BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2218.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775236.1| hypothetical protein Hsero_1818 [Herbaspiril...   204   4e-51
ref|YP_001565575.1| 4-oxalocrotonate tautomerase [Delftia acidov...   179   1e-43
ref|YP_004487625.1| 4-oxalocrotonate tautomerase [Delftia sp. Cs...   176   8e-43
ref|YP_003980215.1| tautomerase enzyme family protein [Achromoba...   174   3e-42
ref|YP_486380.1| 4-oxalocrotonate tautomerase [Rhodopseudomonas ...   173   9e-42

>ref|YP_003775236.1| hypothetical protein Hsero_1818 [Herbaspirillum seropedicae SmR1]
 gb|ADJ63328.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 127

 Score =  204 bits (519), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 101/127 (79%), Positives = 114/127 (89%)

Query: 20  MPLVRISVLRGKSRSYRRAIADNIYEALRESFNVPEEDRFMVITEHDPEDLVFSRSYMGM 79
           MPLVRIS+LRGKSR+YR AIA+N+Y+ALRE FNVPE+DRFMVITEHDPE+L+FSRSYMGM
Sbjct: 1   MPLVRISLLRGKSRAYRNAIAENVYQALRERFNVPEDDRFMVITEHDPEELIFSRSYMGM 60

Query: 80  ARTDDFVLIQLTVSNTRTIEQKKALYARIVERLNQQPGIRPEDIFINLVEVNKENWSFGH 139
           ARTDDFVLIQLTVSNTRT  QK ALYARIVERL Q PGI P+D+ I+LVE +K NWSFG 
Sbjct: 61  ARTDDFVLIQLTVSNTRTQAQKNALYARIVERLQQDPGIAPDDVMISLVEGDKGNWSFGQ 120

Query: 140 GLAQYAL 146
           GLAQY +
Sbjct: 121 GLAQYVM 127


>ref|YP_001565575.1| 4-oxalocrotonate tautomerase [Delftia acidovorans SPH-1]
 gb|ABX37190.1| 4-oxalocrotonate tautomerase [Delftia acidovorans SPH-1]
          Length = 127

 Score =  179 bits (453), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 82/126 (65%), Positives = 109/126 (86%)

Query: 20  MPLVRISVLRGKSRSYRRAIADNIYEALRESFNVPEEDRFMVITEHDPEDLVFSRSYMGM 79
           MP+ RI++  GKS +YR+AI D++Y A+RE+FNVPE+D+FM ITEHD ++  +S SY+G+
Sbjct: 1   MPMTRINMRAGKSPAYRQAICDSLYRAMRETFNVPEDDQFMTITEHDGDNFRYSASYLGV 60

Query: 80  ARTDDFVLIQLTVSNTRTIEQKKALYARIVERLNQQPGIRPEDIFINLVEVNKENWSFGH 139
           AR+DD VL+QLTVSNTR++EQKKAL++RI E L + PG+RPED+F+NLVEV+KENWS GH
Sbjct: 61  ARSDDLVLVQLTVSNTRSLEQKKALFSRIAELLVESPGLRPEDVFVNLVEVDKENWSMGH 120

Query: 140 GLAQYA 145
           GLAQYA
Sbjct: 121 GLAQYA 126


>ref|YP_004487625.1| 4-oxalocrotonate tautomerase [Delftia sp. Cs1-4]
 gb|AEF89270.1| 4-oxalocrotonate tautomerase [Delftia sp. Cs1-4]
          Length = 127

 Score =  176 bits (447), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 81/126 (64%), Positives = 107/126 (84%)

Query: 20  MPLVRISVLRGKSRSYRRAIADNIYEALRESFNVPEEDRFMVITEHDPEDLVFSRSYMGM 79
           MP+ RI++  GKS +YR+AI D++Y A+RE+FNVPE+D+FM ITEHD ++  +  SY+G+
Sbjct: 1   MPMTRINMRAGKSPAYRQAICDSLYRAMRETFNVPEDDQFMTITEHDGDNFRYGASYLGV 60

Query: 80  ARTDDFVLIQLTVSNTRTIEQKKALYARIVERLNQQPGIRPEDIFINLVEVNKENWSFGH 139
           AR+DD VL+QLTVSNTR++EQKKAL+ RI E L + PG+RPED+F+NLVEV+KENWS GH
Sbjct: 61  ARSDDLVLVQLTVSNTRSLEQKKALFRRIAELLVESPGLRPEDVFVNLVEVDKENWSMGH 120

Query: 140 GLAQYA 145
           GLAQYA
Sbjct: 121 GLAQYA 126


>ref|YP_003980215.1| tautomerase enzyme family protein [Achromobacter xylosoxidans A8]
 gb|ADP17500.1| tautomerase enzyme family protein [Achromobacter xylosoxidans A8]
          Length = 126

 Score =  174 bits (442), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 80/126 (63%), Positives = 104/126 (82%)

Query: 20  MPLVRISVLRGKSRSYRRAIADNIYEALRESFNVPEEDRFMVITEHDPEDLVFSRSYMGM 79
           MPLV +S+  GK ++YR+AI DNIY A+RE+FNVPE+D+FM +TEHD  +  +S +YM +
Sbjct: 1   MPLVHVSLRAGKPQAYRQAIFDNIYLAMRETFNVPEDDQFMTMTEHDASNFRYSPTYMDV 60

Query: 80  ARTDDFVLIQLTVSNTRTIEQKKALYARIVERLNQQPGIRPEDIFINLVEVNKENWSFGH 139
           AR+DD V IQ+T +NTR++EQKKAL+ RI +RL   PG+RPED+F+NLVEV KENWSFGH
Sbjct: 61  ARSDDLVYIQITANNTRSLEQKKALFQRIAQRLGDDPGLRPEDVFVNLVEVAKENWSFGH 120

Query: 140 GLAQYA 145
           GLAQYA
Sbjct: 121 GLAQYA 126


>ref|YP_486380.1| 4-oxalocrotonate tautomerase [Rhodopseudomonas palustris HaA2]
 gb|ABD07469.1| 4-oxalocrotonate tautomerase [Rhodopseudomonas palustris HaA2]
          Length = 126

 Score =  173 bits (438), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 79/125 (63%), Positives = 106/125 (84%)

Query: 20  MPLVRISVLRGKSRSYRRAIADNIYEALRESFNVPEEDRFMVITEHDPEDLVFSRSYMGM 79
           MPLVRIS+  GKS +YR+A+ + +Y+ALR++FNVPEEDRF+V++EH   D  FS++YM +
Sbjct: 1   MPLVRISLRAGKSEAYRQAVGEGVYQALRDTFNVPEEDRFVVVSEHGAADFQFSKTYMDI 60

Query: 80  ARTDDFVLIQLTVSNTRTIEQKKALYARIVERLNQQPGIRPEDIFINLVEVNKENWSFGH 139
           AR+DD V+IQ+TVSNTR + QK+ALYARI E L ++PG+R ED+FINL+EV KENWSFG+
Sbjct: 61  ARSDDLVIIQITVSNTRNVAQKQALYARIAELLAREPGVRGEDVFINLIEVAKENWSFGN 120

Query: 140 GLAQY 144
           G+AQY
Sbjct: 121 GIAQY 125