BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2247.p (328 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775259.1| peptidase T2, asparaginase 2 protein [Herbas... 524 e-147 ref|YP_004229253.1| beta-aspartyl-peptidase [Burkholderia sp. CC... 378 e-103 ref|YP_001896748.1| asparaginase [Burkholderia phytofirmans PsJN... 367 2e-99 ref|YP_004751256.1| isoaspartyl aminopeptidase @ Asp-X dipeptida... 364 8e-99 ref|YP_001860393.1| asparaginase [Burkholderia phymatum STM815] ... 364 9e-99 >ref|YP_003775259.1| peptidase T2, asparaginase 2 protein [Herbaspirillum seropedicae SmR1] gb|ADJ63351.1| peptidase T2, asparaginase 2 protein [Herbaspirillum seropedicae SmR1] Length = 328 Score = 524 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 302/328 (92%), Positives = 311/328 (94%) Query: 1 MTTPVIAIHGGAGTITRASLSAEDEARYHQALSDIVAAGQAVLNAGGSALEAVTEAVRLL 60 MT PVIAIHGGAGTITRASL+AEDEARYHQAL+DIVAAGQAVLNAGGSALEAVTEAVRLL Sbjct: 1 MTIPVIAIHGGAGTITRASLTAEDEARYHQALADIVAAGQAVLNAGGSALEAVTEAVRLL 60 Query: 61 EDCPLFNAGHGAVYTSEGKHELDACVMNGADLASGAVACVTNLRNPILAARTVMEKSEHV 120 EDCPLFNAGHGAVYTSEGKHELDACVMNG DLASGAVACVTNLRNP+LAARTVME SEHV Sbjct: 61 EDCPLFNAGHGAVYTSEGKHELDACVMNGTDLASGAVACVTNLRNPVLAARTVMEHSEHV 120 Query: 121 LLVGPAAEAFAARHGAVTVEPDYFHTDARHEQWQRVRGQSRAMLDHDASSFAFAEKAAEP 180 LLVGPAAE+FAARHGAVTVEP YFHTDARHEQW RVRGQSRAMLDHDASSFAFAEKAA P Sbjct: 121 LLVGPAAESFAARHGAVTVEPGYFHTDARHEQWLRVRGQSRAMLDHDASSFAFAEKAAAP 180 Query: 181 KEPIDPDNKFGTVGAVALDQFGNLAAATSTGGITNKQAGRVGDTPLIGAGCYAANATAAI 240 EPIDPD+KFGTVGAVALDQFGNLAAATSTGGITNKQ GRVGD+P+IGAGCYA NAT A+ Sbjct: 181 TEPIDPDHKFGTVGAVALDQFGNLAAATSTGGITNKQPGRVGDSPIIGAGCYANNATVAV 240 Query: 241 SATGTGEAFMRTAACYDIGARMAYAGQSLEEASRAVVFETLPKVGGRGGVIAIDRHGNLA 300 SATGTGEAFMRTAACYDI ARMAYAGQSLE AS AVVFETLPKVGGRGGVIAID GNLA Sbjct: 241 SATGTGEAFMRTAACYDIAARMAYAGQSLEAASHAVVFETLPKVGGRGGVIAIDGQGNLA 300 Query: 301 LPFNTEGMYRAWGCGELAPVTAIYAAPA 328 LPFNTEGMYRA+G GELAPVTAIYAA A Sbjct: 301 LPFNTEGMYRAYGRGELAPVTAIYAAQA 328 >ref|YP_004229253.1| beta-aspartyl-peptidase [Burkholderia sp. CCGE1001] gb|ADX56193.1| Beta-aspartyl-peptidase [Burkholderia sp. CCGE1001] Length = 331 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 214/328 (65%), Positives = 249/328 (75%), Gaps = 5/328 (1%) Query: 2 TTPVIAIHGGAGTITRASLSAEDEARYHQALSDIVAAGQAVLNAGGSALEAVTEAVRLLE 61 T VIAIHGGAGTI RASL+A EA YH AL ++A GQ VL GGSAL+AV+EAVRLLE Sbjct: 3 TNAVIAIHGGAGTIVRASLTANAEAEYHAALHAVLATGQRVLADGGSALDAVSEAVRLLE 62 Query: 62 DCPLFNAGHGAVYTSEGKHELDACVMNGADLASGAVACVTNLRNPILAARTVMEKSEHVL 121 DCPLFNAG GAVYT+ G HELDA +M+G+ L +GA+ CV +RNPILAAR+V+E SEHVL Sbjct: 63 DCPLFNAGRGAVYTAAGTHELDAAIMDGSTLEAGAICCVKRVRNPILAARSVLEHSEHVL 122 Query: 122 LVGPAAEAFAARHGAVTVEPDYFHTDARHEQWQRVRGQSRAMLDHDASSFAFAEKAA--- 178 G AE+FAA G VEPDYF T+ARH QW R Q RAMLDHD +SFAF+ A Sbjct: 123 FTGEGAESFAAAQGLEFVEPDYFDTEARHRQWLLARDQQRAMLDHDGASFAFSSSATGGD 182 Query: 179 --EPKEPIDPDNKFGTVGAVALDQFGNLAAATSTGGITNKQAGRVGDTPLIGAGCYAANA 236 P EP+DP+ KFGTVGAVALD G++AAATSTGGITNKQAGRVGDTPLIGAGCYA +A Sbjct: 183 DPTPHEPLDPNRKFGTVGAVALDAHGHVAAATSTGGITNKQAGRVGDTPLIGAGCYADDA 242 Query: 237 TAAISATGTGEAFMRTAACYDIGARMAYAGQSLEEASRAVVFETLPKVGGRGGVIAIDRH 296 T A+S TG+GE FMR A YD+ A+MAY SL++A+ VV LPK+ GRGG+IA+D Sbjct: 243 TCAVSTTGSGEMFMRMVAAYDVAAQMAYRNVSLQDAAHDVVMNRLPKIDGRGGLIAVDAR 302 Query: 297 GNLALPFNTEGMYRAWGCGELAPVTAIY 324 GN+ALPFNTEGMYR + PVTAIY Sbjct: 303 GNIALPFNTEGMYRGFARVGETPVTAIY 330 >ref|YP_001896748.1| asparaginase [Burkholderia phytofirmans PsJN] gb|ACD17524.1| Asparaginase [Burkholderia phytofirmans PsJN] Length = 330 Score = 367 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 211/327 (64%), Positives = 248/327 (75%), Gaps = 4/327 (1%) Query: 2 TTPVIAIHGGAGTITRASLSAEDEARYHQALSDIVAAGQAVLNAGGSALEAVTEAVRLLE 61 + VIAIHGGAGTI R S+SA EA YH AL +++AGQ VL GGSAL+AV+EAVRLLE Sbjct: 3 SNAVIAIHGGAGTILRTSMSASAEAEYHAALHAVLSAGQRVLTDGGSALDAVSEAVRLLE 62 Query: 62 DCPLFNAGHGAVYTSEGKHELDACVMNGADLASGAVACVTNLRNPILAARTVMEKSEHVL 121 DCPLFNAG GAVYT+ G HELDA +M+G+ L +GA+ CV +RNPILAAR V+E+SEHVL Sbjct: 63 DCPLFNAGRGAVYTAAGTHELDAAIMDGSTLEAGAICCVKRVRNPILAARRVLERSEHVL 122 Query: 122 LVGPAAEAFAARHGAVTVEPDYFHTDARHEQWQRVRGQSRAMLDHDASSFAFAEKAAE-- 179 G AEAFAA G EP+YFHT+ARH QW RGQ RAMLDHD ++ A A + Sbjct: 123 FTGEGAEAFAAAQGLEFAEPEYFHTEARHRQWLIARGQQRAMLDHDGATLAAAPSPNDGD 182 Query: 180 --PKEPIDPDNKFGTVGAVALDQFGNLAAATSTGGITNKQAGRVGDTPLIGAGCYAANAT 237 P EPIDP+ KFGTVGAVALDQ G++AAATSTGG+TNKQAGRVGDTPLIGAGCYA +AT Sbjct: 183 PTPHEPIDPNRKFGTVGAVALDQHGHVAAATSTGGVTNKQAGRVGDTPLIGAGCYADDAT 242 Query: 238 AAISATGTGEAFMRTAACYDIGARMAYAGQSLEEASRAVVFETLPKVGGRGGVIAIDRHG 297 A+S TG+GE FMR A YD+ A+MAY SL+EA+ VV LPK+ GRGG+IA+D G Sbjct: 243 CAVSTTGSGEMFMRMVAAYDVAAQMAYRNVSLQEAADDVVMNRLPKIDGRGGLIAVDARG 302 Query: 298 NLALPFNTEGMYRAWGCGELAPVTAIY 324 N+ LPFNTEGMYR + PVTAIY Sbjct: 303 NVTLPFNTEGMYRGFARLGETPVTAIY 329 >ref|YP_004751256.1| isoaspartyl aminopeptidase @ Asp-X dipeptidase [Collimonas fungivorans Ter331] gb|AEK60433.1| Isoaspartyl aminopeptidase @ Asp-X dipeptidase [Collimonas fungivorans Ter331] Length = 328 Score = 364 bits (935), Expect = 8e-99, Method: Composition-based stats. Identities = 214/320 (66%), Positives = 247/320 (77%), Gaps = 7/320 (2%) Query: 6 IAIHGGAGTITRASLSAEDEARYHQALSDIVAAGQAVLNAGGSALEAVTEAVRLLEDCPL 65 IAIHGGAGTI R++++ E YH AL++I++AGQ +L AGGSAL+AV AV +LEDCPL Sbjct: 14 IAIHGGAGTILRSAMNTAQEQAYHDALTEILSAGQKILAAGGSALDAVACAVSMLEDCPL 73 Query: 66 FNAGHGAVYTSEGKHELDACVMNGADLASGAVACVTNLRNPILAARTVMEKSEHVLLVGP 125 FNAG GAVYT G HELDA +M+GA L +GA+A V ++RNPIL AR VME SEH+LLVG Sbjct: 74 FNAGKGAVYTHAGTHELDAAIMDGATLDAGAIANVGHVRNPILGARAVMEHSEHILLVGA 133 Query: 126 AAEAFAARHGAVTVEPDYFHTDARHEQWQRVRGQS-RAMLDHDASSFAFAEKAAEPKEPI 184 AE F A+HG VEPDYFHT+ARH QW R R Q +LDHDA+S KAAE PI Sbjct: 134 GAETFVAQHGVELVEPDYFHTEARHAQWLRARDQEGMLLLDHDATS-----KAAEIA-PI 187 Query: 185 DPDNKFGTVGAVALDQFGNLAAATSTGGITNKQAGRVGDTPLIGAGCYAANATAAISATG 244 DPDNKFGTVGAVA+D GNLAAATSTGGITNK+ GRVGD+PLIGAGCYA N T A+SATG Sbjct: 188 DPDNKFGTVGAVAVDMHGNLAAATSTGGITNKRVGRVGDSPLIGAGCYANNRTVAVSATG 247 Query: 245 TGEAFMRTAACYDIGARMAYAGQSLEEASRAVVFETLPKVGGRGGVIAIDRHGNLALPFN 304 TGEAFMRT A YDI ARM YAGQSL +A+ VV LP+ GRGG+IAID GN+ALPFN Sbjct: 248 TGEAFMRTVAAYDISARMEYAGQSLADAAEQVVMNLLPRYQGRGGLIAIDAEGNVALPFN 307 Query: 305 TEGMYRAWGCGELAPVTAIY 324 TEGMYR + AP+TAIY Sbjct: 308 TEGMYRGYAKVGAAPLTAIY 327 >ref|YP_001860393.1| asparaginase [Burkholderia phymatum STM815] gb|ACC73347.1| Asparaginase [Burkholderia phymatum STM815] Length = 340 Score = 364 bits (935), Expect = 9e-99, Method: Composition-based stats. Identities = 207/337 (61%), Positives = 247/337 (73%), Gaps = 14/337 (4%) Query: 2 TTPVIAIHGGAGTITRASLSAEDEARYHQALSDIVAAGQAVLNAGGSALEAVTEAVRLLE 61 T V+AIHGGAGTI RAS++ + EARYH L ++ A Q VL GGSAL+AVT+AVRLLE Sbjct: 3 TNAVVAIHGGAGTILRASMAPDAEARYHAELRAVLVAAQRVLADGGSALDAVTQAVRLLE 62 Query: 62 DCPLFNAGHGAVYTSEGKHELDACVMNGADLASGAVACVTNLRNPILAARTVMEKSEHVL 121 DCPLFNAGHGAV+TS G HELDA +M+G L +GAV+CV +RNPI+AAR V+E SEHV+ Sbjct: 63 DCPLFNAGHGAVFTSAGTHELDASIMDGRTLEAGAVSCVKRVRNPIVAARHVLEYSEHVM 122 Query: 122 LVGPAAEAFAARHGAVTVEPDYFHTDARHEQWQRVRGQSRAMLDHDASSFAFAEKAAE-- 179 AEAFA G V+P YFHTDAR+ QWQ R Q RAMLDHD +S A A+ A+ Sbjct: 123 FTAEGAEAFAQEQGLEFVDPSYFHTDARYRQWQLAREQQRAMLDHDGASLAAAQSTAQST 182 Query: 180 ------------PKEPIDPDNKFGTVGAVALDQFGNLAAATSTGGITNKQAGRVGDTPLI 227 P EP+DP+ KFGTVGAVA+D +G++AAATSTGG+TNKQ GRVGD PLI Sbjct: 183 AQAPASASNDALPHEPLDPNRKFGTVGAVAVDLYGHVAAATSTGGVTNKQIGRVGDAPLI 242 Query: 228 GAGCYAANATAAISATGTGEAFMRTAACYDIGARMAYAGQSLEEASRAVVFETLPKVGGR 287 GAGCYA NAT A+S TG+GE FMR A YD+ A+MAY G SLEEA+ VV LP++ GR Sbjct: 243 GAGCYADNATCAVSTTGSGEMFMRMVAAYDVAAQMAYRGASLEEAANDVVMNRLPRIDGR 302 Query: 288 GGVIAIDRHGNLALPFNTEGMYRAWGCGELAPVTAIY 324 GG+IA+D GN+ LPFNTEGMYR + APVTAIY Sbjct: 303 GGLIAVDARGNVVLPFNTEGMYRGYARVGEAPVTAIY 339