BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2367.p (350 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04947744.1| Transposase [Burkholderia dolosa AUO158] >gi|... 489 e-136 emb|CCA86144.1| putative transposase [Ralstonia syzygii R24] 462 e-128 emb|CCA87604.1| putative transposase [Ralstonia syzygii R24] 462 e-128 emb|CCA87760.1| putative transposase [Ralstonia syzygii R24] 460 e-127 emb|CBJ39091.1| putative transposase [Ralstonia solanacearum CMR15] 452 e-125 >ref|ZP_04947744.1| Transposase [Burkholderia dolosa AUO158] gb|EAY70915.1| Transposase [Burkholderia dolosa AUO158] Length = 489 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 238/282 (84%), Positives = 263/282 (93%), Gaps = 1/282 (0%) Query: 25 KLLQQPSAYLAELDAAVDIDRAEHGKKPLKRDDDDEPP-TKEIKVSRTDPESGYMVRDDK 83 ++ Q PSAYLAEL+AA+D DRA GKKPLKRDDDD+PP +K+IKVSRTD ESGYMVRDDK Sbjct: 163 QVAQTPSAYLAELNAAIDADRAAQGKKPLKRDDDDQPPPSKQIKVSRTDAESGYMVRDDK 222 Query: 84 PKGFFYLDHRTVDAKHSIITDTHVTPASVHDSQPYLARLDRQRQTFGFDVQAVGLDAGYF 143 PKGFFYLDHRTVDAKH+IITDTHVTPASVHDSQPYLARLDRQR+ FGF+VQAVGLDAGYF Sbjct: 223 PKGFFYLDHRTVDAKHAIITDTHVTPASVHDSQPYLARLDRQRKRFGFEVQAVGLDAGYF 282 Query: 144 TPAVCQGLENREISGVMGYRTPNHKPGTFFKRAYEYDAYRDEYICPQGQPLRYSTTNRLG 203 TPA+CQGLE+R ++GVMGYR+PNHKPGTF+KR Y YDAYRDEY+CPQGQ LRYSTTNR+G Sbjct: 283 TPAICQGLEDRGVTGVMGYRSPNHKPGTFYKREYRYDAYRDEYMCPQGQTLRYSTTNRVG 342 Query: 204 YREYKSNPEQCRGCKVREQCTNSANAVKVVTRHVWERSKEKVDDRRRTEWGKRIYARRKE 263 YREYKSNPE C+ C+ R QCT+SANA+KVV RHVWER+KE+VD RR TEWGKRIYARRKE Sbjct: 343 YREYKSNPELCKRCEARSQCTSSANAIKVVVRHVWERAKERVDARRLTEWGKRIYARRKE 402 Query: 264 TVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNMKKI 305 TVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQN+KKI Sbjct: 403 TVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKI 444 >emb|CCA86144.1| putative transposase [Ralstonia syzygii R24] Length = 475 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 234/278 (84%), Positives = 251/278 (90%) Query: 28 QQPSAYLAELDAAVDIDRAEHGKKPLKRDDDDEPPTKEIKVSRTDPESGYMVRDDKPKGF 87 Q PSAYLAELDAAVD DRA HGKKPLKRDDD PP+KE K+SRTDP+SG+MVRDDKP+GF Sbjct: 153 QTPSAYLAELDAAVDADRAAHGKKPLKRDDDAPPPSKETKLSRTDPDSGFMVRDDKPRGF 212 Query: 88 FYLDHRTVDAKHSIITDTHVTPASVHDSQPYLARLDRQRQTFGFDVQAVGLDAGYFTPAV 147 FYLDHRTVDAKH+IITDTHVTPASVHDSQPYLARLD QR+ FGF VQAVGLDAGYFTPA+ Sbjct: 213 FYLDHRTVDAKHAIITDTHVTPASVHDSQPYLARLDHQRERFGFQVQAVGLDAGYFTPAI 272 Query: 148 CQGLENREISGVMGYRTPNHKPGTFFKRAYEYDAYRDEYICPQGQPLRYSTTNRLGYREY 207 CQGLE R I+GVMGYRTPNHKPGTF+KR YEYD YRDE +CP GQ L YSTTNR GYREY Sbjct: 273 CQGLEERNIAGVMGYRTPNHKPGTFYKRQYEYDRYRDESVCPAGQALPYSTTNRSGYREY 332 Query: 208 KSNPEQCRGCKVREQCTNSANAVKVVTRHVWERSKEKVDDRRRTEWGKRIYARRKETVER 267 KS+P CR C VR QCTNSANAVKVV RHVWE +KE+VD RR TEWGKR+YARRKETVER Sbjct: 333 KSDPTICRRCTVRTQCTNSANAVKVVVRHVWEWAKERVDARRLTEWGKRLYARRKETVER 392 Query: 268 SFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNMKKI 305 SFADAKQLHGHRYARMRGLR+VAEQCLLAAAAQN+KKI Sbjct: 393 SFADAKQLHGHRYARMRGLRRVAEQCLLAAAAQNIKKI 430 >emb|CCA87604.1| putative transposase [Ralstonia syzygii R24] Length = 475 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 234/278 (84%), Positives = 251/278 (90%) Query: 28 QQPSAYLAELDAAVDIDRAEHGKKPLKRDDDDEPPTKEIKVSRTDPESGYMVRDDKPKGF 87 Q PSAYLAELDAAVD DRA HGKKPLKRDDD PP+KE K+SRTDP+SG+MVRDDKP+GF Sbjct: 153 QTPSAYLAELDAAVDADRAAHGKKPLKRDDDAPPPSKETKLSRTDPDSGFMVRDDKPRGF 212 Query: 88 FYLDHRTVDAKHSIITDTHVTPASVHDSQPYLARLDRQRQTFGFDVQAVGLDAGYFTPAV 147 FYLDHRTVDAKH+IITDTHVTPASVHDSQPYLARLD QR+ FGF VQAVGLDAGYFTPA+ Sbjct: 213 FYLDHRTVDAKHAIITDTHVTPASVHDSQPYLARLDHQRERFGFKVQAVGLDAGYFTPAI 272 Query: 148 CQGLENREISGVMGYRTPNHKPGTFFKRAYEYDAYRDEYICPQGQPLRYSTTNRLGYREY 207 CQGLE R I+GVMGYRTPNHKPGTF+KR YEYD YRDE +CP GQ L YSTTNR GYREY Sbjct: 273 CQGLEERNIAGVMGYRTPNHKPGTFYKRQYEYDRYRDESVCPAGQALPYSTTNRSGYREY 332 Query: 208 KSNPEQCRGCKVREQCTNSANAVKVVTRHVWERSKEKVDDRRRTEWGKRIYARRKETVER 267 KS+P CR C VR QCTNSANAVKVV RHVWE +KE+VD RR TEWGKR+YARRKETVER Sbjct: 333 KSDPTICRRCTVRTQCTNSANAVKVVVRHVWEWAKERVDARRLTEWGKRLYARRKETVER 392 Query: 268 SFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNMKKI 305 SFADAKQLHGHRYARMRGLR+VAEQCLLAAAAQN+KKI Sbjct: 393 SFADAKQLHGHRYARMRGLRRVAEQCLLAAAAQNIKKI 430 >emb|CCA87760.1| putative transposase [Ralstonia syzygii R24] Length = 450 Score = 460 bits (1184), Expect = e-127, Method: Composition-based stats. Identities = 234/278 (84%), Positives = 251/278 (90%) Query: 28 QQPSAYLAELDAAVDIDRAEHGKKPLKRDDDDEPPTKEIKVSRTDPESGYMVRDDKPKGF 87 Q PSAYLAELDAAVD DRA HGKKPLKRDDD PP+KE K+SRTDP+SG+MVRDDKP+GF Sbjct: 153 QTPSAYLAELDAAVDADRAAHGKKPLKRDDDAPPPSKETKLSRTDPDSGFMVRDDKPRGF 212 Query: 88 FYLDHRTVDAKHSIITDTHVTPASVHDSQPYLARLDRQRQTFGFDVQAVGLDAGYFTPAV 147 FYLDHRTVDAKH+IITDTHVTPASVHDSQPYLARLD QR+ FGF VQAVGLDAGYFTPA+ Sbjct: 213 FYLDHRTVDAKHAIITDTHVTPASVHDSQPYLARLDHQRERFGFKVQAVGLDAGYFTPAI 272 Query: 148 CQGLENREISGVMGYRTPNHKPGTFFKRAYEYDAYRDEYICPQGQPLRYSTTNRLGYREY 207 CQGLE R I+GVMGYRTPNHKPGTF+KR YEYD YRDE +CP GQ L YSTTNR GYREY Sbjct: 273 CQGLEERNIAGVMGYRTPNHKPGTFYKRQYEYDRYRDESVCPAGQALPYSTTNRSGYREY 332 Query: 208 KSNPEQCRGCKVREQCTNSANAVKVVTRHVWERSKEKVDDRRRTEWGKRIYARRKETVER 267 KS+P CR C VR QCTNSANAVKVV RHVWE +KE+VD RR TEWGKR+YARRKETVER Sbjct: 333 KSDPTICRRCTVRTQCTNSANAVKVVVRHVWEWAKERVDARRLTEWGKRLYARRKETVER 392 Query: 268 SFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNMKKI 305 SFADAKQLHGHRYARMRGLR+VAEQCLLAAAAQN+KKI Sbjct: 393 SFADAKQLHGHRYARMRGLRRVAEQCLLAAAAQNIKKI 430 >emb|CBJ39091.1| putative transposase [Ralstonia solanacearum CMR15] Length = 524 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 235/284 (82%), Positives = 254/284 (89%), Gaps = 6/284 (2%) Query: 28 QQPSAYLAELDAAVDIDRAEHGKKPLKRDDDD------EPPTKEIKVSRTDPESGYMVRD 81 Q PSAYLAELDAAVD DRA HGKKPLKRDD D +P KEIK+SRTDP+SG+MVRD Sbjct: 196 QTPSAYLAELDAAVDADRAAHGKKPLKRDDGDDGAAGGKPCEKEIKLSRTDPDSGFMVRD 255 Query: 82 DKPKGFFYLDHRTVDAKHSIITDTHVTPASVHDSQPYLARLDRQRQTFGFDVQAVGLDAG 141 DKP+GFFYLDHRTVDAKH+IITDTHVTPASVHDSQPYL RLDRQR+ FGF VQAVGLDAG Sbjct: 256 DKPRGFFYLDHRTVDAKHAIITDTHVTPASVHDSQPYLERLDRQRECFGFKVQAVGLDAG 315 Query: 142 YFTPAVCQGLENREISGVMGYRTPNHKPGTFFKRAYEYDAYRDEYICPQGQPLRYSTTNR 201 YF PAVC+GLE+R+I+GVMGYRTPNHKPGTF+KR YEYD YRDEY+CP GQ L YSTTNR Sbjct: 316 YFVPAVCKGLEDRQIAGVMGYRTPNHKPGTFYKRQYEYDRYRDEYVCPAGQALPYSTTNR 375 Query: 202 LGYREYKSNPEQCRGCKVREQCTNSANAVKVVTRHVWERSKEKVDDRRRTEWGKRIYARR 261 GYREYKS+P CR C VR QCTNSANAVKVVTRHVWE +KE+VD RR TEWGKR+YARR Sbjct: 376 NGYREYKSDPTICRRCAVRTQCTNSANAVKVVTRHVWEWAKERVDARRLTEWGKRLYARR 435 Query: 262 KETVERSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNMKKI 305 KETVERSFADAKQLHGHRYARMRGLR+VAEQCLLAAAAQN+KKI Sbjct: 436 KETVERSFADAKQLHGHRYARMRGLRRVAEQCLLAAAAQNIKKI 479