BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2296.p         (249 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775297.1| oxygen-binding protein [Herbaspirillum serop...   270   1e-70
ref|ZP_02910048.1| globin [Burkholderia ambifaria MEX-5] >gi|171...   223   2e-56
ref|YP_441584.1| hypothetical protein BTH_I1030 [Burkholderia th...   202   3e-50
ref|ZP_02373262.1| protozoan/cyanobacterial globin family protei...   202   6e-50
ref|YP_002231497.1| putative globin [Burkholderia cenocepacia J2...   199   3e-49

>ref|YP_003775297.1| oxygen-binding protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63389.1| oxygen-binding protein (globin) [Herbaspirillum seropedicae SmR1]
          Length = 133

 Score =  270 bits (690), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 132/133 (99%), Positives = 133/133 (100%)

Query: 117 MQIEDPNQPTTFELIGGAEKLREMVDRFYDLMDLEPEFAGIRALHPPSLDGSREKTYMFL 176
           MQIEDPNQPTTFELIGGAEKLREMVDRFYDLMDLEPEFAGIRALHPPSL+GSREKTYMFL
Sbjct: 1   MQIEDPNQPTTFELIGGAEKLREMVDRFYDLMDLEPEFAGIRALHPPSLEGSREKTYMFL 60

Query: 177 SGWTGGPSLYMEKFGHPRLRARHLPFPIGISERDQWLRCMTWAMQDVGLPEDLMKRLLAA 236
           SGWTGGPSLYMEKFGHPRLRARHLPFPIGISERDQWLRCMTWAMQDVGLPEDLMKRLLAA
Sbjct: 61  SGWTGGPSLYMEKFGHPRLRARHLPFPIGISERDQWLRCMTWAMQDVGLPEDLMKRLLAA 120

Query: 237 LYQTADWMRNKPE 249
           LYQTADWMRNKPE
Sbjct: 121 LYQTADWMRNKPE 133


>ref|ZP_02910048.1| globin [Burkholderia ambifaria MEX-5]
 gb|EDT38810.1| globin [Burkholderia ambifaria MEX-5]
          Length = 443

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 119/218 (54%), Positives = 140/218 (64%), Gaps = 2/218 (0%)

Query: 33  RWPACWRPAGRPASAGRWRITSSISTGVSARWCGWRAWGWARLARPLAAGPDCATCCAVR 92
           R PA WR   R  SAG      S S+ +S R     A   A  A    AG  C  CC   
Sbjct: 225 RSPARWRRPARSRSAGCSHRACSTSSWLSIRGSCRPASRPASHAPVRPAGSACIMCCGAP 284

Query: 93  RCRPCARPDPKQIKQGRLRYHGGLMQIED--PNQPTTFELIGGAEKLREMVDRFYDLMDL 150
           RC  CA P+ ++  +        +  + D  P+QPT FEL+GG  ++REMVDRFYDLMDL
Sbjct: 285 RCSRCATPERRRRPRISRFRLSVMTDVNDDAPSQPTAFELVGGEARVREMVDRFYDLMDL 344

Query: 151 EPEFAGIRALHPPSLDGSREKTYMFLSGWTGGPSLYMEKFGHPRLRARHLPFPIGISERD 210
           EPEFA IRALHP SLDGSR+K + FL GW GGP  Y+ +FGHPRLRARHLPFPI   ERD
Sbjct: 345 EPEFAEIRALHPASLDGSRDKLFWFLCGWLGGPDHYISRFGHPRLRARHLPFPIASVERD 404

Query: 211 QWLRCMTWAMQDVGLPEDLMKRLLAALYQTADWMRNKP 248
           QWLRCM WAM+D GLPE L +RL+ + Y TADWMRN+P
Sbjct: 405 QWLRCMAWAMEDTGLPEPLRERLMHSFYDTADWMRNRP 442


>ref|YP_441584.1| hypothetical protein BTH_I1030 [Burkholderia thailandensis E264]
 gb|ABC36858.1| protozoan/cyanobacterial globin family protein [Burkholderia
           thailandensis E264]
          Length = 164

 Score =  202 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 94/127 (74%), Positives = 109/127 (85%)

Query: 122 PNQPTTFELIGGAEKLREMVDRFYDLMDLEPEFAGIRALHPPSLDGSREKTYMFLSGWTG 181
           P+QPT FEL+GG  ++RE+VDRFYDLMDLEPEFAGIRALHPP+LDGSR+K + FL GW G
Sbjct: 37  PSQPTAFELVGGEARVRELVDRFYDLMDLEPEFAGIRALHPPTLDGSRDKLFWFLCGWLG 96

Query: 182 GPSLYMEKFGHPRLRARHLPFPIGISERDQWLRCMTWAMQDVGLPEDLMKRLLAALYQTA 241
           GP  Y+E+FGHPRLRARHLPFPI  SERDQWLRC+ WAMQDVGL E L +RL+ + Y TA
Sbjct: 97  GPDHYIERFGHPRLRARHLPFPIASSERDQWLRCIAWAMQDVGLDEPLRERLMHSFYDTA 156

Query: 242 DWMRNKP 248
           DWMRN+P
Sbjct: 157 DWMRNRP 163


>ref|ZP_02373262.1| protozoan/cyanobacterial globin family protein [Burkholderia
           thailandensis TXDOH]
 ref|ZP_02387125.1| protozoan/cyanobacterial globin family protein [Burkholderia
           thailandensis Bt4]
 ref|ZP_05587985.1| hypothetical protein BthaA_11056 [Burkholderia thailandensis E264]
          Length = 136

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 94/127 (74%), Positives = 109/127 (85%)

Query: 122 PNQPTTFELIGGAEKLREMVDRFYDLMDLEPEFAGIRALHPPSLDGSREKTYMFLSGWTG 181
           P+QPT FEL+GG  ++RE+VDRFYDLMDLEPEFAGIRALHPP+LDGSR+K + FL GW G
Sbjct: 9   PSQPTAFELVGGEARVRELVDRFYDLMDLEPEFAGIRALHPPTLDGSRDKLFWFLCGWLG 68

Query: 182 GPSLYMEKFGHPRLRARHLPFPIGISERDQWLRCMTWAMQDVGLPEDLMKRLLAALYQTA 241
           GP  Y+E+FGHPRLRARHLPFPI  SERDQWLRC+ WAMQDVGL E L +RL+ + Y TA
Sbjct: 69  GPDHYIERFGHPRLRARHLPFPIASSERDQWLRCIAWAMQDVGLDEPLRERLMHSFYDTA 128

Query: 242 DWMRNKP 248
           DWMRN+P
Sbjct: 129 DWMRNRP 135


>ref|YP_002231497.1| putative globin [Burkholderia cenocepacia J2315]
 emb|CAR52674.1| putative globin [Burkholderia cenocepacia J2315]
          Length = 136

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 94/127 (74%), Positives = 107/127 (84%)

Query: 122 PNQPTTFELIGGAEKLREMVDRFYDLMDLEPEFAGIRALHPPSLDGSREKTYMFLSGWTG 181
           P+QPT FEL+GG  ++REMVDRFYDLMDLEPEFA IRALHPPSLDGSR+K + FL GW G
Sbjct: 9   PSQPTAFELVGGEARVREMVDRFYDLMDLEPEFAQIRALHPPSLDGSRDKLFWFLCGWLG 68

Query: 182 GPSLYMEKFGHPRLRARHLPFPIGISERDQWLRCMTWAMQDVGLPEDLMKRLLAALYQTA 241
           GP  Y+ +FGHPRLRARHLPFPI   ERDQWLRCM WAM+DVGLPE L +RL+ + Y TA
Sbjct: 69  GPDHYISRFGHPRLRARHLPFPIASVERDQWLRCMAWAMEDVGLPEPLRERLMHSFYDTA 128

Query: 242 DWMRNKP 248
           DWMRN+P
Sbjct: 129 DWMRNRP 135