BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2292.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775293.1| threonine efflux protein [Herbaspirillum ser... 362 2e-98 ref|ZP_08275534.1| putative homoserine/homoserine lactone efflux... 258 6e-67 ref|YP_549474.1| lysine exporter protein LysE/YggA [Polaromonas ... 253 2e-65 ref|ZP_04762419.1| Lysine exporter protein (LYSE/YGGA) [Acidovor... 229 2e-58 ref|YP_987733.1| lysine exporter protein LysE/YggA [Acidovorax s... 228 7e-58 >ref|YP_003775293.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] gb|ADJ63385.1| threonine efflux protein [Herbaspirillum seropedicae SmR1] Length = 219 Score = 362 bits (929), Expect = 2e-98, Method: Composition-based stats. Identities = 199/217 (91%), Positives = 209/217 (96%) Query: 1 MAYQTWFAFFLAACVIAISPGSGAVLSMSHGLNYGLRRTTATILGLEIALVVVLIIAGAG 60 M YQTWFAFF AACVIAISPGSGAVLSMSHGLNYG+RRT+ATILGLEIALVV+LIIAGAG Sbjct: 1 MDYQTWFAFFAAACVIAISPGSGAVLSMSHGLNYGVRRTSATILGLEIALVVILIIAGAG 60 Query: 61 VGSLLVASETAFNVVKIAGALYLIYLGFSQWRARVPSEQEGEALDNANAVARAQRGQHWW 120 VGSLLVASETAFNV+K+AGALYLIYLGFSQWRARVPSE++GEALD ANA ARA Q WW Sbjct: 61 VGSLLVASETAFNVIKVAGALYLIYLGFSQWRARVPSEEQGEALDAANASARAHARQTWW 120 Query: 121 QRCMTGFLTNATNPKGIVFMVAVLPQFIDHERPLWLQLLVLAVTMVAVDLVVMHGYAFAA 180 QRCMTGFLTNATNPKGIVFMVAVLPQFIDH+RPLWLQLLVLAVTMVAVDLVVMHGYAFAA Sbjct: 121 QRCMTGFLTNATNPKGIVFMVAVLPQFIDHDRPLWLQLLVLAVTMVAVDLVVMHGYAFAA 180 Query: 181 SRLQRFFRSQKAIKAQNRFFGGVLMLVGAGLFFFKRS 217 SRLQRFFRSQKAI+AQNRFFGGVLMLVGAGLFFFKR+ Sbjct: 181 SRLQRFFRSQKAIRAQNRFFGGVLMLVGAGLFFFKRT 217 >ref|ZP_08275534.1| putative homoserine/homoserine lactone efflux protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF30998.1| putative homoserine/homoserine lactone efflux protein [Oxalobacteraceae bacterium IMCC9480] Length = 213 Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats. Identities = 142/217 (65%), Positives = 168/217 (77%), Gaps = 6/217 (2%) Query: 1 MAYQTWFAFFLAACVIAISPGSGAVLSMSHGLNYGLRRTTATILGLEIALVVVLIIAGAG 60 M TW F +AAC+IAISPGSGAVLSMSHGL+YG++RT+ TILGL+ L+++L+IAGAG Sbjct: 1 MTLATWITFVVAACIIAISPGSGAVLSMSHGLSYGVKRTSVTILGLQAGLLMILVIAGAG 60 Query: 61 VGSLLVASETAFNVVKIAGALYLIYLGFSQWRARVPSEQEGEALDNANAVARAQRGQHWW 120 VGSLL+ASE AFN VKI GALYLIYLG SQWRARV + D + ++ A W Sbjct: 61 VGSLLLASEVAFNAVKIVGALYLIYLGISQWRARVDVD------DTSPHLSAAADIPGWK 114 Query: 121 QRCMTGFLTNATNPKGIVFMVAVLPQFIDHERPLWLQLLVLAVTMVAVDLVVMHGYAFAA 180 +R MTGFLTNATNPKGI+FMVAVLPQFI E L QLL+L +TM A+DL+VMH YAFAA Sbjct: 115 KRLMTGFLTNATNPKGIIFMVAVLPQFITGEAALLPQLLILGITMCAIDLMVMHSYAFAA 174 Query: 181 SRLQRFFRSQKAIKAQNRFFGGVLMLVGAGLFFFKRS 217 S +QR+FR +A+K QNRFFG VLM VGA LFF KRS Sbjct: 175 SSMQRYFRDARAMKKQNRFFGSVLMAVGAALFFVKRS 211 >ref|YP_549474.1| lysine exporter protein LysE/YggA [Polaromonas sp. JS666] gb|ABE44576.1| Lysine exporter protein (LYSE/YGGA) [Polaromonas sp. JS666] Length = 217 Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats. Identities = 141/219 (64%), Positives = 171/219 (78%), Gaps = 5/219 (2%) Query: 1 MAYQTWFAFFLAACVIAISPGSGAVLSMSHGLNYGLRRTTATILGLEIALVVVLIIAGAG 60 MA TW A+FLA+ +IAISPGSGAVL+MSHGL+YG++RT ATI GL+ L+++L++AGAG Sbjct: 1 MAIDTWTAYFLASILIAISPGSGAVLAMSHGLSYGVKRTQATIAGLQAGLLMILVVAGAG 60 Query: 61 VGSLLVASETAFNVVKIAGALYLIYLGFSQWRARVPSEQEGEALDNANAVARAQRGQHWW 120 VGSLL+ASE AFNVVKI GA YL+Y+G+SQWR+ + ++ A A Sbjct: 61 VGSLLLASELAFNVVKILGAAYLMYIGWSQWRS-----SDAIMTNDVGAPATEASVPSSR 115 Query: 121 QRCMTGFLTNATNPKGIVFMVAVLPQFIDHERPLWLQLLVLAVTMVAVDLVVMHGYAFAA 180 +RC+TG LTNATNPKGI+FMVAVLPQFI RPLWLQLLV+A+T VAVD VVMHGYAFAA Sbjct: 116 KRCLTGLLTNATNPKGILFMVAVLPQFISQGRPLWLQLLVIAITTVAVDTVVMHGYAFAA 175 Query: 181 SRLQRFFRSQKAIKAQNRFFGGVLMLVGAGLFFFKRSPQ 219 SRLQ F++ +AIK QNR FGG+LM VGAGLFF KR Q Sbjct: 176 SRLQPLFKNARAIKVQNRLFGGLLMAVGAGLFFVKRGQQ 214 >ref|ZP_04762419.1| Lysine exporter protein (LYSE/YGGA) [Acidovorax delafieldii 2AN] gb|EER60755.1| Lysine exporter protein (LYSE/YGGA) [Acidovorax delafieldii 2AN] Length = 212 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 138/219 (63%), Positives = 168/219 (76%), Gaps = 9/219 (4%) Query: 1 MAYQTWFAFFLAACVIAISPGSGAVLSMSHGLNYGLRRTTATILGLEIALVVVLIIAGAG 60 M TW AFF A+C+IA+SPGSGAVLSMSHGL+YG+R+T ATILGL++ L+++L+IAGAG Sbjct: 1 MDLHTWLAFFAASCLIAVSPGSGAVLSMSHGLSYGVRKTGATILGLQMGLLLILLIAGAG 60 Query: 61 VGSLLVASETAFNVVKIAGALYLIYLGFSQWRARVPSEQEGEALDNANAVARAQRGQHWW 120 VGSLL+ASE AF+VVK+ GA YLIY+G+SQWRA S G+ A W Sbjct: 61 VGSLLLASEVAFSVVKVLGACYLIYVGWSQWRAGAASPLHGD---------EAAPAGPWQ 111 Query: 121 QRCMTGFLTNATNPKGIVFMVAVLPQFIDHERPLWLQLLVLAVTMVAVDLVVMHGYAFAA 180 +RC+TGFLTNATNPKGI+FMVAVLPQF+ RPLW+QLLV+A T VAVD+ VMHGYA A Sbjct: 112 KRCLTGFLTNATNPKGIIFMVAVLPQFMTDSRPLWMQLLVMAATTVAVDVTVMHGYAAGA 171 Query: 181 SRLQRFFRSQKAIKAQNRFFGGVLMLVGAGLFFFKRSPQ 219 S L+ RS +A++ QNR FGG+LM VGAGLFF KR Q Sbjct: 172 SALRSLMRSARAVRTQNRVFGGLLMAVGAGLFFVKRGGQ 210 >ref|YP_987733.1| lysine exporter protein LysE/YggA [Acidovorax sp. JS42] gb|ABM43657.1| Lysine exporter protein (LYSE/YGGA) [Acidovorax sp. JS42] Length = 212 Score = 228 bits (580), Expect = 7e-58, Method: Composition-based stats. Identities = 138/219 (63%), Positives = 170/219 (77%), Gaps = 9/219 (4%) Query: 1 MAYQTWFAFFLAACVIAISPGSGAVLSMSHGLNYGLRRTTATILGLEIALVVVLIIAGAG 60 M + TW AFF A+ VIAISPGSGAVLSMSHGL+YG+R+ ATILGLE+ L+++L++AGAG Sbjct: 1 MDWHTWMAFFAASWVIAISPGSGAVLSMSHGLSYGVRKAGATILGLELGLLLILVVAGAG 60 Query: 61 VGSLLVASETAFNVVKIAGALYLIYLGFSQWRARVPSEQEGEALDNANAVARAQRGQHWW 120 VGSLLVASE AF++VK+ GA YLIYLGF QWRA +G+ +AQ W Sbjct: 61 VGSLLVASELAFSIVKVLGACYLIYLGFMQWRAGAAGTLQGD--------LQAQPAS-WR 111 Query: 121 QRCMTGFLTNATNPKGIVFMVAVLPQFIDHERPLWLQLLVLAVTMVAVDLVVMHGYAFAA 180 +R +TG LTNATNPKGI+FMVAVLPQF+ RPLW QLLV+AVTM++VDL+VM+GYA +A Sbjct: 112 RRVLTGLLTNATNPKGIIFMVAVLPQFMTDTRPLWSQLLVMAVTMLSVDLIVMNGYAASA 171 Query: 181 SRLQRFFRSQKAIKAQNRFFGGVLMLVGAGLFFFKRSPQ 219 S L+ RS +A++ QNR FGG+LMLVGAGLFF KR Q Sbjct: 172 SALRTLMRSGRAMRTQNRVFGGLLMLVGAGLFFVKRGTQ 210