BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2225.p (195 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775239.1| hypothetical protein Hsero_1821 [Herbaspiril... 304 5e-81 ref|YP_004215280.1| hypothetical protein Rahaq_4572 [Rahnella sp... 181 7e-44 ref|ZP_01896873.1| hypothetical protein PE36_01847 [Moritella sp... 127 9e-28 ref|ZP_08372548.1| conserved hypothetical protein [Escherichia c... 126 1e-27 ref|YP_003385759.1| hypothetical protein Slin_0906 [Spirosoma li... 125 3e-27 >ref|YP_003775239.1| hypothetical protein Hsero_1821 [Herbaspirillum seropedicae SmR1] gb|ADJ63331.1| hypothetical protein Hsero_1821 [Herbaspirillum seropedicae SmR1] Length = 171 Score = 304 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 150/171 (87%), Positives = 159/171 (92%) Query: 25 LSGPQWVTRFPGSNRTSDLNSSFRQSAEDFIVALRAAGANVRISATYRPRERAYLMHYCV 84 +SGPQWVTRFPGSNR SDLNSSFRQ+ E FI AL AGANVRISATYRPRERAYLMHYCV Sbjct: 1 MSGPQWVTRFPGSNRISDLNSSFRQAIESFISALTTAGANVRISATYRPRERAYLMHYCV 60 Query: 85 KISKGLIAPDKVPKMSGVEIEWDHGDGRASKNAAAEMARGYTIVHPPALISRHTERAAID 144 K++KGLI+PD+VP M+GVEIEWDHGD R+SKNAAA+MAR YTIVHPPALISRHTERAAID Sbjct: 61 KVAKGLISPDRVPTMNGVEIEWDHGDDRSSKNAAAQMARSYTIVHPPALISRHTERAAID 120 Query: 145 MTITGIIGKTMLDASAQAVEVTDNTVLYRIGASYGCHKLIPDPPHWSDNGT 195 MTITGIIGKTMLDASA AVEVTDN VLYRIGASYGCHKLI DPPHWSDNGT Sbjct: 121 MTITGIIGKTMLDASAAAVEVTDNAVLYRIGASYGCHKLISDPPHWSDNGT 171 >ref|YP_004215280.1| hypothetical protein Rahaq_4572 [Rahnella sp. Y9602] gb|ADW76153.1| hypothetical protein Rahaq_4572 [Rahnella sp. Y9602] Length = 1162 Score = 181 bits (458), Expect = 7e-44, Method: Composition-based stats. Identities = 92/172 (53%), Positives = 118/172 (68%), Gaps = 1/172 (0%) Query: 24 ELSGPQWVTRFPGSNRTSDLNSSFRQSAEDFIVALRAAGANVRISATYRPRERAYLMHYC 83 E SG QWV R+P S +DL FR+S +F++A++ G V +SATYRP ERAYLMHY Sbjct: 990 EPSGRQWVNRYPTSVSLTDLEVPFRESVNNFVLAIKTGGGGVSVSATYRPVERAYLMHYS 1049 Query: 84 VKISKGLIAPDKVPKMSGVEIEWDH-GDGRASKNAAAEMARGYTIVHPPALISRHTERAA 142 I++ +AP +VP M+GV I+W H GD A+ AA EM GY IV+ P L SRHT+R A Sbjct: 1050 WMIARESLAPAQVPPMNGVNIDWQHKGDNSAAVAAAEEMVAGYQIVYRPVLTSRHTQRRA 1109 Query: 143 IDMTITGIIGKTMLDASAQAVEVTDNTVLYRIGASYGCHKLIPDPPHWSDNG 194 IDMTITG+IGKT++ + +N+ LY +GASYG KLI DPPHWSD+G Sbjct: 1110 IDMTITGVIGKTIVTKLNIETPIKNNSDLYSVGASYGVIKLISDPPHWSDDG 1161 >ref|ZP_01896873.1| hypothetical protein PE36_01847 [Moritella sp. PE36] gb|EDM68684.1| hypothetical protein PE36_01847 [Moritella sp. PE36] Length = 190 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 78/189 (41%), Positives = 102/189 (53%), Gaps = 16/189 (8%) Query: 22 LPELSGPQWV----TRFPGSNRTSDLNSSFRQSAEDFIVALRAAGANVRISATYRPRERA 77 +P SG WV T S + DL+ F+ + + FI AL AGA V +S T R +RA Sbjct: 1 MPTNSGKYWVSWANTHAKNSIKVDDLDVLFKANVKAFIKALTDAGAQVVVSTTKRSNKRA 60 Query: 78 YLMHYCVKISKGLIAPDKVPKMSGVEIEWDHGDGRASKNAAAEMARGYTI------VHPP 131 YL H+ KIS+G P KMSGV+I WDHG+ SK A EM RG+ + ++PP Sbjct: 61 YLFHWSWKISQGKCKPSDAAKMSGVDIAWDHGELTKSKAGALEMVRGFGLAVPPRSINPP 120 Query: 132 ALISRHTERAAIDMTI--TGIIGKTMLDASAQAV----EVTDNTVLYRIGASYGCHKLIP 185 +L S H AIDMTI TG I D + +A+ N L+++G S+G KL Sbjct: 121 SLTSNHIAGKAIDMTITWTGTINVKKKDGNEEALTFYTNANTNIALHKVGESFGVKKLKT 180 Query: 186 DPPHWSDNG 194 D PHWS NG Sbjct: 181 DAPHWSFNG 189 >ref|ZP_08372548.1| conserved hypothetical protein [Escherichia coli TA280] gb|EGI42100.1| conserved hypothetical protein [Escherichia coli TA280] Length = 187 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 79/186 (42%), Positives = 102/186 (54%), Gaps = 12/186 (6%) Query: 21 MLPELSGPQWVTRFPGSNRTSDLNSSFRQSAEDFIVALRAAGANVRISATYRPRERAYLM 80 M ELSG WV+RFPGS+ T+DL +FR S ++F+ AL A A V ISATYRP RAYLM Sbjct: 1 MAKELSGALWVSRFPGSSSTNDLQGTFRASVDNFLRALGNARARVSISATYRPPARAYLM 60 Query: 81 HYCVKISKGLIAPDKVPKMSGVEIEWDHGDGRASKNAAAEMARGYTIVH---PPALISRH 137 H+ I+ ++ VP M GV+IEW H +AS AA M Y + + PAL S H Sbjct: 61 HWSWLIAHEIVQAKNVPAMEGVDIEWVHPTEQASLEAAQAMVTAYGMNNLNVAPALSSNH 120 Query: 138 TERAAIDMTITGIIGKTMLDASAQAVEVTD------NTVLYRIGASYGCHKLI---PDPP 188 T AIDM I+ T+ ++ Q V + N L +G YG K + D P Sbjct: 121 TRGTAIDMNISWSGTLTIAGSNGQNVAINTLHRTGMNAQLQAVGLGYGVRKFVGGNTDIP 180 Query: 189 HWSDNG 194 HWS +G Sbjct: 181 HWSIDG 186 >ref|YP_003385759.1| hypothetical protein Slin_0906 [Spirosoma linguale DSM 74] gb|ADB36960.1| hypothetical protein Slin_0906 [Spirosoma linguale DSM 74] Length = 192 Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats. Identities = 77/174 (44%), Positives = 94/174 (54%), Gaps = 4/174 (2%) Query: 25 LSGPQWVTRFPGSNRTSDLNSSFRQSAEDFIVALRAAGANVRISATYRPRERAYLMHYCV 84 LSG WV FP S L+S FR++ + FI AL+ AGA V +SAT RP +RAYLMH+ Sbjct: 18 LSGKIWVAMFPTSKSLEALSSPFRENIKAFINALKRAGATVSVSATLRPPQRAYLMHFSF 77 Query: 85 KISKGLIAPDKVPKMSGVEIEWDHGDGRASKNAAAEMARGYTIV---HPPALISRHTERA 141 I+ P VP M+ V IEW HG+ S AA EM Y I PPAL+S H Sbjct: 78 LIAHSKQDPRNVPSMNDVNIEWFHGNIEDSIKAAKEMVNAYGIATTKTPPALMSNHISGN 137 Query: 142 AIDMTITGIIGKTMLDASAQAVEVTDNTVLYRIGASYGC-HKLIPDPPHWSDNG 194 AIDMTI+ GK + + V L IGASY +K+ D PHWS G Sbjct: 138 AIDMTISEFNGKEIAKQDGAFITVNVFNDLRTIGASYNVFNKIADDLPHWSTTG 191