BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2283.p (198 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775284.1| peptidyl-prolyl cis/trans isomerase [Herbasp... 342 3e-92 ref|YP_001353799.1| peptidyl-prolyl cis-trans isomerase B [Janth... 261 3e-68 ref|YP_001099584.1| peptidyl-prolyl cis-trans isomerase B [Hermi... 254 3e-66 ref|ZP_08274351.1| Peptidyl-prolyl cis-trans isomerase ppiA prec... 240 8e-62 ref|YP_004752991.1| peptidyl-prolyl cis-trans isomerase B -like ... 228 5e-58 >ref|YP_003775284.1| peptidyl-prolyl cis/trans isomerase [Herbaspirillum seropedicae SmR1] gb|ADJ63376.1| peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family protein [Herbaspirillum seropedicae SmR1] Length = 189 Score = 342 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 172/189 (91%), Positives = 182/189 (96%) Query: 10 MILSRRHLLRMAAAFSLSATLAAPALAADAPRVLLKTSMGNITLELNPEKAPVSVDNFLK 69 MILSRRHLLRMAAA SLS LA PALAADAPRVLLKTSMG+IT+ELNPEKAPVSV+NFLK Sbjct: 1 MILSRRHLLRMAAALSLSTALAVPALAADAPRVLLKTSMGDITVELNPEKAPVSVENFLK 60 Query: 70 YVKKGQYNGTVFHRVINGFMIQGGGYDQNMREKATDAPIKNEANNGLKNEVYTVAMARTS 129 YVKKGQYNGTVFHRVINGFMIQGGG DQN+REK TDAPIKNEANNGLKNEVYT+AMARTS Sbjct: 61 YVKKGQYNGTVFHRVINGFMIQGGGMDQNLREKPTDAPIKNEANNGLKNEVYTIAMARTS 120 Query: 130 APHSATAQFFINVADNRFLNYPGQDGWGYAVFGKVIAGADVVDKIKQVRTGAGDVPATPV 189 APHSATAQFFINVA+NRFL+YPGQDGWGYAVFGKV+AG +VVDKIKQVRTGAGDVP+TPV Sbjct: 121 APHSATAQFFINVANNRFLDYPGQDGWGYAVFGKVVAGTEVVDKIKQVRTGAGDVPSTPV 180 Query: 190 VIESATLVK 198 VIESATLVK Sbjct: 181 VIESATLVK 189 >ref|YP_001353799.1| peptidyl-prolyl cis-trans isomerase B [Janthinobacterium sp. Marseille] gb|ABR89894.1| peptidyl-prolyl cis-trans isomerase B [Janthinobacterium sp. Marseille] Length = 192 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 136/192 (70%), Positives = 159/192 (82%), Gaps = 5/192 (2%) Query: 10 MILSRRHLLRMAAAFSLSATLAAPALAADAPRVLLKTSMGNITLELNPEKAPVSVDNFLK 69 M SRR L M AA SLS L A AADAP+VLLKTSMG+I LELN EKAP SV+NF++ Sbjct: 1 MKFSRRQALAMVAAVSLSGMLQL-AQAADAPQVLLKTSMGDIVLELNQEKAPKSVENFVQ 59 Query: 70 YVKKGQYNGTVFHRVINGFMIQGGGYDQNMREKATDAPIKNEANNGLKNEVYTVAMARTS 129 YVK GQYNGT+FHRVI+GFMIQGGG+D++M+EKAT API+NEA NGLKN++YT+AMARTS Sbjct: 60 YVKSGQYNGTIFHRVIDGFMIQGGGFDKDMKEKATRAPIQNEAANGLKNDIYTIAMARTS 119 Query: 130 APHSATAQFFINVADNRFLNYPGQDGWGYAVFGKVIAGADVVDKIKQV----RTGAGDVP 185 APHSATAQFFIN A+N LNYP +DGWGYAVFGKVI G++VVDKIK V R G +VP Sbjct: 120 APHSATAQFFINTANNSMLNYPSRDGWGYAVFGKVIKGSEVVDKIKNVSTGNRGGHQNVP 179 Query: 186 ATPVVIESATLV 197 TPV+IESAT++ Sbjct: 180 TTPVIIESATVI 191 >ref|YP_001099584.1| peptidyl-prolyl cis-trans isomerase B [Herminiimonas arsenicoxydans] emb|CAL61457.1| peptidyl-prolyl cis-trans isomerase B (PPIase B) (rotamase B) [Herminiimonas arsenicoxydans] Length = 192 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 131/193 (67%), Positives = 152/193 (78%), Gaps = 5/193 (2%) Query: 10 MILSRRHLLRMAAAFSLSATLAAPALAADAPRVLLKTSMGNITLELNPEKAPVSVDNFLK 69 M SRR L +A A SLS TL A A DAPRVLLKT+MG+I LELN +KAP +VDNFL+ Sbjct: 1 MKFSRRRALSIAFALSLSGTLQL-AHATDAPRVLLKTNMGDIVLELNQDKAPKTVDNFLQ 59 Query: 70 YVKKGQYNGTVFHRVINGFMIQGGGYDQNMREKATDAPIKNEANNGLKNEVYTVAMARTS 129 YVK GQYNGT+FHRVI FMIQGGG+D++MREK T API+NEA NGLKN++YT+AMART Sbjct: 60 YVKSGQYNGTIFHRVIADFMIQGGGFDKDMREKVTRAPIQNEAQNGLKNDIYTIAMARTG 119 Query: 130 APHSATAQFFINVADNRFLNYPGQDGWGYAVFGKVIAGADVVDKIKQVRTGA----GDVP 185 PHSATAQFFIN N LNYPGQDGWGY VFGKV+ G +VV+KIKQV TG +VP Sbjct: 120 NPHSATAQFFINTQTNNMLNYPGQDGWGYTVFGKVVKGTEVVNKIKQVNTGNRGPHQNVP 179 Query: 186 ATPVVIESATLVK 198 A PV+IESAT+ + Sbjct: 180 AQPVIIESATITQ 192 >ref|ZP_08274351.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Oxalobacteraceae bacterium IMCC9480] gb|EGF32174.1| Peptidyl-prolyl cis-trans isomerase ppiA precursor [Oxalobacteraceae bacterium IMCC9480] Length = 192 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 130/191 (68%), Positives = 150/191 (78%), Gaps = 7/191 (3%) Query: 13 SRRHLLRMAAAFSLSA-TLAAPALAADAPRVLLKTSMGNITLELNPEKAPVSVDNFLKYV 71 +RR L + A L A TL A A A+APRV+LKTSMG+I LELN EKAP SVDNFLKYV Sbjct: 4 TRRQLTGLIVALVLGAGTLTAHA--AEAPRVVLKTSMGDIVLELNAEKAPASVDNFLKYV 61 Query: 72 KKGQYNGTVFHRVINGFMIQGGGYDQNMREKATDAPIKNEANNGLKNEVYTVAMARTSAP 131 K G Y GT+FHRVI+GFMIQGGG+D+NM +K T APIKNE +NGLKNE YTVAMART P Sbjct: 62 KNGHYKGTIFHRVIDGFMIQGGGFDKNMNQKQTSAPIKNEGSNGLKNEAYTVAMARTGDP 121 Query: 132 HSATAQFFINVADNRFLNYPGQDGWGYAVFGKVIAGADVVDKIKQVRTGAG----DVPAT 187 SATAQFFINV +N L+YPG+DG+GYAVFGKV+AG DVVDKI++V T +VP T Sbjct: 122 DSATAQFFINVNNNGMLDYPGRDGYGYAVFGKVVAGQDVVDKIRRVPTKDAAMYQNVPQT 181 Query: 188 PVVIESATLVK 198 P+VIESATL K Sbjct: 182 PIVIESATLAK 192 >ref|YP_004752991.1| peptidyl-prolyl cis-trans isomerase B -like protein [Collimonas fungivorans Ter331] gb|AEK62168.1| peptidyl-prolyl cis-trans isomerase B (rotamase B)-like protein [Collimonas fungivorans Ter331] Length = 196 Score = 228 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 117/190 (61%), Positives = 142/190 (74%), Gaps = 3/190 (1%) Query: 12 LSRRHL-LRMAAAFSLSATLAAPALA--ADAPRVLLKTSMGNITLELNPEKAPVSVDNFL 68 LSRR L + +A + + L P++A AD P VLLKT+MG+I +ELNPEKAP +V NFL Sbjct: 7 LSRRAFTLALTSALTAACLLGNPSIASAADKPHVLLKTNMGDIVIELNPEKAPKTVKNFL 66 Query: 69 KYVKKGQYNGTVFHRVINGFMIQGGGYDQNMREKATDAPIKNEANNGLKNEVYTVAMART 128 YV G YNGT+FHRVI FMIQGGG ++M EK ++NEA NGLKN Y+VAMART Sbjct: 67 GYVNSGHYNGTIFHRVIENFMIQGGGMTKDMVEKPAPNKVENEAKNGLKNVPYSVAMART 126 Query: 129 SAPHSATAQFFINVADNRFLNYPGQDGWGYAVFGKVIAGADVVDKIKQVRTGAGDVPATP 188 + P SA AQFFIN +N FLNYPG+DGWGYAVFG+VI G DVVDKIK+V+T DVP TP Sbjct: 127 ADPQSAGAQFFINTTNNEFLNYPGRDGWGYAVFGQVIKGMDVVDKIKKVKTAYQDVPTTP 186 Query: 189 VVIESATLVK 198 V+I+SAT+ K Sbjct: 187 VIIQSATVTK 196