BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2250.p (333 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775262.1| dipeptide/oligopeptide/nickel ABC transporte... 521 e-146 ref|ZP_07676888.1| glutathione ABC transporter, permease protein... 507 e-141 ref|YP_002981281.1| binding-protein-dependent transport systems ... 507 e-141 ref|YP_001898830.1| binding-protein-dependent transport systems ... 506 e-141 ref|YP_583561.1| glutathione ABC transporter permease GsiC [Cupr... 495 e-138 >ref|YP_003775262.1| dipeptide/oligopeptide/nickel ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ63354.1| ABC-type dipeptide/oligopeptide/nickel transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 306 Score = 521 bits (1341), Expect = e-146, Method: Composition-based stats. Identities = 290/306 (94%), Positives = 303/306 (99%) Query: 28 MFSYVIKRLLGLIPTLLLVAVLVFLFVHLLPGDPARLAAGPEADEKTVALVRADLGLDKP 87 MFS+VIKRLLGLIPTLLLVAVLVFLFVHLLPGDPARLAAGPEAD+KTVALVRADLGLDKP Sbjct: 1 MFSFVIKRLLGLIPTLLLVAVLVFLFVHLLPGDPARLAAGPEADDKTVALVRADLGLDKP 60 Query: 88 LPEQFVNFFINAAHGDFGRSIRSKRPVSEEIAARFWPTLWLTIVAMIWAVLFGLIIGISS 147 LPEQFVNFF+NAA GDFG SIR+KRPVSEEI+ARFWPTLWLT+VAM+WAVLFGLIIGISS Sbjct: 61 LPEQFVNFFLNAARGDFGHSIRTKRPVSEEISARFWPTLWLTVVAMVWAVLFGLIIGISS 120 Query: 148 AVWRNKWPDRLGMTLAVSGISFPAFSLGILLMQVFSVELGWLPTVGDETWRHYILPSLTL 207 AVWRN+WPDRLGMTLAVSGISFPAFSLGILL+QVFSV+LGWLPTVGD+TW HYILPS+TL Sbjct: 121 AVWRNQWPDRLGMTLAVSGISFPAFSLGILLVQVFSVKLGWLPTVGDDTWLHYILPSITL 180 Query: 208 GAAVAAVMARFTRSSFIEILQEDFVRTARAKGLTETVVVIKHCLRNALIPVVTMMGLQFG 267 GAAVAAVMARFTRSSFIEILQEDFVRTARAKGLTETVVVIKHCLRNALIPVVTMMGLQFG Sbjct: 181 GAAVAAVMARFTRSSFIEILQEDFVRTARAKGLTETVVVIKHCLRNALIPVVTMMGLQFG 240 Query: 268 FLLGGSILVEVVFNWPGMGRLLVDAVEMRDYPIIQAEILLFSLEFIFINLVVDVLYAVIN 327 FLLGGSILVEVVFNWPGMGRLLVDAVEMRDYP+IQAEILLFSLEFIFINLVVDVLYAVIN Sbjct: 241 FLLGGSILVEVVFNWPGMGRLLVDAVEMRDYPVIQAEILLFSLEFIFINLVVDVLYAVIN 300 Query: 328 PSIRFK 333 PSIRFK Sbjct: 301 PSIRFK 306 >ref|ZP_07676888.1| glutathione ABC transporter, permease protein GsiC [Ralstonia sp. 5_7_47FAA] gb|EFP64891.1| glutathione ABC transporter, permease protein GsiC [Ralstonia sp. 5_7_47FAA] Length = 307 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 253/306 (82%), Positives = 287/306 (93%) Query: 28 MFSYVIKRLLGLIPTLLLVAVLVFLFVHLLPGDPARLAAGPEADEKTVALVRADLGLDKP 87 M +Y IKR+LG+IPTLL+VAVLVFLFVHLLPGDPARLAAGPEADE TV LVR DLGLDKP Sbjct: 1 MLNYFIKRVLGVIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADETTVDLVRKDLGLDKP 60 Query: 88 LPEQFVNFFINAAHGDFGRSIRSKRPVSEEIAARFWPTLWLTIVAMIWAVLFGLIIGISS 147 + EQFV FF NAA G+FG SIR+KRPVSEEI RFWPTL LTI +M+WAV+FG++IGI+S Sbjct: 61 MHEQFVRFFANAARGEFGNSIRTKRPVSEEIGERFWPTLNLTITSMVWAVVFGMVIGITS 120 Query: 148 AVWRNKWPDRLGMTLAVSGISFPAFSLGILLMQVFSVELGWLPTVGDETWRHYILPSLTL 207 AVWRNKWPDRLGMTLAVSGISFPAF+LG+LLM+VFSV+LGWLP++G ++W+HYILPSLTL Sbjct: 121 AVWRNKWPDRLGMTLAVSGISFPAFALGMLLMEVFSVQLGWLPSIGADSWKHYILPSLTL 180 Query: 208 GAAVAAVMARFTRSSFIEILQEDFVRTARAKGLTETVVVIKHCLRNALIPVVTMMGLQFG 267 GAAVAAVMARFTR+SF+E+LQEDFVRTARAKG+ ETVVVIKHCLRNA+IPVVTMMGLQFG Sbjct: 181 GAAVAAVMARFTRASFVEVLQEDFVRTARAKGVRETVVVIKHCLRNAMIPVVTMMGLQFG 240 Query: 268 FLLGGSILVEVVFNWPGMGRLLVDAVEMRDYPIIQAEILLFSLEFIFINLVVDVLYAVIN 327 FLLGGSI+VE VFNWPG+GRLLVDAVEMRDYP+IQAE+LLFSLEFI INLVVD+LY VIN Sbjct: 241 FLLGGSIVVEKVFNWPGLGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDMLYTVIN 300 Query: 328 PSIRFK 333 P+IR+K Sbjct: 301 PTIRYK 306 >ref|YP_002981281.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12D] gb|ACS62609.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12D] Length = 307 Score = 507 bits (1305), Expect = e-141, Method: Composition-based stats. Identities = 254/306 (83%), Positives = 285/306 (93%) Query: 28 MFSYVIKRLLGLIPTLLLVAVLVFLFVHLLPGDPARLAAGPEADEKTVALVRADLGLDKP 87 M +Y IKR LG+IPTLL+VAVLVFLFVHLLPGDPARLAAGPEADE TV LVR DLGLDKP Sbjct: 1 MLNYFIKRALGVIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADETTVDLVRKDLGLDKP 60 Query: 88 LPEQFVNFFINAAHGDFGRSIRSKRPVSEEIAARFWPTLWLTIVAMIWAVLFGLIIGISS 147 + EQFV FF NAA G+FG SIR+KRPVSEEI RFWPTL LTI +M+WAV+FG++IGI+S Sbjct: 61 MHEQFVRFFANAARGEFGNSIRTKRPVSEEIGERFWPTLNLTITSMVWAVVFGMVIGITS 120 Query: 148 AVWRNKWPDRLGMTLAVSGISFPAFSLGILLMQVFSVELGWLPTVGDETWRHYILPSLTL 207 AVWRNKWPDRLGMTLAVSGISFPAF+LG+LLM+VFSV+LGWLP +G +TW+HYILPSLTL Sbjct: 121 AVWRNKWPDRLGMTLAVSGISFPAFALGMLLMEVFSVQLGWLPAIGADTWKHYILPSLTL 180 Query: 208 GAAVAAVMARFTRSSFIEILQEDFVRTARAKGLTETVVVIKHCLRNALIPVVTMMGLQFG 267 GAAVAAVMARFTR+SF+E+LQEDFVRTARAKG+ ETVVVIKHCLRNA+IPVVTMMGLQFG Sbjct: 181 GAAVAAVMARFTRASFVEVLQEDFVRTARAKGVRETVVVIKHCLRNAMIPVVTMMGLQFG 240 Query: 268 FLLGGSILVEVVFNWPGMGRLLVDAVEMRDYPIIQAEILLFSLEFIFINLVVDVLYAVIN 327 FLLGGSI+VE VFNWPG+GRLLVDAVEMRDYP+IQAE+LLFSLEFI INLVVD+LY VIN Sbjct: 241 FLLGGSIVVEKVFNWPGLGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDMLYTVIN 300 Query: 328 PSIRFK 333 P+IR+K Sbjct: 301 PTIRYK 306 >ref|YP_001898830.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] gb|ACD26398.1| binding-protein-dependent transport systems inner membrane component [Ralstonia pickettii 12J] Length = 307 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 254/306 (83%), Positives = 285/306 (93%) Query: 28 MFSYVIKRLLGLIPTLLLVAVLVFLFVHLLPGDPARLAAGPEADEKTVALVRADLGLDKP 87 M +Y IKR LG+IPTLL+VAVLVFLFVHLLPGDPARLAAGPEADE TV LVR DLGLDKP Sbjct: 1 MLNYFIKRALGVIPTLLIVAVLVFLFVHLLPGDPARLAAGPEADEMTVDLVRKDLGLDKP 60 Query: 88 LPEQFVNFFINAAHGDFGRSIRSKRPVSEEIAARFWPTLWLTIVAMIWAVLFGLIIGISS 147 + EQFV FF NAA G+FG SIR+KRPVSEEI RFWPTL LTI +M+WAV+FG++IGI+S Sbjct: 61 MHEQFVRFFANAARGEFGNSIRTKRPVSEEIGERFWPTLNLTITSMVWAVIFGMVIGITS 120 Query: 148 AVWRNKWPDRLGMTLAVSGISFPAFSLGILLMQVFSVELGWLPTVGDETWRHYILPSLTL 207 AVWRNKWPDRLGMTLAVSGISFPAF+LG+LLM+VFSV+LGWLP +G +TW+HYILPSLTL Sbjct: 121 AVWRNKWPDRLGMTLAVSGISFPAFALGMLLMEVFSVQLGWLPAIGADTWKHYILPSLTL 180 Query: 208 GAAVAAVMARFTRSSFIEILQEDFVRTARAKGLTETVVVIKHCLRNALIPVVTMMGLQFG 267 GAAVAAVMARFTR+SF+E+LQEDFVRTARAKG+ ETVVVIKHCLRNA+IPVVTMMGLQFG Sbjct: 181 GAAVAAVMARFTRASFVEVLQEDFVRTARAKGVRETVVVIKHCLRNAMIPVVTMMGLQFG 240 Query: 268 FLLGGSILVEVVFNWPGMGRLLVDAVEMRDYPIIQAEILLFSLEFIFINLVVDVLYAVIN 327 FLLGGSI+VE VFNWPG+GRLLVDAVEMRDYP+IQAE+LLFSLEFI INLVVD+LY VIN Sbjct: 241 FLLGGSIVVEKVFNWPGLGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDMLYTVIN 300 Query: 328 PSIRFK 333 P+IR+K Sbjct: 301 PTIRYK 306 >ref|YP_583561.1| glutathione ABC transporter permease GsiC [Cupriavidus metallidurans CH34] gb|ABF08292.1| putative peptide transporter permease subunit: membrane component of ABC superfamily [Cupriavidus metallidurans CH34] Length = 306 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 249/306 (81%), Positives = 283/306 (92%) Query: 28 MFSYVIKRLLGLIPTLLLVAVLVFLFVHLLPGDPARLAAGPEADEKTVALVRADLGLDKP 87 M +Y +KRLLG+IPT+L+VAVLVFLFVHLLPGDPARLAAGPEAD TV LVR DLGLD+P Sbjct: 1 MLNYFLKRLLGVIPTMLIVAVLVFLFVHLLPGDPARLAAGPEADADTVELVRKDLGLDRP 60 Query: 88 LPEQFVNFFINAAHGDFGRSIRSKRPVSEEIAARFWPTLWLTIVAMIWAVLFGLIIGISS 147 +PEQFV +F NA GDFG S+R+KRPVSEEI RF PTL+LTI +M+WAV+FG+ IGI S Sbjct: 61 MPEQFVRYFSNALRGDFGTSLRTKRPVSEEIGDRFLPTLYLTIASMVWAVIFGMTIGICS 120 Query: 148 AVWRNKWPDRLGMTLAVSGISFPAFSLGILLMQVFSVELGWLPTVGDETWRHYILPSLTL 207 AVWRN+WPDRLGMTLAVSGISFPAF+LG+LLM+VFSV+LGWLP++G ++W+HYILPSLTL Sbjct: 121 AVWRNQWPDRLGMTLAVSGISFPAFALGMLLMEVFSVQLGWLPSIGADSWKHYILPSLTL 180 Query: 208 GAAVAAVMARFTRSSFIEILQEDFVRTARAKGLTETVVVIKHCLRNALIPVVTMMGLQFG 267 GAAVAAVMARFTR+SFIE+LQEDFVRTARAKG+ ETVVVIKH LRNA+IPVVTMMGLQFG Sbjct: 181 GAAVAAVMARFTRASFIEVLQEDFVRTARAKGVRETVVVIKHTLRNAMIPVVTMMGLQFG 240 Query: 268 FLLGGSILVEVVFNWPGMGRLLVDAVEMRDYPIIQAEILLFSLEFIFINLVVDVLYAVIN 327 FLLGGSILVE VFNWPG+GRLLVDAVEMRDYP+IQAE+LLFSLEFI INLVVDVLY VIN Sbjct: 241 FLLGGSILVEKVFNWPGLGRLLVDAVEMRDYPVIQAEVLLFSLEFILINLVVDVLYTVIN 300 Query: 328 PSIRFK 333 P+IR+K Sbjct: 301 PTIRYK 306