [Burkholderia sp. Ch1-1]
          Length = 507

 Score =  299 bits (765), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 144/167 (86%), Positives = 156/167 (93%)

Query: 1   MLKKPTAAQHELEMVTIEMLVPKDHLLRKIDAAVDFEFLREKVAHLYCADNGRPALDPVV 60
           MLKKPT  QHELEMVT+E LVPKDHLLRKIDAAVDFEF+REKVAHLYCADNGRPALDPVV
Sbjct: 4   MLKKPTPMQHELEMVTLEELVPKDHLLRKIDAAVDFEFIREKVAHLYCADNGRPALDPVV 63

Query: 61  LFKLLFIGYLFGIRSERQLIREVQVNVAYRWFAGFRLTDKVPDSSTFSQNRRRRFIDTTV 120
           +FKLLF+GYLFG+RSERQL+REVQVNVAYRWFA  RLTD+VPD+STFSQNRRRRF DTTV
Sbjct: 64  MFKLLFVGYLFGVRSERQLMREVQVNVAYRWFARLRLTDRVPDASTFSQNRRRRFTDTTV 123

Query: 121 YQEIFDEIVRQAIGRGMVDGRVLYSDSTHLKANANKNKFDYVQVTPT 167
           YQEIFD IV+QAIGRGMV+GRVLY+DSTHLKANANK KFD VQ+  T
Sbjct: 124 YQEIFDAIVQQAIGRGMVEGRVLYTDSTHLKANANKRKFDLVQLEQT 170


>ref|YP_559987.1| transposase [Burkholderia xenovorans LB400]
 gb|ABE31935.1| Transposase [Burkholderia xenovorans LB400]
          Length = 504

 Score =  299 bits (765), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 144/167 (86%), Positives = 156/167 (93%)

Query: 1   MLKKPTAAQHELEMVTIEMLVPKDHLLRKIDAAVDFEFLREKVAHLYCADNGRPALDPVV 60
           MLKKPT  QHELEMVT+E LVPKDHLLRKIDAAVDFEF+REKVAHLYCADNGRPALDPVV
Sbjct: 1   MLKKPTPMQHELEMVTLEELVPKDHLLRKIDAAVDFEFIREKVAHLYCADNGRPALDPVV 60

Query: 61  LFKLLFIGYLFGIRSERQLIREVQVNVAYRWFAGFRLTDKVPDSSTFSQNRRRRFIDTTV 120
           +FKLLF+GYLFG+RSERQL+REVQVNVAYRWFA  RLTD+VPD+STFSQNRRRRF DTTV
Sbjct: 61  MFKLLFVGYLFGVRSERQLMREVQVNVAYRWFARLRLTDRVPDASTFSQNRRRRFTDTTV 120

Query: 121 YQEIFDEIVRQAIGRGMVDGRVLYSDSTHLKANANKNKFDYVQVTPT 167
           YQEIFD IV+QAIGRGMV+GRVLY+DSTHLKANANK KFD VQ+  T
Sbjct: 121 YQEIFDAIVQQAIGRGMVEGRVLYTDSTHLKANANKRKFDLVQLEQT 167


>emb|CBJ37056.1| putative transposase [Ralstonia solanacearum CMR15]
          Length = 507

 Score =  299 bits (765), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 144/167 (86%), Positives = 155/167 (92%)

Query: 1   MLKKPTAAQHELEMVTIEMLVPKDHLLRKIDAAVDFEFLREKVAHLYCADNGRPALDPVV 60
           MLK PT AQHELEMVT+E LVPKDHLLRKIDAAVDFEF+R KVAHLYCADNGRPALDPVV
Sbjct: 14  MLKSPTPAQHELEMVTLEELVPKDHLLRKIDAAVDFEFIRAKVAHLYCADNGRPALDPVV 73

Query: 61  LFKLLFIGYLFGIRSERQLIREVQVNVAYRWFAGFRLTDKVPDSSTFSQNRRRRFIDTTV 120
           +FKLLFIGYLFG+RSERQL+REVQVNVAYRWFA FRLTDKVPD+STFSQNRRRR+ DT V
Sbjct: 74  MFKLLFIGYLFGVRSERQLMREVQVNVAYRWFARFRLTDKVPDASTFSQNRRRRYTDTAV 133

Query: 121 YQEIFDEIVRQAIGRGMVDGRVLYSDSTHLKANANKNKFDYVQVTPT 167
           YQEIFDEIVRQA+G GMV+GRVLY+DSTHLKANANKNK+D V V  T
Sbjct: 134 YQEIFDEIVRQAMGHGMVEGRVLYTDSTHLKANANKNKYDMVTVEQT 180