BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2223.p (208 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004154006.1| NAD(P)h dehydrogenase (quinone) [Variovorax ... 196 2e-48 ref|YP_002976460.1| NAD(P)H dehydrogenase (quinone) [Rhizobium l... 193 1e-47 gb|EGP45419.1| NAD(P)h dehydrogenase (quinone) [Achromobacter xy... 184 9e-45 gb|EFV82761.1| NAD(P)H dehydrogenase [Achromobacter xylosoxidans... 179 2e-43 ref|ZP_06687902.1| FMN-dependent NADH-azoreductase 4 [Achromobac... 172 2e-41 >ref|YP_004154006.1| NAD(P)h dehydrogenase (quinone) [Variovorax paradoxus EPS] gb|ADU35895.1| NAD(P)H dehydrogenase (quinone) [Variovorax paradoxus EPS] Length = 219 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 107/191 (56%), Positives = 126/191 (65%), Gaps = 3/191 (1%) Query: 1 MKILHLLASPRQEASNAWWLSRQIVERLGAQHPQAKVILRDLYASGIAHIDSAYADALGS 60 MKILH++ SPR EAS ++ LSR+IV RL + P A V R + + + HID+ YA LG Sbjct: 17 MKILHIVCSPRGEASESYRLSRKIVARLMGREPAATVTNRVIGGNALPHIDANYA--LGQ 74 Query: 61 PVALEDRDTGPGTLALSDRLIEELEQVDQVVIGTPMHNYTVPSVLKAWIDHVVRVRRTFA 120 A + G G++A SD LI ELE D VVIGTPMHN VPS LKAWIDHVVR RRTF Sbjct: 75 HSATAEIAHG-GSMAQSDELIRELEDSDAVVIGTPMHNLGVPSALKAWIDHVVRARRTFD 133 Query: 121 ITPDGKTGLLRDRPVHVAVVSGGRFTGASARQPDFLTPYLKVALATIGLHDLRFTVMEGL 180 P GK G LRDRPV +A+ SGG F+G ARQPDFLTPYL V LA IGL DL F ++G Sbjct: 134 TGPGGKVGTLRDRPVFIAIASGGSFSGEYARQPDFLTPYLTVILAQIGLKDLHFFSVQGT 193 Query: 181 AAGAQAVRNER 191 G Q + R Sbjct: 194 GLGPQILEKSR 204 >ref|YP_002976460.1| NAD(P)H dehydrogenase (quinone) [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS56921.1| NAD(P)H dehydrogenase (quinone) [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 206 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 107/201 (53%), Positives = 131/201 (65%), Gaps = 4/201 (1%) Query: 3 ILHLLASPRQEASNAWWLSRQIVERLGAQHPQAKVILRDLYASGIAHIDSAYADALGSPV 62 ILH+ SPR +A+ ++ LS+ I+ L + P A V+ R + IAH+D+AYA + S Sbjct: 4 ILHVCCSPRGQAAESYRLSQAIIGFLLRREPGATVVERVIGNGTIAHVDAAYAISQASAA 63 Query: 63 ALEDRDTGPGTLALSDRLIEELEQVDQVVIGTPMHNYTVPSVLKAWIDHVVRVRRTFAIT 122 + G++ALS+ LI ELE D VVIGTPMHN TVPS LKAWIDHVVR RRTF I Sbjct: 64 DVSRE----GSMALSEELIRELEAADFVVIGTPMHNLTVPSALKAWIDHVVRARRTFTIG 119 Query: 123 PDGKTGLLRDRPVHVAVVSGGRFTGASARQPDFLTPYLKVALATIGLHDLRFTVMEGLAA 182 P GK G LRDRPV +A+ SGGRF+G ARQPDFLTPYLK LATIGL DL F ++G A Sbjct: 120 PAGKVGTLRDRPVFIAIASGGRFSGERARQPDFLTPYLKAILATIGLQDLIFFSVQGTGA 179 Query: 183 GAQAVRNERERVAVELDRQFS 203 G+ A R L+ FS Sbjct: 180 GSHAAAETRIGTHRALEEHFS 200 >gb|EGP45419.1| NAD(P)h dehydrogenase (quinone) [Achromobacter xylosoxidans AXX-A] Length = 212 Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats. Identities = 108/199 (54%), Positives = 130/199 (65%), Gaps = 4/199 (2%) Query: 1 MKILHLLASPRQEASNAWWLSRQIVERLGAQHPQAKVILRDLYASGIAHIDSAYADALGS 60 M +L L+ SPR S + LS+ IV+ L L ++ A+ + H+D+ YA ALGS Sbjct: 1 MSVLRLICSPRGAESESHRLSQFIVDGLARADVARGRDLVEIDANRLPHVDAEYAWALGS 60 Query: 61 PVALEDRDTGP-GTLALSDRLIEELEQVDQVVIGTPMHNYTVPSVLKAWIDHVVRVRRTF 119 P D D P G+L SDRLI+ L D VVI TPMHNYTVPS LK WIDHVVRVR TF Sbjct: 61 P---SDPDGDPAGSLRQSDRLIQSLADADYVVIATPMHNYTVPSALKVWIDHVVRVRSTF 117 Query: 120 AITPDGKTGLLRDRPVHVAVVSGGRFTGASARQPDFLTPYLKVALATIGLHDLRFTVMEG 179 +T +GK G+L D+PV VAV SGG F+G+ ARQPDFLTPYLKVALATIGL L F +EG Sbjct: 118 TVTREGKVGVLADKPVFVAVSSGGLFSGSEARQPDFLTPYLKVALATIGLKRLTFFSVEG 177 Query: 180 LAAGAQAVRNERERVAVEL 198 A G QA+ R R E+ Sbjct: 178 TAMGGQALEAARLRTRAEI 196 >gb|EFV82761.1| NAD(P)H dehydrogenase [Achromobacter xylosoxidans C54] Length = 212 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 108/204 (52%), Positives = 129/204 (63%), Gaps = 4/204 (1%) Query: 1 MKILHLLASPRQEASNAWWLSRQIVERLGAQHPQAKVILRDLYASGIAHIDSAYADALGS 60 M +L L SPR S + LS+ IV+ L + L +L A+ + H+D+ YA ALGS Sbjct: 1 MSVLRLTCSPRGADSESHRLSQFIVDGLARVDAERGHDLVELDANRLPHVDAEYAWALGS 60 Query: 61 PVALEDRDTGP-GTLALSDRLIEELEQVDQVVIGTPMHNYTVPSVLKAWIDHVVRVRRTF 119 D D P G+L SDRLI L D VVI TPMHNYTVPS LK WIDHVVRVR TF Sbjct: 61 S---RDPDGDPSGSLHQSDRLIRSLADADYVVIATPMHNYTVPSALKVWIDHVVRVRSTF 117 Query: 120 AITPDGKTGLLRDRPVHVAVVSGGRFTGASARQPDFLTPYLKVALATIGLHDLRFTVMEG 179 ++T +GK G+L DRPV VAV SGG F+G ARQPDFLTPYLK ALATIGL L F +EG Sbjct: 118 SVTREGKVGILVDRPVFVAVSSGGLFSGPDARQPDFLTPYLKAALATIGLKRLTFFSVEG 177 Query: 180 LAAGAQAVRNERERVAVELDRQFS 203 A G QA+ R R ++ F+ Sbjct: 178 TAMGGQALEAARLRAQADIAAHFA 201 >ref|ZP_06687902.1| FMN-dependent NADH-azoreductase 4 [Achromobacter piechaudii ATCC 43553] gb|EFF75146.1| FMN-dependent NADH-azoreductase 4 [Achromobacter piechaudii ATCC 43553] Length = 205 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 94/183 (51%), Positives = 117/183 (63%) Query: 1 MKILHLLASPRQEASNAWWLSRQIVERLGAQHPQAKVILRDLYASGIAHIDSAYADALGS 60 M ILH+ SPR AS + LS I++RL A + ++ A+ + H+D YA AL + Sbjct: 1 MSILHIFCSPRGRASESHRLSEHIIKRLVDASGDAAPTVVEIDATRLPHVDHDYACALSA 60 Query: 61 PVALEDRDTGPGTLALSDRLIEELEQVDQVVIGTPMHNYTVPSVLKAWIDHVVRVRRTFA 120 P D G L S +LI+ L +VI TPMHN+TVP+ LK WIDHVVRVR TF Sbjct: 61 PADPADEVLARGALRQSSQLIDALRDATHIVIATPMHNFTVPASLKVWIDHVVRVRSTFR 120 Query: 121 ITPDGKTGLLRDRPVHVAVVSGGRFTGASARQPDFLTPYLKVALATIGLHDLRFTVMEGL 180 ITPDGK G L DRPV+VAV SGG F+GA+ARQPDFLTPYL L TIGL ++ F ++G Sbjct: 121 ITPDGKIGNLPDRPVYVAVSSGGEFSGAAARQPDFLTPYLTHVLGTIGLKNVTFFSVQGT 180 Query: 181 AAG 183 A G Sbjct: 181 ARG 183