BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2242.p (225 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775255.1| hypothetical protein Hsero_1837 [Herbaspiril... 408 e-112 ref|YP_004753472.1| hypothetical protein CFU_2823 [Collimonas fu... 330 8e-89 gb|EFV83569.1| hypothetical protein HMPREF0005_02987 [Achromobac... 318 3e-85 ref|YP_004490412.1| hypothetical protein DelCs14_5086 [Delftia s... 318 5e-85 ref|YP_001562474.1| hypothetical protein Daci_1445 [Delftia acid... 316 2e-84 >ref|YP_003775255.1| hypothetical protein Hsero_1837 [Herbaspirillum seropedicae SmR1] gb|ADJ63347.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 225 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 207/225 (92%), Positives = 216/225 (96%) Query: 1 MKLTFTLPDQSPLHADIDTLVIAGWAGRDMAAIEHHIEELEALGISRPSAVPLFYRVSAN 60 MKLTFTLPDQS L A+I TLVIAGWAGRDMAAIEHHIEELEALGISRPSAVPLFYRVSAN Sbjct: 1 MKLTFTLPDQSSLQAEIHTLVIAGWAGRDMAAIEHHIEELEALGISRPSAVPLFYRVSAN 60 Query: 61 QLSQAAQVQVLGEASSGEVETFVFNSGGELYVSIASDHTDRKLEAHSVAFSKQACVKPVG 120 QLSQAAQVQVLGEASSGEVETFVFN+GGELYVSIASDHTDRKLEAHSVAFSKQACVKPVG Sbjct: 61 QLSQAAQVQVLGEASSGEVETFVFNAGGELYVSIASDHTDRKLEAHSVAFSKQACVKPVG 120 Query: 121 SSAWKLSDVAEYWDELVIRSWIEEDGATKLYQEGTLASLRTPGDLIARFTQGGATLPEGC 180 ++AWKL+DVAEYWDELVIRSWIEEDG +KLYQEG LASLRTP DLI RFT+G A LPEGC Sbjct: 121 TTAWKLADVAEYWDELVIRSWIEEDGQSKLYQEGPLASLRTPADLIERFTEGRAQLPEGC 180 Query: 181 GMTCGTVGAIGGIRPAASFTMELFDPRRQRALRHHYVSESLAEVA 225 GMTCGTVGAIGGIRPAASFTMELFDPRRQRALRHHYV++SLAEVA Sbjct: 181 GMTCGTVGAIGGIRPAASFTMELFDPRRQRALRHHYVAQSLAEVA 225 >ref|YP_004753472.1| hypothetical protein CFU_2823 [Collimonas fungivorans Ter331] gb|AEK62649.1| hypothetical protein CFU_2823 [Collimonas fungivorans Ter331] Length = 228 Score = 330 bits (847), Expect = 8e-89, Method: Composition-based stats. Identities = 168/215 (78%), Positives = 185/215 (86%) Query: 11 SPLHADIDTLVIAGWAGRDMAAIEHHIEELEALGISRPSAVPLFYRVSANQLSQAAQVQV 70 S L ADI TL++AGWAGRD AAIEHHIEEL ALGISRPSAVPL+YR+++NQL+QA QVQV Sbjct: 14 SRLDADIHTLIVAGWAGRDHAAIEHHIEELAALGISRPSAVPLYYRIASNQLTQAGQVQV 73 Query: 71 LGEASSGEVETFVFNSGGELYVSIASDHTDRKLEAHSVAFSKQACVKPVGSSAWKLSDVA 130 +G SSGEVETFVF +GGELYVSIASDHTDRKLEAHSVA SKQACVKPV + AW+L++VA Sbjct: 74 VGPDSSGEVETFVFAAGGELYVSIASDHTDRKLEAHSVALSKQACVKPVATGAWRLAEVA 133 Query: 131 EYWDELVIRSWIEEDGATKLYQEGTLASLRTPGDLIARFTQGGATLPEGCGMTCGTVGAI 190 EYWDELVIRS+IEE+G T LYQEG LASLRTP DLIA +T G A LP G GMTCGTV AI Sbjct: 134 EYWDELVIRSYIEENGETVLYQEGPLASLRTPQDLIAGYTNGAAMLPAGSGMTCGTVAAI 193 Query: 191 GGIRPAASFTMELFDPRRQRALRHHYVSESLAEVA 225 GGIRPA SFTMELFDPRRQR LRH Y E L E+A Sbjct: 194 GGIRPAQSFTMELFDPRRQRILRHSYQVEVLPEIA 228 >gb|EFV83569.1| hypothetical protein HMPREF0005_02987 [Achromobacter xylosoxidans C54] Length = 227 Score = 318 bits (816), Expect = 3e-85, Method: Composition-based stats. Identities = 159/227 (70%), Positives = 186/227 (81%), Gaps = 2/227 (0%) Query: 1 MKLTFTLPDQSPLHADID--TLVIAGWAGRDMAAIEHHIEELEALGISRPSAVPLFYRVS 58 MK F + SP ++D TL++AGWAGRDMAAIEHHIEEL A+G+ RP++VPL+YR++ Sbjct: 1 MKAVFQIEADSPRQVEVDFNTLIVAGWAGRDMAAIEHHIEELAAIGVPRPTSVPLYYRIA 60 Query: 59 ANQLSQAAQVQVLGEASSGEVETFVFNSGGELYVSIASDHTDRKLEAHSVAFSKQACVKP 118 NQL+QA QVQ +G SSGEVETFVF +GGE+YVSIASDHTDRKLE SVA SKQ CVKP Sbjct: 61 DNQLTQAEQVQAVGADSSGEVETFVFAAGGEMYVSIASDHTDRKLETVSVAMSKQVCVKP 120 Query: 119 VGSSAWKLSDVAEYWDELVIRSWIEEDGATKLYQEGTLASLRTPGDLIARFTQGGATLPE 178 V ++AW+L+DVA+YWDELVIRS+I E+GA LYQEG LASLRTP DLIA +T G ATLPE Sbjct: 121 VATTAWRLADVADYWDELVIRSYIVENGAEVLYQEGPLASLRTPQDLIAGYTGGAATLPE 180 Query: 179 GCGMTCGTVGAIGGIRPAASFTMELFDPRRQRALRHHYVSESLAEVA 225 G GMTCGTVGAIGGIRP+A F MEL+DPRRQR+LRH Y E L VA Sbjct: 181 GAGMTCGTVGAIGGIRPSAGFAMELYDPRRQRSLRHRYHVEILPVVA 227 >ref|YP_004490412.1| hypothetical protein DelCs14_5086 [Delftia sp. Cs1-4] gb|AEF92057.1| hypothetical protein DelCs14_5086 [Delftia sp. Cs1-4] Length = 225 Score = 318 bits (814), Expect = 5e-85, Method: Composition-based stats. Identities = 156/225 (69%), Positives = 181/225 (80%) Query: 1 MKLTFTLPDQSPLHADIDTLVIAGWAGRDMAAIEHHIEELEALGISRPSAVPLFYRVSAN 60 M+L FT P+ + DTL++AGWAGRD AIEHHIEEL A+GI RPSAVPL+YR+S+N Sbjct: 1 MQLQFTTPEGQTFAPEFDTLIVAGWAGRDREAIEHHIEELAAIGIPRPSAVPLYYRISSN 60 Query: 61 QLSQAAQVQVLGEASSGEVETFVFNSGGELYVSIASDHTDRKLEAHSVAFSKQACVKPVG 120 QLSQ + +QVLG SSGEVE FVF GE++VS+ASDHTDRKLEA+SVAFSKQACVKPV Sbjct: 61 QLSQRSALQVLGPDSSGEVEVFVFTHEGEMFVSLASDHTDRKLEAYSVAFSKQACVKPVA 120 Query: 121 SSAWKLSDVAEYWDELVIRSWIEEDGATKLYQEGTLASLRTPGDLIARFTQGGATLPEGC 180 + AW+ +DVA +WDELV+RSWI EDG LYQEGTLASLRTP DLIA FT G LP GC Sbjct: 121 TQAWRFADVAGHWDELVVRSWIVEDGREVLYQEGTLASLRTPQDLIAGFTGGKDLLPAGC 180 Query: 181 GMTCGTVGAIGGIRPAASFTMELFDPRRQRALRHHYVSESLAEVA 225 GMTCGTVGAIGGIRP+ F+MEL+DPR QR++RH Y SE L VA Sbjct: 181 GMTCGTVGAIGGIRPSTQFSMELYDPRSQRSIRHSYRSELLDVVA 225 >ref|YP_001562474.1| hypothetical protein Daci_1445 [Delftia acidovorans SPH-1] gb|ABX34089.1| conserved hypothetical protein [Delftia acidovorans SPH-1] Length = 225 Score = 316 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 155/225 (68%), Positives = 181/225 (80%) Query: 1 MKLTFTLPDQSPLHADIDTLVIAGWAGRDMAAIEHHIEELEALGISRPSAVPLFYRVSAN 60 M+L FT P+ + DTL++AGWAGRD AIEHHIEEL A+GI RPSAVPL+YR+S+N Sbjct: 1 MQLQFTTPEGQTFAPEFDTLIVAGWAGRDREAIEHHIEELAAIGIPRPSAVPLYYRISSN 60 Query: 61 QLSQAAQVQVLGEASSGEVETFVFNSGGELYVSIASDHTDRKLEAHSVAFSKQACVKPVG 120 QLSQ + +QVLG SSGEVE FVF GE++VS+ASDHTDRKLEA+SVAFSKQACVKPV Sbjct: 61 QLSQRSALQVLGADSSGEVEVFVFTHEGEMFVSLASDHTDRKLEAYSVAFSKQACVKPVA 120 Query: 121 SSAWKLSDVAEYWDELVIRSWIEEDGATKLYQEGTLASLRTPGDLIARFTQGGATLPEGC 180 + AW+ +DVA +WDELV+RSWI EDG LYQEGTLASLRTP DLIA FT G LP GC Sbjct: 121 TQAWRFADVAGHWDELVVRSWIVEDGREVLYQEGTLASLRTPQDLIAGFTGGKDLLPAGC 180 Query: 181 GMTCGTVGAIGGIRPAASFTMELFDPRRQRALRHHYVSESLAEVA 225 GMTCGTVGAIGGIRP+ F+MEL+DPR +R++RH Y SE L VA Sbjct: 181 GMTCGTVGAIGGIRPSTQFSMELYDPRSRRSIRHSYRSELLDVVA 225