BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2254.p (280 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775265.1| D-aminopeptidase [Herbaspirillum seropedicae... 505 e-141 ref|YP_004751250.1| D-aminopeptidase [Collimonas fungivorans Ter... 353 1e-95 ref|ZP_07676885.1| D-aminopeptidase [Ralstonia sp. 5_7_47FAA] >g... 330 1e-88 ref|YP_001898833.1| peptidase M55 D-aminopeptidase [Ralstonia pi... 330 2e-88 ref|YP_002981284.1| peptidase M55 D-aminopeptidase [Ralstonia pi... 329 3e-88 >ref|YP_003775265.1| D-aminopeptidase [Herbaspirillum seropedicae SmR1] gb|ADJ63357.1| D-aminopeptidase protein [Herbaspirillum seropedicae SmR1] Length = 280 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 258/280 (92%), Positives = 265/280 (94%) Query: 1 MNKRANILVSVDIEGVAGVFHTEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKV 60 M+KRANILVSVDIEGVAGVFH EQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKV Sbjct: 1 MSKRANILVSVDIEGVAGVFHPEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKV 60 Query: 61 NDSHGGFRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHT 120 NDSHGGFRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHT Sbjct: 61 NDSHGGFRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHT 120 Query: 121 TNSFAFARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAIFAETKK 180 TNSFAFARVWL GQE+GEAGLYGALAAEHG PVIFGSGDDAFIEENQPLF HA+FAETKK Sbjct: 121 TNSFAFARVWLDGQEMGEAGLYGALAAEHGAPVIFGSGDDAFIEENQPLFAHAVFAETKK 180 Query: 181 AYGANSGDSLTPQQSCVLLEERARQAVTALVANPAAMPVLPLRGPLRCRLQAQTVALTDL 240 AYGANSGDSLTPQQSC LLE RA+QAV +A+P MP PLRGPLRCRLQAQTVAL DL Sbjct: 181 AYGANSGDSLTPQQSCTLLEARAQQAVATWLADPQTMPARPLRGPLRCRLQAQTVALADL 240 Query: 241 FSQLPILERTDNVTVEFDAPTAEYAVRVLNSLSAMSAMLR 280 FSQLPILER DNV+VEFDAPTAEYAVRVLNSLSAMSAMLR Sbjct: 241 FSQLPILERCDNVSVEFDAPTAEYAVRVLNSLSAMSAMLR 280 >ref|YP_004751250.1| D-aminopeptidase [Collimonas fungivorans Ter331] gb|AEK60427.1| D-aminopeptidase [Collimonas fungivorans Ter331] Length = 272 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 192/274 (70%), Positives = 214/274 (78%), Gaps = 4/274 (1%) Query: 7 ILVSVDIEGVAGVFHTEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHGG 66 IL+SVDIEGVAGVFH EQTRAGN EYERARR MT EANAVI GALA GA+ I VNDSHGG Sbjct: 3 ILISVDIEGVAGVFHPEQTRAGNPEYERARRLMTAEANAVIEGALAGGASQILVNDSHGG 62 Query: 67 FRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFAF 126 FRNLLPDLLHP A +LGKPR+LGMM GVD + VM+VGYH R+Q RGILAHT NSFAF Sbjct: 63 FRNLLPDLLHPAACAILGKPRLLGMMSGVDSGVAGVMMVGYHGRSQSRGILAHTINSFAF 122 Query: 127 ARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAIFAETKKAYGANS 186 ARVWL GQELGEAG+YGALA E GVPVIFGSGDD F+EEN+PLFP A K A G+NS Sbjct: 123 ARVWLNGQELGEAGIYGALAGEFGVPVIFGSGDDVFVEENRPLFPQATLVSVKTADGSNS 182 Query: 187 GDSLTPQQSCVLLEERARQAVTALVANPAAMPVLPLRGPLRCRLQAQTVALTDLFSQLPI 246 G SL+PQ+S LL E A+ A+ L A A VLP + CRLQ Q+ AL DLF QLP+ Sbjct: 183 GASLSPQRSLSLLSEGAKAALANLPA--ALPFVLP--PAITCRLQIQSPALADLFCQLPL 238 Query: 247 LERTDNVTVEFDAPTAEYAVRVLNSLSAMSAMLR 280 L+R D V VEF AP+ +YAVR+LNSLSAMS MLR Sbjct: 239 LQRIDGVNVEFTAPSVQYAVRILNSLSAMSFMLR 272 >ref|ZP_07676885.1| D-aminopeptidase [Ralstonia sp. 5_7_47FAA] gb|EFP64888.1| D-aminopeptidase [Ralstonia sp. 5_7_47FAA] Length = 271 Score = 330 bits (846), Expect = 1e-88, Method: Composition-based stats. Identities = 175/274 (63%), Positives = 198/274 (72%), Gaps = 5/274 (1%) Query: 7 ILVSVDIEGVAGVFHTEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHGG 66 IL+S DIEGVA VFH EQTRAGNGEYERARRWMT EA+A +RGA GAT + VNDSHGG Sbjct: 3 ILISADIEGVANVFHPEQTRAGNGEYERARRWMTAEADAAVRGAFDGGATDVLVNDSHGG 62 Query: 67 FRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFAF 126 FRNL+PD + +AR VLGKPR L MM GVD DAV ++GYH+RA RG+LAHT NSFAF Sbjct: 63 FRNLIPDSIDRRARFVLGKPRYLSMMAGVD-GCDAVCMIGYHARAGSRGVLAHTINSFAF 121 Query: 127 ARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAIFAETKKAYGANS 186 ARVW QELGEAGLYGALA E GVPV SGDD FI+E +PL PH F ETK+A G N+ Sbjct: 122 ARVWFNEQELGEAGLYGALAGERGVPVAVASGDDVFIKETKPLLPHTTFVETKQAEGQNA 181 Query: 187 GDSLTPQQSCVLLEERARQAVTALVANPAAMPVLPLRGPLRCRLQAQTVALTDLFSQLPI 246 G SL+P+QSC E AV A V L L+ P+ CRLQ QT AL DLF Q P Sbjct: 182 GTSLSPEQSC----EAIYAAVKATVRRGHFSMPLRLQAPIVCRLQTQTPALADLFCQWPA 237 Query: 247 LERTDNVTVEFDAPTAEYAVRVLNSLSAMSAMLR 280 LER D + F A + E+AVR+LNSLSAMSAMLR Sbjct: 238 LERVDGTMLRFAADSVEHAVRMLNSLSAMSAMLR 271 >ref|YP_001898833.1| peptidase M55 D-aminopeptidase [Ralstonia pickettii 12J] gb|ACD26401.1| peptidase M55 D-aminopeptidase [Ralstonia pickettii 12J] Length = 271 Score = 330 bits (846), Expect = 2e-88, Method: Composition-based stats. Identities = 175/274 (63%), Positives = 198/274 (72%), Gaps = 5/274 (1%) Query: 7 ILVSVDIEGVAGVFHTEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHGG 66 IL+S DIEGVA VFH EQTRAGNGEYERARRWMT EA+A +RGA GAT + VNDSHGG Sbjct: 3 ILISADIEGVANVFHPEQTRAGNGEYERARRWMTAEADAAVRGAFDGGATDVLVNDSHGG 62 Query: 67 FRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFAF 126 FRNL+PD + +AR VLGKPR L MM GVD DAV ++GYH+RA RG+LAHT NSFAF Sbjct: 63 FRNLIPDSIDRRARFVLGKPRYLSMMAGVD-GCDAVCMIGYHARAGSRGVLAHTINSFAF 121 Query: 127 ARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAIFAETKKAYGANS 186 ARVW QELGEAGLYGALA E GVPV SGDD FI+E +PL PH F ETK+A G N+ Sbjct: 122 ARVWFNEQELGEAGLYGALAGERGVPVAVASGDDVFIKETKPLLPHTTFVETKQAEGHNA 181 Query: 187 GDSLTPQQSCVLLEERARQAVTALVANPAAMPVLPLRGPLRCRLQAQTVALTDLFSQLPI 246 G SL+P+QSC E AV A V L L+ P+ CRLQ QT AL DLF Q P Sbjct: 182 GTSLSPEQSC----EAIYAAVKATVQRGHFSMPLRLQAPIVCRLQTQTPALADLFCQWPA 237 Query: 247 LERTDNVTVEFDAPTAEYAVRVLNSLSAMSAMLR 280 LER D + F A + E+AVR+LNSLSAMSAMLR Sbjct: 238 LERVDGTMLRFAADSVEHAVRMLNSLSAMSAMLR 271 >ref|YP_002981284.1| peptidase M55 D-aminopeptidase [Ralstonia pickettii 12D] gb|ACS62612.1| peptidase M55 D-aminopeptidase [Ralstonia pickettii 12D] Length = 271 Score = 329 bits (843), Expect = 3e-88, Method: Composition-based stats. Identities = 174/274 (63%), Positives = 198/274 (72%), Gaps = 5/274 (1%) Query: 7 ILVSVDIEGVAGVFHTEQTRAGNGEYERARRWMTEEANAVIRGALAAGATAIKVNDSHGG 66 IL+S DIEGVA VFH EQTRAGNGEYERARRWMT EA+A +RGA GAT + VNDSHGG Sbjct: 3 ILISADIEGVANVFHPEQTRAGNGEYERARRWMTAEADAAVRGAFDGGATDVLVNDSHGG 62 Query: 67 FRNLLPDLLHPQARMVLGKPRVLGMMGGVDHDIDAVMLVGYHSRAQGRGILAHTTNSFAF 126 FRNL+PD + +AR VLGKPR L MM G+D DAV ++GYH+RA RG+LAHT NSFAF Sbjct: 63 FRNLIPDSIDRRARFVLGKPRYLSMMAGMD-GCDAVCMIGYHARAGSRGVLAHTINSFAF 121 Query: 127 ARVWLGGQELGEAGLYGALAAEHGVPVIFGSGDDAFIEENQPLFPHAIFAETKKAYGANS 186 ARVW QELGEAGLYGALA E GVPV SGDD FI+E +PL PH F ETK+A G N+ Sbjct: 122 ARVWFNEQELGEAGLYGALAGERGVPVAVASGDDVFIKETKPLLPHTTFVETKQAEGQNA 181 Query: 187 GDSLTPQQSCVLLEERARQAVTALVANPAAMPVLPLRGPLRCRLQAQTVALTDLFSQLPI 246 G SL+P+QSC E AV A V L L+ P+ CRLQ QT AL DLF Q P Sbjct: 182 GTSLSPEQSC----EAIYAAVKATVRRGHFSMPLRLQAPIVCRLQTQTPALADLFCQWPA 237 Query: 247 LERTDNVTVEFDAPTAEYAVRVLNSLSAMSAMLR 280 LER D + F A + E+AVR+LNSLSAMSAMLR Sbjct: 238 LERVDGTVLRFAADSVEHAVRMLNSLSAMSAMLR 271