BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2273.p         (233 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775275.1| Zn-dependent protease [Herbaspirillum serope...   410   e-112
ref|YP_004753603.1| PmbA protein [Collimonas fungivorans Ter331]...   336   1e-90
ref|YP_001099308.1| hypothetical protein HEAR0999 [Herminiimonas...   330   1e-88
ref|YP_001352824.1| PmbA protein [Janthinobacterium sp. Marseill...   327   8e-88
ref|ZP_08276083.1| TldE/PmbA protein [Oxalobacteraceae bacterium...   289   2e-76

>ref|YP_003775275.1| Zn-dependent protease [Herbaspirillum seropedicae SmR1]
 gb|ADJ63367.1| Zn-dependent protease protein [Herbaspirillum seropedicae SmR1]
          Length = 454

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 206/220 (93%), Positives = 211/220 (95%)

Query: 1   MSDTPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDK 60
           MSDTPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDK
Sbjct: 1   MSDTPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDK 60

Query: 61  GIGVTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFTAIDDCAGLPDAEMLEMS 120
           GIGVTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFT+IDDCAGLPDAEMLEM+
Sbjct: 61  GIGVTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFTSIDDCAGLPDAEMLEMA 120

Query: 121 PRDLKLFSPWNISAEEAVALAQRCETAALETDPRITNSEGAGVYVQHSHFIAANSRGFMG 180
           PRDLKLFSPWNISAEEAVALAQRCETAALETDPRI+NSEGAGVYVQHSHFIAANSRGFMG
Sbjct: 121 PRDLKLFSPWNISAEEAVALAQRCETAALETDPRISNSEGAGVYVQHSHFIAANSRGFMG 180

Query: 181 GYPFSRHTISVAPIAGKGAGMQRDDWYSPNAILRSLPSPK 220
           GYPFSRHTISVAPIAGKGA MQRDDWYS     + L  P+
Sbjct: 181 GYPFSRHTISVAPIAGKGASMQRDDWYSSKRDPKKLAQPE 220


>ref|YP_004753603.1| PmbA protein [Collimonas fungivorans Ter331]
 gb|AEK62780.1| PmbA protein [Collimonas fungivorans Ter331]
          Length = 454

 Score =  336 bits (862), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 169/220 (76%), Positives = 187/220 (85%)

Query: 1   MSDTPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDK 60
           MSD+ F HSQ+QL+QLAQDVLRYAR+KGAS AAV+ISEGSGLSV VRKG +ETIEQNKDK
Sbjct: 1   MSDSVFIHSQEQLQQLAQDVLRYAREKGASGAAVEISEGSGLSVGVRKGSVETIEQNKDK 60

Query: 61  GIGVTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFTAIDDCAGLPDAEMLEMS 120
           G+GVTV+LGE R  RRGNASTSDFS +AL++TVEAAYNIARFTA DDCAGLPD + LEM+
Sbjct: 61  GMGVTVYLGEERHTRRGNASTSDFSAKALQDTVEAAYNIARFTAEDDCAGLPDVDTLEMN 120

Query: 121 PRDLKLFSPWNISAEEAVALAQRCETAALETDPRITNSEGAGVYVQHSHFIAANSRGFMG 180
           P DLKL SPW ISAEEAV LA+RCE AA   D RITNSEGAGVY Q SHF++ANSRGFMG
Sbjct: 121 PLDLKLCSPWLISAEEAVELAKRCEAAAFAVDKRITNSEGAGVYAQQSHFVSANSRGFMG 180

Query: 181 GYPFSRHTISVAPIAGKGAGMQRDDWYSPNAILRSLPSPK 220
           GYPFSRHTISVAPIAGKG  MQRDDWYS     + L  P+
Sbjct: 181 GYPFSRHTISVAPIAGKGGNMQRDDWYSSMRDAKQLAKPE 220


>ref|YP_001099308.1| hypothetical protein HEAR0999 [Herminiimonas arsenicoxydans]
 emb|CAL61181.1| Protein pmbA (Protein tldE) [Herminiimonas arsenicoxydans]
          Length = 454

 Score =  330 bits (846), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 164/208 (78%), Positives = 185/208 (88%)

Query: 1   MSDTPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDK 60
           MSD+ F HSQDQLKQLAQDVLRYA++KGAS+AAV+ISEGSGLSV+VRKG +ETIEQNKDK
Sbjct: 1   MSDSVFIHSQDQLKQLAQDVLRYAKEKGASNAAVEISEGSGLSVSVRKGGVETIEQNKDK 60

Query: 61  GIGVTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFTAIDDCAGLPDAEMLEMS 120
           G+GVTV+LGE R +RRGNASTSDFSQ+ALK+TVEAAYNIARFTA DDCAGLPD +MLE +
Sbjct: 61  GMGVTVYLGEERHIRRGNASTSDFSQKALKDTVEAAYNIARFTAEDDCAGLPDEDMLERN 120

Query: 121 PRDLKLFSPWNISAEEAVALAQRCETAALETDPRITNSEGAGVYVQHSHFIAANSRGFMG 180
           PRDL+L  PW IS EEAV LA+R E AA   D RITNSEGA VY Q SHF++ANSRGF+G
Sbjct: 121 PRDLQLCYPWLISTEEAVELAKRGEAAAFAVDKRITNSEGASVYAQQSHFVSANSRGFIG 180

Query: 181 GYPFSRHTISVAPIAGKGAGMQRDDWYS 208
           GYP+SRHTISVAPIAGKG+ MQRDDWYS
Sbjct: 181 GYPYSRHTISVAPIAGKGSNMQRDDWYS 208


>ref|YP_001352824.1| PmbA protein [Janthinobacterium sp. Marseille]
 gb|ABR89463.1| PmbA protein [Janthinobacterium sp. Marseille]
          Length = 454

 Score =  327 bits (838), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 163/220 (74%), Positives = 189/220 (85%)

Query: 1   MSDTPFTHSQDQLKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDK 60
           MS++ F HSQDQLKQLAQDVLRYA++KGASDAAV+I+EGSGLSV+VRKG +ETIEQNKDK
Sbjct: 1   MSESVFIHSQDQLKQLAQDVLRYAKEKGASDAAVEINEGSGLSVSVRKGGVETIEQNKDK 60

Query: 61  GIGVTVFLGEGRQVRRGNASTSDFSQQALKETVEAAYNIARFTAIDDCAGLPDAEMLEMS 120
           G+GVTV+LG    VRRGNASTSDFSQQALK+TVEAAYNIARFTA DDCAGLP+ +MLE++
Sbjct: 61  GMGVTVYLGGDGHVRRGNASTSDFSQQALKDTVEAAYNIARFTAEDDCAGLPEVDMLELN 120

Query: 121 PRDLKLFSPWNISAEEAVALAQRCETAALETDPRITNSEGAGVYVQHSHFIAANSRGFMG 180
           PRDL+L  PW IS+EEAV LA+R E AA   D RITNSEGA +Y Q SHF++ANSRGF+G
Sbjct: 121 PRDLQLCYPWLISSEEAVELAKRGEAAAFAVDKRITNSEGASIYAQQSHFVSANSRGFIG 180

Query: 181 GYPFSRHTISVAPIAGKGAGMQRDDWYSPNAILRSLPSPK 220
           GYP+SRHTISVAPIAGKG+ MQRDDWYS     + L  P+
Sbjct: 181 GYPYSRHTISVAPIAGKGSNMQRDDWYSSMRDPKKLAKPE 220


>ref|ZP_08276083.1| TldE/PmbA protein [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30445.1| TldE/PmbA protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 442

 Score =  289 bits (739), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 142/208 (68%), Positives = 170/208 (81%)

Query: 13  LKQLAQDVLRYARDKGASDAAVDISEGSGLSVAVRKGKIETIEQNKDKGIGVTVFLGEGR 72
           ++QL QDVLRYAR +GASDA+V+++EG GLSV VRKG++ETIEQNKDKG+ VT++LG   
Sbjct: 1   MQQLTQDVLRYARQRGASDASVEVNEGQGLSVTVRKGRVETIEQNKDKGVSVTLYLGSEG 60

Query: 73  QVRRGNASTSDFSQQALKETVEAAYNIARFTAIDDCAGLPDAEMLEMSPRDLKLFSPWNI 132
            +R GNA TSDFSQQALK TVEAA+NIARFTA D+CAGLPD +  E +P DL+L+  W+I
Sbjct: 61  HMRSGNADTSDFSQQALKATVEAAWNIARFTAEDNCAGLPDPDQYEKNPPDLQLYHHWDI 120

Query: 133 SAEEAVALAQRCETAALETDPRITNSEGAGVYVQHSHFIAANSRGFMGGYPFSRHTISVA 192
            A +AVALAQRCE AA   DPR+TNSEGAGVY QHS F+ ANSRGFMGGY FSRHT+SV+
Sbjct: 121 DAAQAVALAQRCEAAAFAVDPRVTNSEGAGVYAQHSQFMMANSRGFMGGYAFSRHTLSVS 180

Query: 193 PIAGKGAGMQRDDWYSPNAILRSLPSPK 220
           PIAG+G GMQRDDWYS     + L SP+
Sbjct: 181 PIAGRGNGMQRDDWYSSQRDPQRLASPE 208