BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2355.p         (124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775349.1| hypothetical protein Hsero_1933 [Herbaspiril...   122   1e-26
ref|YP_001353056.1| glutaredoxin 2 [Janthinobacterium sp. Marsei...    95   3e-18
ref|ZP_08274466.1| Glutaredoxin 2 [Oxalobacteraceae bacterium IM...    91   5e-17
ref|ZP_02886564.1| glutaredoxin 2 [Burkholderia graminis C4D1M] ...    80   9e-14
ref|YP_002795460.1| thioredoxin [Laribacter hongkongensis HLHK9]...    78   4e-13

>ref|YP_003775349.1| hypothetical protein Hsero_1933 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63441.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 97

 Score =  122 bits (307), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/91 (65%), Positives = 70/91 (76%)

Query: 30  TLDPQAAPSEPLHFIIYSRSYCHLCEDLRDALRQALGEIPAVIEMVDVDADEALVARYDE 89
           T  P  + S+ L F+IYSRSYCHLCEDLR AL  ALGE  A +EMVDVDAD ALVA+YDE
Sbjct: 4   TSSPTPSGSDALQFLIYSRSYCHLCEDLRGALLAALGETAARVEMVDVDADAALVAQYDE 63

Query: 90  LVPVLMGQGSNGQWQELCHYHLDKARLQAFV 120
           LVPVLMG    G+W +LCHYHLD+A L+ F+
Sbjct: 64  LVPVLMGCDREGRWVQLCHYHLDEAALRKFL 94


>ref|YP_001353056.1| glutaredoxin 2 [Janthinobacterium sp. Marseille]
 gb|ABR90845.1| glutaredoxin 2 [Janthinobacterium sp. Marseille]
          Length = 84

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/80 (53%), Positives = 59/80 (73%)

Query: 41  LHFIIYSRSYCHLCEDLRDALRQALGEIPAVIEMVDVDADEALVARYDELVPVLMGQGSN 100
           + F +YSR+YCHLC+D+  AL+  LG     I ++DVDADEALVA+YDELVPVL+G    
Sbjct: 2   IQFTLYSRTYCHLCDDMLHALQTLLGADSYAINVLDVDADEALVAQYDELVPVLVGHREG 61

Query: 101 GQWQELCHYHLDKARLQAFV 120
              Q++CHY LD+A ++AF+
Sbjct: 62  RAAQQICHYFLDEAAVRAFI 81


>ref|ZP_08274466.1| Glutaredoxin 2 [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF32064.1| Glutaredoxin 2 [Oxalobacteraceae bacterium IMCC9480]
          Length = 85

 Score = 90.9 bits (224), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/80 (55%), Positives = 55/80 (68%)

Query: 41  LHFIIYSRSYCHLCEDLRDALRQALGEIPAVIEMVDVDADEALVARYDELVPVLMGQGSN 100
           +HFI+YSRSYCHLC+D+  ALR  LG + A I + DVD D  L+ +YDELVPVL G+   
Sbjct: 2   IHFILYSRSYCHLCDDMLTALRTELGTLAADISVFDVDEDPLLLEKYDELVPVLTGRHDL 61

Query: 101 GQWQELCHYHLDKARLQAFV 120
           G  +EL HY LD  RL  F+
Sbjct: 62  GPERELGHYFLDTERLSQFI 81


>ref|ZP_02886564.1| glutaredoxin 2 [Burkholderia graminis C4D1M]
 gb|EDT07793.1| glutaredoxin 2 [Burkholderia graminis C4D1M]
          Length = 91

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 5/80 (6%)

Query: 38  SEPLHFIIYSRSYCHLCEDLRDALRQALGEIPAVIEMVDVDADEALVARYDELVPVLMGQ 97
           +E     +Y R++CHLC+D+R AL   L E  A +E+VDVD+D  L ARY+ELVPVL+  
Sbjct: 2   TERAPLTLYGRAWCHLCDDMRAALELLLAEFGAQVEVVDVDSDPLLEARYNELVPVLLCD 61

Query: 98  GSNGQWQELCHYHLDKARLQ 117
           G      ELCHYHLD++R++
Sbjct: 62  GV-----ELCHYHLDESRVR 76


>ref|YP_002795460.1| thioredoxin [Laribacter hongkongensis HLHK9]
 gb|ACO74451.1| thioredoxin [Laribacter hongkongensis HLHK9]
          Length = 82

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 4/82 (4%)

Query: 42  HFIIYSRSYCHLCEDLRDALRQALGEIPAVIEMVDVDADEALVARYDELVPVLMGQGSNG 101
            F +Y R YC LC  +RDAL+  +      +E+VDVDADEALVAR+DELVPVL+G   + 
Sbjct: 4   QFTLYYRDYCSLCHAMRDALKPYVAAGQLALEIVDVDADEALVARFDELVPVLVGPDGH- 62

Query: 102 QWQELCHYHLDKARLQAFVTEM 123
              E+CH+H    RL A++ E+
Sbjct: 63  ---EVCHWHFAPERLAAYLAEI 81