BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2341.p (176 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775336.1| metal-binding, possibly nucleic acid-binding... 276 8e-73 ref|YP_004753535.1| hypothetical protein CFU_2886 [Collimonas fu... 199 2e-49 ref|YP_001100345.1| hypothetical protein HEAR2080 [Herminiimonas... 189 1e-46 ref|YP_001353043.1| hypothetical protein mma_1353 [Janthinobacte... 184 6e-45 ref|ZP_04578173.1| conserved hypothetical protein [Oxalobacter f... 145 2e-33 >ref|YP_003775336.1| metal-binding, possibly nucleic acid-binding protein [Herbaspirillum seropedicae SmR1] gb|ADJ63428.1| metal-binding, possibly nucleic acid-binding protein [Herbaspirillum seropedicae SmR1] Length = 166 Score = 276 bits (706), Expect = 8e-73, Method: Composition-based stats. Identities = 154/166 (92%), Positives = 157/166 (94%), Gaps = 1/166 (0%) Query: 12 MNAFVIDAFEFCRLKQQAQGEIPVAELGRLAQETVDRSGAIHWTLSGDIDKLGHAQLSLA 71 MNAFVIDAF+FCRLKQQAQGEIPVAELGRLAQETVDRSG I W LSGDIDKLGHAQLSLA Sbjct: 1 MNAFVIDAFDFCRLKQQAQGEIPVAELGRLAQETVDRSGTIRWALSGDIDKLGHAQLSLA 60 Query: 72 VSGAVNLICQRCLTALNFEIDSKSLLVLAKDEAQADTIEELLDDDEIDVIVGSAAFDVNY 131 VSGAVNLICQRCLTALNFEIDSKSLLVLAKDEAQAD IEELLDDDEIDVIVGSAAFDVNY Sbjct: 61 VSGAVNLICQRCLTALNFEIDSKSLLVLAKDEAQADAIEELLDDDEIDVIVGSAAFDVNY 120 Query: 132 LIEDDALLALPVAPKHDVCPD-GSVAAEAKGAERASPFEVLKKLKQ 176 LIED+ALLALPVAPKHD CP+ GS A EAK AERASPFEVLKKLKQ Sbjct: 121 LIEDEALLALPVAPKHDKCPEGGSAAVEAKSAERASPFEVLKKLKQ 166 >ref|YP_004753535.1| hypothetical protein CFU_2886 [Collimonas fungivorans Ter331] gb|AEK62712.1| hypothetical protein CFU_2886 [Collimonas fungivorans Ter331] Length = 186 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 98/167 (58%), Positives = 129/167 (77%) Query: 10 LAMNAFVIDAFEFCRLKQQAQGEIPVAELGRLAQETVDRSGAIHWTLSGDIDKLGHAQLS 69 L M+AFVIDAFE+ R K++ +G+ VA+L RL+ ET DRSGA+HW L+G D+LGH QL+ Sbjct: 19 LTMSAFVIDAFEYARHKERREGDTLVADLSRLSAETADRSGALHWVLAGGADQLGHPQLT 78 Query: 70 LAVSGAVNLICQRCLTALNFEIDSKSLLVLAKDEAQADTIEELLDDDEIDVIVGSAAFDV 129 L VSG+ ++CQRCLT+ F+IDS+S+LVLAKDE AD I+ LLD+DEIDVIVG+ ++ Sbjct: 79 LTVSGSTKIMCQRCLTSFAFDIDSESVLVLAKDEESADAIDALLDNDEIDVIVGTKTLNI 138 Query: 130 NYLIEDDALLALPVAPKHDVCPDGSVAAEAKGAERASPFEVLKKLKQ 176 L+ED+ALLALP++PKH VCPD S K A++ SPF +LK LKQ Sbjct: 139 VELVEDEALLALPLSPKHPVCPDQSALEGLKSAKKESPFAMLKNLKQ 185 >ref|YP_001100345.1| hypothetical protein HEAR2080 [Herminiimonas arsenicoxydans] emb|CAL62222.1| conserved hypothetical protein; putative metal-binding protein [Herminiimonas arsenicoxydans] Length = 165 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 96/165 (58%), Positives = 128/165 (77%) Query: 12 MNAFVIDAFEFCRLKQQAQGEIPVAELGRLAQETVDRSGAIHWTLSGDIDKLGHAQLSLA 71 M+AFVIDAFEF RLK++ +G++PVA + RLA ETV+ S ++HW+L G D L H QL ++ Sbjct: 1 MSAFVIDAFEFSRLKERREGDVPVASMARLAAETVNTSASLHWSLQGGSDTLNHPQLIMS 60 Query: 72 VSGAVNLICQRCLTALNFEIDSKSLLVLAKDEAQADTIEELLDDDEIDVIVGSAAFDVNY 131 VSG+V L+CQRC+T L F I+S+S+L+LAKDE +AD I+ LL DD IDVIVGS A +V Sbjct: 61 VSGSVELMCQRCMTPLKFAIESESILILAKDEERADEIDALLADDTIDVIVGSKALNVME 120 Query: 132 LIEDDALLALPVAPKHDVCPDGSVAAEAKGAERASPFEVLKKLKQ 176 LIED+ALLALP+APKHDVCP+ + + ++ SPF+VLK +KQ Sbjct: 121 LIEDEALLALPLAPKHDVCPNNAALNDLMVTKKPSPFDVLKGMKQ 165 >ref|YP_001353043.1| hypothetical protein mma_1353 [Janthinobacterium sp. Marseille] gb|ABR91410.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 165 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 91/165 (55%), Positives = 125/165 (75%) Query: 12 MNAFVIDAFEFCRLKQQAQGEIPVAELGRLAQETVDRSGAIHWTLSGDIDKLGHAQLSLA 71 MNAFVIDAFEF R ++Q +G++ +A+L RLA E+V+ ++HW+L G D LGH QL ++ Sbjct: 1 MNAFVIDAFEFSRHREQREGDVAIADLPRLAAESVNMPASLHWSLHGGTDGLGHPQLIMS 60 Query: 72 VSGAVNLICQRCLTALNFEIDSKSLLVLAKDEAQADTIEELLDDDEIDVIVGSAAFDVNY 131 VSG+++L+CQRC+T L +I S+S+L+LAK++ AD I+ LL DD IDVIVGS +V Sbjct: 61 VSGSIHLMCQRCMTPLKLDIASESVLILAKNDEHADEIDALLADDTIDVIVGSKTLNVTD 120 Query: 132 LIEDDALLALPVAPKHDVCPDGSVAAEAKGAERASPFEVLKKLKQ 176 LIED+ALLA+P+APKHDVCPD + A A + SPF+VLK +KQ Sbjct: 121 LIEDEALLAIPLAPKHDVCPDNAAVESAMSARKPSPFDVLKGMKQ 165 >ref|ZP_04578173.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] gb|EEO29146.1| conserved hypothetical protein [Oxalobacter formigenes OXCC13] Length = 166 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 75/166 (45%), Positives = 113/166 (68%), Gaps = 3/166 (1%) Query: 12 MNAFVIDAFEFCRLKQQAQGEIPVAELGRLAQETVDRSGAIHWTLSGDIDKLGHAQLSLA 71 MN+++ID FEFCR +G ++EL RL+ D++G + W ++G ++K +LSL Sbjct: 1 MNSYLIDPFEFCRNGGSLKGNASLSELNRLSAVCADQAGELKWEVTGTVNKRNQPELSLE 60 Query: 72 VSGAVNLICQRCLTALNFEIDSKSLLVLAKDEAQADTIEELL-DDDEIDVIVGSAAFDVN 130 VSG VNL+CQRCL+ L F++DS++ +++AK E QAD +EE L ++D ++VIV +V Sbjct: 61 VSGTVNLMCQRCLSPLVFDVDSETTVLVAKTEEQADEMEETLGNEDSVEVIVADGKINVL 120 Query: 131 YLIEDDALLALPVAPKHDVCPDGSVAAEAKGAERASPFEVLKKLKQ 176 LIED+ALL+LP++ KH+VCPD S+ + SPF VL KLK+ Sbjct: 121 DLIEDEALLSLPLSSKHEVCPDSSMGELKNNIQ--SPFSVLGKLKK 164