BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2363.p (371 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775357.1| beta-N-acetylhexosaminidase [Herbaspirillum ... 638 0.0 ref|YP_004753514.1| N-acetylhexosaminidase [Collimonas fungivora... 483 e-134 ref|YP_001353065.1| beta-N-acetylhexosaminidase [Janthinobacteri... 480 e-133 ref|YP_001100323.1| beta N-acetyl-glucosaminidase [Herminiimonas... 473 e-131 ref|YP_559908.1| beta-hexosaminidase [Burkholderia xenovorans LB... 461 e-127 >ref|YP_003775357.1| beta-N-acetylhexosaminidase [Herbaspirillum seropedicae SmR1] gb|ADJ63449.1| beta-N-acetylhexosaminidase protein [Herbaspirillum seropedicae SmR1] Length = 342 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 333/342 (97%), Positives = 339/342 (99%) Query: 30 MNQAVKPLGPVMLDVVGTTLDAADIARLQHPLTGGVILFARNYENRAQLVALTAAIRQAR 89 MNQAVKPLGPVMLDVVGT L+AADIARLQHPLTGGVILFARNYE+RAQLVALT+AIRQAR Sbjct: 1 MNQAVKPLGPVMLDVVGTRLEAADIARLQHPLTGGVILFARNYESRAQLVALTSAIRQAR 60 Query: 90 PGILIAVDHEGGRVQRFRTDGFTRLPAMGQLGQLWDRDVLQATKVATATGFVLAAELRAC 149 PGILIAVDHEGGRVQRFRTDGFTRLPAMGQLGQLWDRDVLQATKVATATGFVLAAELRAC Sbjct: 61 PGILIAVDHEGGRVQRFRTDGFTRLPAMGQLGQLWDRDVLQATKVATATGFVLAAELRAC 120 Query: 150 GIDLSFTPVLDLDYGVSSVIGDRSFHRDPRVVTLMAKSLNHGLALAGMANCGKHFPGHGF 209 GIDLSFTPVLDLDYG S+VIGDRSFHRDPRVVTLMAKSLNHGLALAGMANCGKHFPGHGF Sbjct: 121 GIDLSFTPVLDLDYGASTVIGDRSFHRDPRVVTLMAKSLNHGLALAGMANCGKHFPGHGF 180 Query: 210 VTADSHVAIPVDERGLDEILGDDATPYDWLGMSLAAVMPAHVIYPKVDAQPAGFSKVWLS 269 VTADSHVAIPVDER LDEILGDDATPYDWLGMSLAAVMPAHVIYPKVDAQPAGFSKVWLS Sbjct: 181 VTADSHVAIPVDERELDEILGDDATPYDWLGMSLAAVMPAHVIYPKVDAQPAGFSKVWLS 240 Query: 270 MLRERFGFQGVIFSDDLSMHGASVAGGPLQAAQAALDAGCDVALICNSPDKADAILAGLQ 329 MLRERFGFQGVIFSDDLSMHGASVAGGPL+AAQAALDAGCDVALICNSPDKADAILAGLQ Sbjct: 241 MLRERFGFQGVIFSDDLSMHGASVAGGPLEAAQAALDAGCDVALICNSPDKADAILAGLQ 300 Query: 330 GGTDAASAARRATLLPCGEALAWDALQADPRYLAARALLQSL 371 GGTDAASAARRATLLPCGEALAWDALQADPRYLAARAL+QSL Sbjct: 301 GGTDAASAARRATLLPCGEALAWDALQADPRYLAARALVQSL 342 >ref|YP_004753514.1| N-acetylhexosaminidase [Collimonas fungivorans Ter331] gb|ACF05804.1| N-acetylhexosaminidase [Collimonas fungivorans Ter331] gb|AEK62691.1| N-acetylhexosaminidase [Collimonas fungivorans Ter331] Length = 349 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 251/345 (72%), Positives = 283/345 (82%), Gaps = 1/345 (0%) Query: 28 EVMNQAVKPLGPVMLDVVGTTLDAADIARLQHPLTGGVILFARNYENRAQLVALTAAIRQ 87 E + + LGPVMLDVVG +L A DI R++HPLTGGVILF RNY++RAQL ALTAAI Sbjct: 4 ETHTKKLAALGPVMLDVVGASLSADDIRRIRHPLTGGVILFTRNYQDRAQLTALTAAIHA 63 Query: 88 ARPGILIAVDHEGGRVQRFRTDGFTRLPAMGQLGQLWDRDVLQATKVATATGFVLAAELR 147 ARPGILIAVDHEGGRVQRFRTDGFTRLPAM LGQ WDRDVL A + ATA GFVLA+ELR Sbjct: 64 ARPGILIAVDHEGGRVQRFRTDGFTRLPAMRLLGQQWDRDVLGAVETATALGFVLASELR 123 Query: 148 ACGIDLSFTPVLDLDYGVSSVIGDRSFHRDPRVVTLMAKSLNHGLALAGMANCGKHFPGH 207 ACG+DLSFTPVLDLDYG SSVIG+R+FHRDPRVV L+AKSLNHGLALAGMANCGKHFPGH Sbjct: 124 ACGVDLSFTPVLDLDYGDSSVIGERAFHRDPRVVALLAKSLNHGLALAGMANCGKHFPGH 183 Query: 208 GFVTADSHVAIPVDERGLDEILGDDATPYDWLGMSLAAVMPAHVIYPKVDAQPAGFSKVW 267 G+V DSH ++P+D+R L +I+ +D PYDWLGMSLAAVMPAHVIY KVD AGFSK W Sbjct: 184 GYVHGDSHSSLPIDDRSLAQIMEEDVKPYDWLGMSLAAVMPAHVIYSKVDKHSAGFSKKW 243 Query: 268 LSMLRERFGFQGVIFSDDLSMHGASVAGGPLQAAQAALDAGCDVALICNSPDKADAILAG 327 L++LRE GF GVIFSDDLSM A AGG L A+AAL AGCDV LICNSPDKAD +LAG Sbjct: 244 LTILREEIGFNGVIFSDDLSMEAAGSAGGVLDGAKAALAAGCDVVLICNSPDKADQLLAG 303 Query: 328 LQG-GTDAASAARRATLLPCGEALAWDALQADPRYLAARALLQSL 371 L + AA +AR ATL+P AL W+ LQAD RYLAAR+L+Q+L Sbjct: 304 LDAVDSSAAFSARLATLVPQTAALDWETLQADARYLAARSLVQAL 348 >ref|YP_001353065.1| beta-N-acetylhexosaminidase [Janthinobacterium sp. Marseille] gb|ABR88316.1| beta-N-acetylhexosaminidase [Janthinobacterium sp. Marseille] Length = 350 Score = 480 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 250/336 (74%), Positives = 273/336 (81%), Gaps = 6/336 (1%) Query: 33 AVKP---LGPVMLDVVGTTLDAADIARLQHPLTGGVILFARNYENRAQLVALTAAIRQAR 89 AV P GPVMLDVVGTTL A DI R+QHPLTGGVILFARNY +RAQL ALTAAI AR Sbjct: 3 AVNPAGKFGPVMLDVVGTTLSADDIRRIQHPLTGGVILFARNYTDRAQLTALTAAIHAAR 62 Query: 90 PGILIAVDHEGGRVQRFRTDGFTRLPAMGQLGQLWDRDVLQATKVATATGFVLAAELRAC 149 PGI+IAVDHEGGRVQRF+TDGFT LPAM +LG LWD+DVL ATK AT G+VLAAELRAC Sbjct: 63 PGIVIAVDHEGGRVQRFKTDGFTHLPAMRKLGALWDKDVLAATKAATDVGYVLAAELRAC 122 Query: 150 GIDLSFTPVLDLDYGVSSVIGDRSFHRDPRVVTLMAKSLNHGLALAGMANCGKHFPGHGF 209 G+DLSFTPVLDLDYG S VIGDR+FHRD RVVT++AKSLNHGL LAGM NCGKHFPGHGF Sbjct: 123 GVDLSFTPVLDLDYGESGVIGDRAFHRDARVVTMLAKSLNHGLMLAGMLNCGKHFPGHGF 182 Query: 210 VTADSHVAIPVDERGLDEILGDDATPYDWLGMSLAAVMPAHVIYPKVDAQPAGFSKVWLS 269 V ADSH+ IPVDER L +IL DA PYDWLG+SLA VMPAHVIYPKVD PAGFS+ WL+ Sbjct: 183 VKADSHLEIPVDERELKQILAADAAPYDWLGLSLAGVMPAHVIYPKVDKHPAGFSRKWLT 242 Query: 270 MLRERFGFQGVIFSDDLSMHGASVAGGPLQAAQAALDAGCDVALICNSPDKADAILAGLQ 329 MLR+ FGF G+IFSDDLSM GASVAG + A AAL AGCD+ LICNSPDKAD +LAGLQ Sbjct: 243 MLRKDFGFDGLIFSDDLSMEGASVAGTVIDGAHAALQAGCDMVLICNSPDKADQLLAGLQ 302 Query: 330 GGTDAA---SAARRATLLPCGEALAWDALQADPRYL 362 + A SA R A L P AL WDALQ D RY+ Sbjct: 303 VRDNKATQESAVRIAALTPQSPALTWDALQQDARYI 338 >ref|YP_001100323.1| beta N-acetyl-glucosaminidase [Herminiimonas arsenicoxydans] emb|CAL62200.1| Beta-hexosaminidase (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) [Herminiimonas arsenicoxydans] Length = 357 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 246/338 (72%), Positives = 273/338 (80%), Gaps = 3/338 (0%) Query: 37 LGPVMLDVVGTTLDAADIARLQHPLTGGVILFARNYENRAQLVALTAAIRQARPGILIAV 96 GPVMLDVVGT L A DI R+QHPLTGGVILFARNY+NRAQL LTAAI AR GI+IAV Sbjct: 17 FGPVMLDVVGTELSADDIRRIQHPLTGGVILFARNYKNRAQLTELTAAIHGARAGIVIAV 76 Query: 97 DHEGGRVQRFRTDGFTRLPAMGQLGQLWDRDVLQATKVATATGFVLAAELRACGIDLSFT 156 DHEGGRVQRF+TDGFT LPAM +LG+LWD+DVL ATK AT G+VLAAELRACG+DLSFT Sbjct: 77 DHEGGRVQRFKTDGFTHLPAMRKLGELWDKDVLAATKAATEVGYVLAAELRACGVDLSFT 136 Query: 157 PVLDLDYGVSSVIGDRSFHRDPRVVTLMAKSLNHGLALAGMANCGKHFPGHGFVTADSHV 216 PVLDLDYG S VIGDR+FHRD RVV+L+AKSLNHGL LAGM NCGKHFPGHGFV ADSH+ Sbjct: 137 PVLDLDYGASGVIGDRAFHRDARVVSLLAKSLNHGLMLAGMLNCGKHFPGHGFVKADSHL 196 Query: 217 AIPVDERGLDEILGDDATPYDWLGMSLAAVMPAHVIYPKVDAQPAGFSKVWLSMLRERFG 276 IPVDER L +IL +DA PY +LG+SLA VMPAHVIYPKVD PAGFS+ WL+MLR+ FG Sbjct: 197 EIPVDERELKDILAEDAAPYKYLGLSLAGVMPAHVIYPKVDKHPAGFSRKWLTMLRKDFG 256 Query: 277 FQGVIFSDDLSMHGASVAGGPLQAAQAALDAGCDVALICNSPDKADAILAGLQGGTDAA- 335 F G+IFSDDLSM GASVAG + AAL AGCD+ LICNSPDKAD +LAGL+ A Sbjct: 257 FDGLIFSDDLSMEGASVAGNVVDGGHAALAAGCDMILICNSPDKADQLLAGLKIKDSKAM 316 Query: 336 --SAARRATLLPCGEALAWDALQADPRYLAARALLQSL 371 SAAR A L P ALAW ALQ + RYLAA+ SL Sbjct: 317 TQSAARIAALTPQAPALAWAALQQEVRYLAAKKTALSL 354 >ref|YP_559908.1| beta-hexosaminidase [Burkholderia xenovorans LB400] gb|ABE31856.1| Beta-N-acetylhexosaminidase [Burkholderia xenovorans LB400] Length = 342 Score = 461 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 229/334 (68%), Positives = 269/334 (80%), Gaps = 1/334 (0%) Query: 38 GPVMLDVVGTTLDAADIARLQHPLTGGVILFARNYENRAQLVALTAAIRQARPGILIAVD 97 GPVMLDVVG TL+ D RL HP+TGGVILFAR+YE+RAQL+ALT +IR R +LIAVD Sbjct: 6 GPVMLDVVGKTLNDDDKRRLAHPMTGGVILFARHYESRAQLIALTDSIRAIREDLLIAVD 65 Query: 98 HEGGRVQRFRTDGFTRLPAMGQLGQLWDRDVLQATKVATATGFVLAAELRACGIDLSFTP 157 HEGGRVQRFRTDGFT LPAMG+LG LWD DVL ATKV TA G++LAAELRACGID+SFTP Sbjct: 66 HEGGRVQRFRTDGFTVLPAMGKLGTLWDSDVLHATKVTTAVGYILAAELRACGIDMSFTP 125 Query: 158 VLDLDYGVSSVIGDRSFHRDPRVVTLMAKSLNHGLALAGMANCGKHFPGHGFVTADSHVA 217 VLDL+YG S VIGDRSFHRDPRVVTL+AKSLNHGLALAGM+NCGKHFPGHGF ADSHVA Sbjct: 126 VLDLNYGQSQVIGDRSFHRDPRVVTLLAKSLNHGLALAGMSNCGKHFPGHGFAQADSHVA 185 Query: 218 IPVDERGLDEILGDDATPYDWLGMSLAAVMPAHVIYPKVDAQPAGFSKVWLS-MLRERFG 276 +P+D+R LDEIL DDA PYDWLG+SL +V+PAHV+YPKVD++PAGFS++WL +LR + Sbjct: 186 MPIDDRSLDEILRDDAAPYDWLGLSLGSVIPAHVVYPKVDSKPAGFSRIWLQDILRNKLR 245 Query: 277 FQGVIFSDDLSMHGASVAGGPLQAAQAALDAGCDVALICNSPDKADAILAGLQGGTDAAS 336 F+G IFSDDLSM A G + A AAL AGCD+ LICN PD+A+ +L L+ S Sbjct: 246 FEGAIFSDDLSMEAARQGGTLTEGATAALQAGCDMVLICNQPDEAEKVLDALRFTPSKES 305 Query: 337 AARRATLLPCGEALAWDALQADPRYLAARALLQS 370 R + P G+AL W L A+P+YL A+ALL+S Sbjct: 306 QRRLKRMRPRGKALKWSKLVAEPQYLQAQALLRS 339