BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2285.p (525 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775286.1| signal peptide protein [Herbaspirillum serop... 475 e-132 ref|YP_001352556.1| hypothetical protein mma_0866 [Janthinobacte... 191 3e-46 ref|ZP_08274353.1| TPR repeat-containing protein [Oxalobacterace... 184 4e-44 ref|YP_001099210.1| hypothetical protein HEAR0899 [Herminiimonas... 177 3e-42 gb|EGW61531.1| Tetratricopeptide TPR_1 repeat-containing protein... 159 1e-36 >ref|YP_003775286.1| signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ63378.1| signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 539 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 472/550 (85%), Positives = 497/550 (90%), Gaps = 36/550 (6%) Query: 1 MAPESQEQTSIHGLRGLISKTAHKTAVLSSLVAALFGVPATLAHASEMSDINKLMRAGQY 60 MAPESQEQT IHGLR LISKTAHKTAV+SSLVAALF PA+LAHASEMSDINKLMRAGQY Sbjct: 1 MAPESQEQTPIHGLRDLISKTAHKTAVMSSLVAALFAAPASLAHASEMSDINKLMRAGQY 60 Query: 61 ADALTKTDAVLAKHPRDAQLRFTKGLILAEQNRSAEAIAVFSKLTEDFPDLPEPYNNLAV 120 A+ALTKTDAVLAKHPRDAQLRFTKGLILAEQNRSAEAIAVF+KLTEDFPDLPEPYNNLAV Sbjct: 61 AEALTKTDAVLAKHPRDAQLRFTKGLILAEQNRSAEAIAVFTKLTEDFPDLPEPYNNLAV 120 Query: 121 LYAADGQYDKARAALDMAMRTNPTYATALENLGDVYAKLASQAYDKALQIDPGANVPQPK 180 LYAADGQYDKARAALDMAMRTNPTYATALENLGDVYAKLASQAYDKALQIDPGANVPQPK Sbjct: 121 LYAADGQYDKARAALDMAMRTNPTYATALENLGDVYAKLASQAYDKALQIDPGANVPQPK 180 Query: 181 LTLLRSLNGNTTGGTVPRLASAASAQRDAKAKAEAAAAEQQERNRALAAEKLAQQAAADK 240 LTLLRSLNGNTTGGTVPRLASAA+AQR+AKAKAEA+AAEQQ+R +ALAAEKLAQQAAADK Sbjct: 181 LTLLRSLNGNTTGGTVPRLASAAAAQREAKAKAEASAAEQQQRAKALAAEKLAQQAAADK 240 Query: 241 AEAEKTAISKATS-------------------------EKEKAAADKAAAEKAAADKAAA 275 AEAEK AISKATS +KAAADKAAA+KAAADKAAA Sbjct: 241 AEAEKNAISKATSEKEKAAADKAAAEKAAADKAAADKAAADKAAADKAAADKAAADKAAA 300 Query: 276 DKAAAEKAAADRAAADRAKAEKARAEQLAAEQARAQKAAADKAAAEQKQKELQAQKDKEQ 335 DKAAAEKAAAD+AAA++A+AEKARAEQLAAEQARAQKAAA+KAAAEQKQKEL AQKDKEQ Sbjct: 301 DKAAAEKAAADKAAAEKARAEKARAEQLAAEQARAQKAAAEKAAAEQKQKELLAQKDKEQ 360 Query: 336 ADKLAREQAARAEKDKAAQAAAEKAQADKLAAAEKAKAEKLAAAEKAKAEKLAAAEKAKA 395 A+KLAREQAARAEK+KAAQAAA+KA+ADKLAAAEKAKA+KLAAAEKAKA+K A Sbjct: 361 AEKLAREQAARAEKEKAAQAAADKAKADKLAAAEKAKADKLAAAEKAKADKARAD----- 415 Query: 396 DKARADKEKAKAEASAEQDKAVVLAALNGWAKAWSDKDVRSYLGHYASDFETPRGASRKE 455 KEKAK +ASAEQDK VLAALNGWAKAWSDKDVR YLGHYASDF+TP+GASRKE Sbjct: 416 ------KEKAKEQASAEQDKTAVLAALNGWAKAWSDKDVRGYLGHYASDFDTPKGASRKE 469 Query: 456 WAEERRARIEDKGRISVKVSNATVSINGNIATVRYRQIYNSDRLTVDSRKTLIFVKQGNR 515 WAEERRARIEDKGRISVKVSNATVSINGN ATVRYRQIYNSDRLTVDSRKTLIFVKQGNR Sbjct: 470 WAEERRARIEDKGRISVKVSNATVSINGNTATVRYRQIYNSDRLTVDSRKTLIFVKQGNR 529 Query: 516 WLIKQERSGG 525 WLIKQERSGG Sbjct: 530 WLIKQERSGG 539 >ref|YP_001352556.1| hypothetical protein mma_0866 [Janthinobacterium sp. Marseille] gb|ABR91353.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 384 Score = 191 bits (485), Expect = 3e-46, Method: Composition-based stats. Identities = 113/159 (71%), Positives = 137/159 (86%) Query: 37 GVPATLAHASEMSDINKLMRAGQYADALTKTDAVLAKHPRDAQLRFTKGLILAEQNRSAE 96 GV A+ A A E++D+++L+RAGQ+A ALTK DA L+K+PRDAQ+RF KG+IL EQN+SAE Sbjct: 29 GVYASSAMADELADVSQLLRAGQHAQALTKADAFLSKNPRDAQMRFLKGVILTEQNKSAE 88 Query: 97 AIAVFSKLTEDFPDLPEPYNNLAVLYAADGQYDKARAALDMAMRTNPTYATALENLGDVY 156 AI +F+KLTED+P LPEPYNNLAVLYA+ GQYDKAR ALDMA+RTNPTYATA ENLGDV+ Sbjct: 89 AITIFTKLTEDYPTLPEPYNNLAVLYASSGQYDKARTALDMAIRTNPTYATAYENLGDVH 148 Query: 157 AKLASQAYDKALQIDPGANVPQPKLTLLRSLNGNTTGGT 195 AKLASQAYDKALQ+D + KLT++R+L GNTTGGT Sbjct: 149 AKLASQAYDKALQLDNSNTAAKSKLTMVRTLVGNTTGGT 187 Score = 127 bits (318), Expect = 7e-27, Method: Composition-based stats. Identities = 70/107 (65%), Positives = 85/107 (79%) Query: 418 VLAALNGWAKAWSDKDVRSYLGHYASDFETPRGASRKEWAEERRARIEDKGRISVKVSNA 477 V++A+N WAKAWS +DV+ YL YA DF P G SRK+WA+ERRARIEDKGRISVK+ Sbjct: 277 VMSAVNAWAKAWSARDVKGYLNAYAGDFVLPAGQSRKDWADERRARIEDKGRISVKIETP 336 Query: 478 TVSINGNIATVRYRQIYNSDRLTVDSRKTLIFVKQGNRWLIKQERSG 524 VS+ GN ATV++RQIY+SDR +SRKTL+ KQGN+W IKQERSG Sbjct: 337 QVSVTGNTATVKFRQIYDSDRTKANSRKTLVMTKQGNKWHIKQERSG 383 >ref|ZP_08274353.1| TPR repeat-containing protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32176.1| TPR repeat-containing protein [Oxalobacteraceae bacterium IMCC9480] Length = 339 Score = 184 bits (466), Expect = 4e-44, Method: Composition-based stats. Identities = 106/151 (70%), Positives = 127/151 (84%) Query: 48 MSDINKLMRAGQYADALTKTDAVLAKHPRDAQLRFTKGLILAEQNRSAEAIAVFSKLTED 107 M+DI+ L+RAGQ+ +ALTK DA L + PRD QLRF KG+IL EQN+ EAI VF+KLTED Sbjct: 1 MADISTLIRAGQFGEALTKVDAALIQTPRDKQLRFMKGVILTEQNKPGEAIVVFTKLTED 60 Query: 108 FPDLPEPYNNLAVLYAADGQYDKARAALDMAMRTNPTYATALENLGDVYAKLASQAYDKA 167 FP+LPEPYNNLAVL+AA GQYDKARA+L+MA+RTNPTY+TA ENLGDVYAKLASQAYDKA Sbjct: 61 FPELPEPYNNLAVLFAAGGQYDKARASLEMAIRTNPTYSTAHENLGDVYAKLASQAYDKA 120 Query: 168 LQIDPGANVPQPKLTLLRSLNGNTTGGTVPR 198 LQ+D + KLT++R+L GN TGGT P+ Sbjct: 121 LQLDSANTTAKTKLTMVRTLVGNNTGGTNPK 151 Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats. Identities = 55/161 (34%), Positives = 91/161 (56%) Query: 364 KLAAAEKAKAEKLAAAEKAKAEKLAAAEKAKADKARADKEKAKAEASAEQDKAVVLAALN 423 KL + K E + A ++A E K + + + D+ + + Sbjct: 178 KLDPKPEPKLEAKPEPKPAPKVEVAKVEAKVEPKPKPEPKPVAKAPVVSADQEEITNVIY 237 Query: 424 GWAKAWSDKDVRSYLGHYASDFETPRGASRKEWAEERRARIEDKGRISVKVSNATVSING 483 WAKAW+ +DV++YL +YASDFE G SRK W ++R+ RI+ I++K+ V++NG Sbjct: 238 SWAKAWAAEDVQAYLAYYASDFEPTNGLSRKAWVQQRQDRIKGNDNITIKIETPKVTVNG 297 Query: 484 NIATVRYRQIYNSDRLTVDSRKTLIFVKQGNRWLIKQERSG 524 + AT +++Q Y S ++ ++ KT++ KQG +WLIKQER+G Sbjct: 298 STATAKFQQAYTSKQVRSNAPKTMVMTKQGGKWLIKQERTG 338 >ref|YP_001099210.1| hypothetical protein HEAR0899 [Herminiimonas arsenicoxydans] emb|CAL61083.1| Conserved hypothetical protein; putative exported protein; TPR repeat [Herminiimonas arsenicoxydans] Length = 380 Score = 177 bits (450), Expect = 3e-42, Method: Composition-based stats. Identities = 109/166 (65%), Positives = 137/166 (82%) Query: 30 SLVAALFGVPATLAHASEMSDINKLMRAGQYADALTKTDAVLAKHPRDAQLRFTKGLILA 89 +L+ +L G+ A A E+SD+++L+RAGQ+ AL K DA L ++PRDAQ+RF KG+IL Sbjct: 20 ALILSLAGLCAFPVMADELSDVSQLLRAGQHGAALAKADAFLNRNPRDAQMRFLKGVILT 79 Query: 90 EQNRSAEAIAVFSKLTEDFPDLPEPYNNLAVLYAADGQYDKARAALDMAMRTNPTYATAL 149 EQN+SAEAI +FSKLT+D+P LPEPYNNLAVLYA+ GQY+KAR ALDMA+RTNPTYATA Sbjct: 80 EQNKSAEAITIFSKLTDDYPTLPEPYNNLAVLYASSGQYEKARTALDMAIRTNPTYATAY 139 Query: 150 ENLGDVYAKLASQAYDKALQIDPGANVPQPKLTLLRSLNGNTTGGT 195 ENLGDV+AKLASQAYDKALQ+D + KLT++R+L GNT+GGT Sbjct: 140 ENLGDVHAKLASQAYDKALQLDNSNVGAKSKLTMVRTLVGNTSGGT 185 Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats. Identities = 81/158 (51%), Positives = 106/158 (67%) Query: 367 AAEKAKAEKLAAAEKAKAEKLAAAEKAKADKARADKEKAKAEASAEQDKAVVLAALNGWA 426 A KA+A+ AE K A + K + + KAKA A+ ++ V+ A+N WA Sbjct: 222 AEVKAEAKPEIKAEVKADPKAAQKQAQKLEAEAKREAKAKAHAAEAAERDQVMNAVNAWA 281 Query: 427 KAWSDKDVRSYLGHYASDFETPRGASRKEWAEERRARIEDKGRISVKVSNATVSINGNIA 486 KAWS +DV++YL YA+DF+ P G SRK W +ERRARIEDK RISVK+ VS+NGN A Sbjct: 282 KAWSARDVKAYLNAYANDFDLPAGQSRKTWTDERRARIEDKARISVKIETPQVSLNGNTA 341 Query: 487 TVRYRQIYNSDRLTVDSRKTLIFVKQGNRWLIKQERSG 524 TV++RQIY+SDR +SRKTL+ VKQ +W IKQER+G Sbjct: 342 TVKFRQIYDSDRTKANSRKTLVMVKQSGKWHIKQERAG 379 >gb|EGW61531.1| Tetratricopeptide TPR_1 repeat-containing protein [Dechlorosoma suillum PS] Length = 387 Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats. Identities = 100/164 (60%), Positives = 125/164 (76%), Gaps = 3/164 (1%) Query: 31 LVAALFGVPA---TLAHASEMSDINKLMRAGQYADALTKTDAVLAKHPRDAQLRFTKGLI 87 L+ AL G+ + +LA ++DI K++R GQ A AL K DA +A P+DAQ RF +G+I Sbjct: 25 LIGALIGLGSANISLAADVAITDIQKMVRQGQNAQALEKVDAYIATRPKDAQGRFLRGII 84 Query: 88 LAEQNRSAEAIAVFSKLTEDFPDLPEPYNNLAVLYAADGQYDKARAALDMAMRTNPTYAT 147 L E NR+ EAIAVF+KLTEDFP+LPEPYNNLAVLYA QYDKAR AL+MA+RT+P+YA Sbjct: 85 LTELNRNNEAIAVFTKLTEDFPELPEPYNNLAVLYAQQKQYDKARTALEMAIRTHPSYAV 144 Query: 148 ALENLGDVYAKLASQAYDKALQIDPGANVPQPKLTLLRSLNGNT 191 A ENLGDVYAKLASQAYDKALQ+D Q KL+L+R + G++ Sbjct: 145 AHENLGDVYAKLASQAYDKALQLDSSNAHAQSKLSLIREMIGSS 188 Score = 87.8 bits (216), Expect = 4e-15, Method: Composition-based stats. Identities = 51/111 (45%), Positives = 71/111 (63%), Gaps = 1/111 (0%) Query: 414 DKAVVLAALNGWAKAWSDKDVRSYLGHYASDFETPRGASRKEWAEERRARIEDKGRISVK 473 D+ V A+ WA AWS KDV+ YL YA DF+ P G +RK W +ER +RI+ G++ V Sbjct: 277 DEGAVTKAVQNWAAAWSRKDVKGYLSFYAPDFQAP-GGNRKAWEKERASRIDKPGKLQVS 335 Query: 474 VSNATVSINGNIATVRYRQIYNSDRLTVDSRKTLIFVKQGNRWLIKQERSG 524 V + VS NG+ ATVR++Q Y S L + KTL+ + G +WLI+QE+ G Sbjct: 336 VEDIKVSQNGDKATVRFKQNYTSATLKSSAAKTLVLQRSGGKWLIQQEKVG 386