BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2274.p         (116 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775275.1| Zn-dependent protease [Herbaspirillum serope...   222   1e-56
ref|YP_003753071.1| peptidase, for maturation of Microcin B17 an...   197   3e-49
emb|CCA85859.1| peptidase, for maturation of Microcin B17 and de...   197   4e-49
emb|CBJ38110.1| peptidase, for maturation of Microcin B17 and de...   197   5e-49
ref|NP_519066.1| PMBA protein (tlde protein) [Ralstonia solanace...   197   5e-49

>ref|YP_003775275.1| Zn-dependent protease [Herbaspirillum seropedicae SmR1]
 gb|ADJ63367.1| Zn-dependent protease protein [Herbaspirillum seropedicae SmR1]
          Length = 454

 Score =  222 bits (566), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 113/116 (97%), Positives = 116/116 (100%)

Query: 1   MQTTGNSGGSHNLTLRSDLTTKADTFKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASG 60
           MQTTGNSGGSHNLTLRS+LTT+ADTFKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASG
Sbjct: 339 MQTTGNSGGSHNLTLRSELTTRADTFKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASG 398

Query: 61  YWVENGVIQYPVEEITIAGNMKDMLRQIVAVGNDTLIRGTKETGSILLENMTIAGD 116
           YWVENGVIQYPVEEITIAGNMKDMLRQIVAVGNDTLIRGTKETGSILLE+MTIAGD
Sbjct: 399 YWVENGVIQYPVEEITIAGNMKDMLRQIVAVGNDTLIRGTKETGSILLESMTIAGD 454


>ref|YP_003753071.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
           [Ralstonia solanacearum PSI07]
 emb|CBJ51804.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
           [Ralstonia solanacearum PSI07]
 emb|CCA83123.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
           [blood disease bacterium R229]
          Length = 457

 Score =  197 bits (502), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 96/116 (82%), Positives = 105/116 (90%)

Query: 1   MQTTGNSGGSHNLTLRSDLTTKADTFKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASG 60
           MQTTGN+GGSHNLTL SD T   D F GML++MGTGLLVTELMGQGVNYVTGDYSRGASG
Sbjct: 342 MQTTGNAGGSHNLTLFSDRTQPGDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASG 401

Query: 61  YWVENGVIQYPVEEITIAGNMKDMLRQIVAVGNDTLIRGTKETGSILLENMTIAGD 116
           YWVENGVIQYPVEEITIAGN++DM RQIVA+G D L+RGTKETGSIL+E MTIAG+
Sbjct: 402 YWVENGVIQYPVEEITIAGNLRDMFRQIVAIGADALVRGTKETGSILIEQMTIAGE 457


>emb|CCA85859.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
           [Ralstonia syzygii R24]
          Length = 457

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 96/116 (82%), Positives = 105/116 (90%)

Query: 1   MQTTGNSGGSHNLTLRSDLTTKADTFKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASG 60
           MQTTGN+GGSHNLTL SD T   D F GML++MGTGLLVTELMGQGVNYVTGDYSRGASG
Sbjct: 342 MQTTGNAGGSHNLTLFSDRTQPGDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASG 401

Query: 61  YWVENGVIQYPVEEITIAGNMKDMLRQIVAVGNDTLIRGTKETGSILLENMTIAGD 116
           YWVENGVIQYPVEEITIAGN++DM RQIVA+G D L+RGTKETGSIL+E MTIAG+
Sbjct: 402 YWVENGVIQYPVEEITIAGNLRDMFRQIVAIGADALVRGTKETGSILIEQMTIAGE 457


>emb|CBJ38110.1| peptidase, for maturation of Microcin B17 and degradation of CcdA
           [Ralstonia solanacearum CMR15]
          Length = 457

 Score =  197 bits (501), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 97/116 (83%), Positives = 105/116 (90%)

Query: 1   MQTTGNSGGSHNLTLRSDLTTKADTFKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASG 60
           MQTTGN+GGSHNLTL SD T   D F GML++MGTGLLVTELMGQGVNYVTGDYSRGASG
Sbjct: 342 MQTTGNAGGSHNLTLFSDQTQPGDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASG 401

Query: 61  YWVENGVIQYPVEEITIAGNMKDMLRQIVAVGNDTLIRGTKETGSILLENMTIAGD 116
           YWVENGVIQYPVEEITIAGN++DM RQIVA+G D LIRGTKETGSIL+E MTIAG+
Sbjct: 402 YWVENGVIQYPVEEITIAGNLRDMFRQIVAIGADALIRGTKETGSILIEQMTIAGE 457


>ref|NP_519066.1| PMBA protein (tlde protein) [Ralstonia solanacearum GMI1000]
 emb|CAD14647.1| putative pmba protein (tlde protein) [Ralstonia solanacearum
           GMI1000]
          Length = 457

 Score =  197 bits (500), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 97/116 (83%), Positives = 105/116 (90%)

Query: 1   MQTTGNSGGSHNLTLRSDLTTKADTFKGMLKKMGTGLLVTELMGQGVNYVTGDYSRGASG 60
           MQTTGN+GGSHNLTL SD T   D F GML++MGTGLLVTELMGQGVNYVTGDYSRGASG
Sbjct: 342 MQTTGNAGGSHNLTLFSDRTQPGDDFAGMLRRMGTGLLVTELMGQGVNYVTGDYSRGASG 401

Query: 61  YWVENGVIQYPVEEITIAGNMKDMLRQIVAVGNDTLIRGTKETGSILLENMTIAGD 116
           YWVENGVIQYPVEEITIAGN++DM RQIVA+G D LIRGTKETGSIL+E MTIAG+
Sbjct: 402 YWVENGVIQYPVEEITIAGNLRDMFRQIVAIGADALIRGTKETGSILIEQMTIAGE 457