BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2236.p (293 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_07262773.1| hypothetical protein Psyrps6_07127 [Pseudomon... 187 2e-45 ref|ZP_02000358.1| conserved hypothetical protein [Beggiatoa sp.... 105 7e-21 ref|ZP_05636783.1| hypothetical protein PsyrptA_05738 [Pseudomon... 103 3e-20 gb|EGH21922.1| hypothetical protein PSYMO_10600 [Pseudomonas syr... 103 4e-20 gb|EFW85686.1| hypothetical protein PsgRace4_12918 [Pseudomonas ... 101 1e-19 >ref|ZP_07262773.1| hypothetical protein Psyrps6_07127 [Pseudomonas syringae pv. syringae 642] Length = 338 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 109/298 (36%), Positives = 161/298 (54%), Gaps = 14/298 (4%) Query: 1 MEKMGWKNSATLMKKWFDSPGYTMTREQKEGLVGASQYPSHLLETSLITMEWALSFPRIK 60 M+ +GWK SA LM+KWF S MT ++K G S+YPS L++T+ + ++W LSF R K Sbjct: 50 MDSLGWKVSAALMRKWFSSSAREMTLDEKLGRTPPSKYPSALVDTTTVKLDWILSFERAK 109 Query: 61 REYDGMFGSRNLYKSIPPLYENPKAKKLLIKRLFRANKFTESPQSFGDLTKSALALDEEW 120 Y S +L+ + ++ P+A+ L +R+ RA FT + FGDL+ + E W Sbjct: 110 AVYQSALSS-SLFGTYG--FDIPEARDQLARRIKRAGLFTTRVEVFGDLSSPPIWQHEHW 166 Query: 121 QFQRHSVDDNREYLNAWWKDSTTADPDLDDMWGALARFTFKIAGEGTVTPKKKVVKSGGQ 180 QF+ +D + + LDD++GALA F ++ GTVTP ++V +G Sbjct: 167 QFRLFKIDTTQIDRGKIFLSG------LDDLFGALASFGLYLSAAGTVTPDTEIVDTGSA 220 Query: 181 SSVLVEHYEINVSRIGVYIRDTYDFNGNQYLGHWSKHSAPHVRVYPLSYFAGGRG----- 235 ++V+ Y+I ++ I VY RDTYDF G QYLGHW+K V Y L G Sbjct: 221 CKLVVKTYQIEITHIAVYARDTYDFIGAQYLGHWNKDGVEVVFNYILEEKIGTLNPSDYQ 280 Query: 236 EKGICPDDFVSVTNERFNSHRKMTGFGGDLIVLSDVLATTLKRPFRFRVTPQDITNIS 293 G PD + V N FN +RK GGD+++ SD+ LKRP R+ +T Q + +S Sbjct: 281 PSGDPPDMKLPVGNWSFNEYRKKHNKGGDMLIFSDLKTIRLKRPLRYNITHQQVAKLS 338 >ref|ZP_02000358.1| conserved hypothetical protein [Beggiatoa sp. PS] gb|EDN69640.1| conserved hypothetical protein [Beggiatoa sp. PS] Length = 237 Score = 105 bits (263), Expect = 7e-21, Method: Composition-based stats. Identities = 83/277 (29%), Positives = 125/277 (45%), Gaps = 64/277 (23%) Query: 1 MEKMGWKNSATLMKKWFDSPGYTMTREQKEGLVGASQYPSHLLETSLITMEWALSFPRIK 60 M W A L++KWF+ P + Y T+L +W L+FPR+K Sbjct: 13 MRTNHWHIGAELLEKWFERPA------------NSDPYAGTPDTTTLKMDDWVLTFPRVK 60 Query: 61 REYDGMFGSRNLYKSIPPLYENPKAKKLLIKRLFRANKFTESPQSFGDLTKSALALDEEW 120 R YD MF + ++ N KA+ ++IK L K S+GD + + +D+++ Sbjct: 61 RVYDKMFAQK--------IWLNEKAQPVIIKMLKEKGKLGYERVSYGDFSLAMPVIDKDY 112 Query: 121 -QFQRHSVDDNREYLNAWWKDSTTADPDLDDMWGALARFTFKIAGEGTVTPKKKVVKSGG 179 Q++R NA+W DP DD++ AL R T ++A +G VTP K Sbjct: 113 IQYRRVG--------NAFW------DPT-DDLFTALGRLTLRMAIKGFVTPMPK------ 151 Query: 180 QSSVLVEHYEINVSRIGVYIRDTYDFNGNQYLGHWSKHSAPHVRVYPLSYFAGGRGEKGI 239 + I++ +GVY+RD+YDFNG Q+LG+W + R ++F G + Sbjct: 152 ------GSHAIHIEEVGVYVRDSYDFNGPQHLGYWDIANNYGGR----NFFKGTK----- 196 Query: 240 CPDDFVSVTNERFNSHRKMTGFGGDLIVLSDVLATTL 276 V N F R GGD IV SD+ T L Sbjct: 197 -------VKNADFREWRNRQSKGGDYIVFSDIKITQL 226 >ref|ZP_05636783.1| hypothetical protein PsyrptA_05738 [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EGH92327.1| hypothetical protein PSYTB_21850 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 308 Score = 103 bits (258), Expect = 3e-20, Method: Composition-based stats. Identities = 86/294 (29%), Positives = 126/294 (42%), Gaps = 45/294 (15%) Query: 1 MEKMGWKNSATLMKKWFDSPGYTMTRE---QKEGLVGASQYPSHLLETSLITMEWALSFP 57 M MGW +A LM++WFDSP + M E Q+ S P+ E S++ MEWA+ F Sbjct: 52 MRSMGWNTAAALMQRWFDSPAWEMPEEWKVQETQPDPMSLSPAQCDE-SIVKMEWAMQFE 110 Query: 58 RIKR---EYDGMFGSRNLYKSIPPLYENPKAKKLLIKRLFRANKFTESPQSFGDLTKSAL 114 R ++ E + + + N + L EN + + +L G T +AL Sbjct: 111 RCRQAVEEAELLLTTVNAIARLNKLLENAGWRGTGVFQL-------------GSTTMTAL 157 Query: 115 ALDEEWQ--FQRHSVDDNREYLNAWWKDSTTADPDLDDMWGALARFTFKIAGEGTVTPKK 172 +D Q F R + +AW LDDM+GAL T KI G K Sbjct: 158 QMDSLSQVNFIR--------FGSAW--------NTLDDMYGALGLATLKIGVTGKAFSKI 201 Query: 173 KVVKSGGQSSVLVEHYEINVSRIGVYIRDTYDFNGNQYLGHWSKHSAPHVRVYPLSYFAG 232 + H ++ +IG YIRD YDFNG+QYLG W++ A ++ Sbjct: 202 DIPTQNA-------HNYFHIDQIGFYIRDHYDFNGSQYLGTWTEDRALTKTETVIAMTPQ 254 Query: 233 GRGEKGICPDDFVSVTNERFNSHRKMTGFGGDLIVLSDVLATTLKRPFRFRVTP 286 G+ + F ++TN F +R GGD + SD+L L + V P Sbjct: 255 GKLIIRMKDGPFAAITNSHFREYRSTVSNGGDFFIYSDILWKKLDQTIDLGVRP 308 >gb|EGH21922.1| hypothetical protein PSYMO_10600 [Pseudomonas syringae pv. mori str. 301020] Length = 308 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 87/294 (29%), Positives = 129/294 (43%), Gaps = 45/294 (15%) Query: 1 MEKMGWKNSATLMKKWFDSPGYTMTRE---QKEGLVGASQYPSHLLETSLITMEWALSFP 57 M MGW +A LM++WFDSP + M E Q+ S P+ E S++ MEWA+ F Sbjct: 52 MRSMGWNTAAALMQRWFDSPAWEMPEEWKVQETQPDPMSLSPAQCDE-SIVKMEWAMQFE 110 Query: 58 RIKR---EYDGMFGSRNLYKSIPPLYENPKAKKLLIKRLFRANKFTESPQSFGDLTKSAL 114 R ++ E + + + N + L EN + + +L G T +AL Sbjct: 111 RCRQAVEEAELLLTTVNAIARLNKLLENAGWRGTGVFQL-------------GSTTMTAL 157 Query: 115 ALDEEWQ--FQRHSVDDNREYLNAWWKDSTTADPDLDDMWGALARFTFKIAGEGTVTPKK 172 +D Q F R + +AW LDDM+GAL T KI G K Sbjct: 158 QMDSLSQVNFIR--------FGSAW--------NTLDDMYGALGLATLKIGVTGKAFSK- 200 Query: 173 KVVKSGGQSSVLVEHYEINVSRIGVYIRDTYDFNGNQYLGHWSKHSAPHVRVYPLSYFAG 232 + + Q++ H ++ +IG YIRD YDFNG QYLG W++ A ++ Sbjct: 201 --IDTSTQNA----HNYFHIDQIGFYIRDHYDFNGPQYLGTWTEDRALTKTETVIAMTPQ 254 Query: 233 GRGEKGICPDDFVSVTNERFNSHRKMTGFGGDLIVLSDVLATTLKRPFRFRVTP 286 G+ + F ++TN F +R GGD + SD+L L + V P Sbjct: 255 GKLIIRMKDGPFAAITNSHFREYRSTVSNGGDFFIYSDILWKKLDQTIDLGVRP 308 >gb|EFW85686.1| hypothetical protein PsgRace4_12918 [Pseudomonas syringae pv. glycinea str. race 4] Length = 308 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 86/294 (29%), Positives = 129/294 (43%), Gaps = 45/294 (15%) Query: 1 MEKMGWKNSATLMKKWFDSPGYTMTRE---QKEGLVGASQYPSHLLETSLITMEWALSFP 57 M MGW +A LM++WFDSP + M E Q+ S P+ E S++ MEWA+ F Sbjct: 52 MRNMGWNTAAALMQRWFDSPAWEMPEEWKVQETQPDPMSLSPAQCDE-SIVKMEWAMQFE 110 Query: 58 RIKR---EYDGMFGSRNLYKSIPPLYENPKAKKLLIKRLFRANKFTESPQSFGDLTKSAL 114 R ++ E + + + N + L EN + + +L G T +AL Sbjct: 111 RCRQAVEEAELLLTTVNAIARLNKLLENAGWRGTGVFQL-------------GSTTMTAL 157 Query: 115 ALDEEWQ--FQRHSVDDNREYLNAWWKDSTTADPDLDDMWGALARFTFKIAGEGTVTPKK 172 +D Q F R + +AW LDDM+GAL T K G K Sbjct: 158 QMDSLSQVNFIR--------FGSAW--------NTLDDMYGALGLATLKTGVTGKAFSK- 200 Query: 173 KVVKSGGQSSVLVEHYEINVSRIGVYIRDTYDFNGNQYLGHWSKHSAPHVRVYPLSYFAG 232 + + Q++ H ++ +IG YIRD YDFNG+QYLG W++ A ++ Sbjct: 201 --IDTPTQNA----HNYFHIDQIGFYIRDHYDFNGSQYLGTWTEDRALTKTETVIAMTPQ 254 Query: 233 GRGEKGICPDDFVSVTNERFNSHRKMTGFGGDLIVLSDVLATTLKRPFRFRVTP 286 G+ + F ++TN F +R GGD + SD+L L + V P Sbjct: 255 GKLIIRMKDGPFAAITNSHFREYRSTVSNGGDFFIYSDILWKKLDQTIDLGVRP 308