BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2239.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775252.1| transglycosylase signal peptide protein [Her... 373 e-101 ref|YP_001099109.1| putative transglycosylase [Herminiimonas ars... 214 1e-53 ref|YP_004753186.1| lytic transglycosylase [Collimonas fungivora... 206 4e-51 ref|ZP_08275557.1| Lytic transglycosylase, catalytic [Oxalobacte... 205 8e-51 ref|YP_003746293.1| lytic transglycosylase [Ralstonia solanacear... 174 1e-41 >ref|YP_003775252.1| transglycosylase signal peptide protein [Herbaspirillum seropedicae SmR1] gb|ADJ63344.1| transglycosylase signal peptide protein [Herbaspirillum seropedicae SmR1] Length = 250 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 214/252 (84%), Positives = 225/252 (89%), Gaps = 8/252 (3%) Query: 44 MRVEAADSGRDSTGTAAASKKSKTIVYRYTDADGAVHFYAQTLDDPDKLMASSASLLNHP 103 MRVEAADS D + SKK+++IVYRYTDADGAVHFYAQTLDDPDKLMASSA+LLNH Sbjct: 1 MRVEAADSSSDGGSKGSGSKKAQSIVYRYTDADGAVHFYAQTLDDPDKLMASSAALLNHA 60 Query: 104 GSKEAVTPADPPFVRTMLAHRDARKYDDLLTEAAGEFGLDAALLKAVMTAESGFNATAVS 163 SKEAVTPADPPFVRTML+HRDARKYD LLT+AA EFGLDAALLKAVMTAESGFNA AVS Sbjct: 61 ESKEAVTPADPPFVRTMLSHRDARKYDPLLTQAASEFGLDAALLKAVMTAESGFNAKAVS 120 Query: 164 SKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELA 223 SKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELA Sbjct: 121 SKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELA 180 Query: 224 IASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYELYRPAGALRLAAGERGNANASGNA 283 IASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFY+LYRP G LA ++G+A Sbjct: 181 IASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYQLYRPDGGATLA--------SAGSA 232 Query: 284 RLKVTLPPREPA 295 RLKVTLPP PA Sbjct: 233 RLKVTLPPHAPA 244 >ref|YP_001099109.1| putative transglycosylase [Herminiimonas arsenicoxydans] emb|CAL60982.1| putative Lytic transglycosylase [Herminiimonas arsenicoxydans] Length = 269 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 114/200 (57%), Positives = 137/200 (68%), Gaps = 5/200 (2%) Query: 69 VYRYTDADGAVHFYAQTLDDPDKLMASSASLLNHP-----GSKEAVTPADPPFVRTMLAH 123 VY Y DA G HF + LD +L A +LN GS E + P R + H Sbjct: 24 VYGYIDASGEAHFATEKLDQRYQLFARGDQVLNAARLVPLGSTEKGAEKETPLFRYLSQH 83 Query: 124 RDARKYDDLLTEAAGEFGLDAALLKAVMTAESGFNATAVSSKGAVGLMQILPDTAERYGL 183 + +KY+ LL +AA EF LD ALLKAVM AESGFN AVS KGAVGLMQ++P TAER+GL Sbjct: 84 PNLKKYEKLLNDAANEFNLDPALLKAVMAAESGFNPNAVSPKGAVGLMQLMPATAERFGL 143 Query: 184 QGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELAIASYNAGEGAVQKYGNKIPP 243 Q DR+KT+ QKLTDPK NIRL ARYLR L M+P L +ASYNAGEGA+QKY N IPP Sbjct: 144 QADRKKTVAQKLTDPKTNIRLGARYLRVLRDMYPNQQHLVLASYNAGEGAIQKYNNTIPP 203 Query: 244 YPETQGYVRLVSRFYELYRP 263 +PET+ YV+LV++FY LY+P Sbjct: 204 FPETRNYVKLVTQFYRLYQP 223 >ref|YP_004753186.1| lytic transglycosylase [Collimonas fungivorans Ter331] gb|AEK62363.1| Lytic transglycosylase, catalytic [Collimonas fungivorans Ter331] Length = 288 Score = 206 bits (524), Expect = 4e-51, Method: Composition-based stats. Identities = 117/234 (50%), Positives = 155/234 (66%), Gaps = 8/234 (3%) Query: 65 SKTIVYRYTDADGAVHFYAQTLDDPDKLMASSASLLNHP----GSKEAVTPA--DPPFVR 118 ++ ++ Y DADG HF + LD+ +L + G + ++PA D P R Sbjct: 28 ARADIFGYIDADGMGHFSTEKLDNRYQLFMRGDGFFDSSQLAAGGAKPLSPALRDSPLFR 87 Query: 119 TMLAHRDARKYDDLLTEAAGEFGLDAALLKAVMTAESGFNATAVSSKGAVGLMQILPDTA 178 + H + +KY+ L+ +AA EF L+ ALLKAVM AESGFN AVS KGA+GLMQI+P TA Sbjct: 88 YLSQHPNLKKYEALVDQAAQEFALEPALLKAVMAAESGFNPAAVSPKGAIGLMQIMPATA 147 Query: 179 ERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELAIASYNAGEGAVQKYG 238 ERYGL GD +K + +KLTDP+ NIRL ARYLRDL+ ++P EL IASYNAGEGAVQKY Sbjct: 148 ERYGLTGDSKKPVEKKLTDPRTNIRLGARYLRDLLKLYPAQQELVIASYNAGEGAVQKYN 207 Query: 239 NKIPPYPETQGYVRLVSRFYELYRPAGALRLAAGERGNANASGNARLKVTLPPR 292 NK+PPY ET+ YV+LV +FY+LY+PA A A+ G G R+++ +P R Sbjct: 208 NKVPPYAETRNYVQLVRQFYQLYQPAFAQSAASTNAG--GKPGLNRIRLVIPGR 259 >ref|ZP_08275557.1| Lytic transglycosylase, catalytic [Oxalobacteraceae bacterium IMCC9480] gb|EGF30974.1| Lytic transglycosylase, catalytic [Oxalobacteraceae bacterium IMCC9480] Length = 240 Score = 205 bits (521), Expect = 8e-51, Method: Composition-based stats. Identities = 118/242 (48%), Positives = 153/242 (63%), Gaps = 21/242 (8%) Query: 57 GTAAASKKSKTIVYRYTDADGAVHFYAQTLDDPDKLMASSASLLNHPGSKEAVTPADP-- 114 T S ++ VY Y DA G HF + LD+ +L + + +TPA P Sbjct: 2 ATCLLSSAARADVYGYVDAQGDTHFSTEALDERYQLFIKGDGVFD----SSQLTPAAPEP 57 Query: 115 ---PFVRTMLAHRDARKYDDLLTEAAGEFGLDAALLKAVMTAESGFNATAVSSKGAVGLM 171 P + + H + +K++D+L AA EF +D AL+KA+M AESGFN A+S KGA+GLM Sbjct: 58 LRTPLFKVLTEHPNLKKFEDVLAAAAAEFKVDLALMKAMMAAESGFNPAAISPKGAIGLM 117 Query: 172 QILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHVELAIASYNAGE 231 QI+P TAERYGL GD RK++ QKL+DP N+RLAARYLR+L A+FP L IASYNAGE Sbjct: 118 QIMPATAERYGLVGDARKSIQQKLSDPTTNVRLAARYLRELSALFPNQQALVIASYNAGE 177 Query: 232 GAVQKYGNKIPPYPETQGYVRLVSRFYELYRP-AGALRLAAGERGNANASGNARLKVTLP 290 GAVQKY N IPPYPET+ YVRLV++FY+ Y P AL +A G R+ +T+P Sbjct: 178 GAVQKYRNTIPPYPETRNYVRLVTQFYQFYVPQVPALAVATG-----------RIHLTIP 226 Query: 291 PR 292 R Sbjct: 227 GR 228 >ref|YP_003746293.1| lytic transglycosylase [Ralstonia solanacearum CFBP2957] emb|CBJ43692.1| putative lytic transglycosylase [Ralstonia solanacearum CFBP2957] Length = 282 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 103/227 (45%), Positives = 135/227 (59%), Gaps = 24/227 (10%) Query: 63 KKSKTIVYRYTDADGAVHFYAQTLDDPDKLMASSASLLNHPGSKEAVTPADPP------- 115 + ++ VY Y D +G HF A LDD L A++ G + DPP Sbjct: 20 QPARADVYGYIDENGLAHFAASRLDDRYVLFMKGAAVAGESGIAQPA--GDPPDADAYLN 77 Query: 116 ---------------FVRTMLAHRDARKYDDLLTEAAGEFGLDAALLKAVMTAESGFNAT 160 VR ++ H +A + L+ +AA G+D AL+KAV+ AESGFN Sbjct: 78 ATRRDALDNAGMRQRLVRAVMQHPNAPTVEPLIRQAAHRHGVDPALVKAVIAAESGFNPQ 137 Query: 161 AVSSKGAVGLMQILPDTAERYGLQGDRRKTLHQKLTDPKINIRLAARYLRDLMAMFPQHV 220 AVS KGA+GLMQ++P+T ERYG+ GD R+TL QKL DP+INI RYL DL+ MF ++ Sbjct: 138 AVSPKGAIGLMQVIPETGERYGVTGDARRTLAQKLADPQINIATGVRYLSDLLRMFSGNL 197 Query: 221 ELAIASYNAGEGAVQKYGNKIPPYPETQGYVRLVSRFYELYRPAGAL 267 EL +A+YNAGEGAVQK+GN IPPY ETQ YV+ V +FY Y P A+ Sbjct: 198 ELVLAAYNAGEGAVQKHGNDIPPYAETQNYVKTVLQFYRYYNPVAAV 244