BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2215.p (398 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775231.1| MocR family transcription regulator protein ... 761 0.0 ref|YP_004753188.1| putative valine-pyruvate aminotransferase [C... 629 e-178 ref|YP_001099107.1| putative aminotransferase [Herminiimonas ars... 612 e-173 ref|YP_001352392.1| transcriptional regulator [Janthinobacterium... 603 e-170 ref|ZP_08275996.1| putative aminotransferase [Oxalobacteraceae b... 554 e-156 >ref|YP_003775231.1| MocR family transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ63323.1| MocR family transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 398 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 391/398 (98%), Positives = 397/398 (99%) Query: 1 MKLENPAPLQWQFSQRAEAMKSSAIREILKVTMRPDITSFAGGLPSPLTFPVEHMKTAFD 60 MKLENPAPLQWQFSQRA+AMKSSAIREILKVTMRPDITSFAGGLPSPLTFPVEHMKTAFD Sbjct: 1 MKLENPAPLQWQFSQRADAMKSSAIREILKVTMRPDITSFAGGLPSPLTFPVEHMKTAFD 60 Query: 61 RVLSQQGKMALQYGPTDGYLPLREWIAASLSTDGAQITAEQVLMVSGSQQGLDLLGKVMI 120 RVLSQQGKMALQYGPTDGYLPLREWIAASLST+GAQI+AEQVLMVSGSQQGLDLLGKV+I Sbjct: 61 RVLSQQGKMALQYGPTDGYLPLREWIAASLSTNGAQISAEQVLMVSGSQQGLDLLGKVLI 120 Query: 121 DEGSKVLVETPSYLGALQAFSLYGAKFESVPSDEFGLQPETIEAIAGGARMLYSLPNFQN 180 DEGSKVLVETPSYLGALQAF+LYGAKFESVPSDEFGLQPETIEAIAGGARMLYSLPNFQN Sbjct: 121 DEGSKVLVETPSYLGALQAFALYGAKFESVPSDEFGLQPETIEAIAGGARMLYSLPNFQN 180 Query: 181 PTGRTLPTERRFKLVETCARLGLPLIEDDPYGALSYQNAPLPKMLSMNPSGVIYMGSFSK 240 PTGRTLPTERRFKLVETCARLGLPLIEDDPYGALSYQNAPLPKMLSMNPSGVIYMGSFSK Sbjct: 181 PTGRTLPTERRFKLVETCARLGLPLIEDDPYGALSYQNAPLPKMLSMNPSGVIYMGSFSK 240 Query: 241 VLTPGIRLGYVVAPRPLILKMEQAKQATDLHTAQLTQMVVYEAIKDGFLDQHVPTIRKLY 300 VLTPGIRLGYVVAPRPLILKMEQAKQATDLHTAQLTQMVVYEAIKDGFLDQHVPTIRKLY Sbjct: 241 VLTPGIRLGYVVAPRPLILKMEQAKQATDLHTAQLTQMVVYEAIKDGFLDQHVPTIRKLY 300 Query: 301 GDQCQAMLDALQQYFPASCSWSKPEGGMFIWVTLPEHLDASALLNEAVEQEKVAFVPGAP 360 GDQCQAMLDALQQYFPASCSWSKPEGGMFIWVTLPEH+DA ALLNEAVEQEKVAFVPGAP Sbjct: 301 GDQCQAMLDALQQYFPASCSWSKPEGGMFIWVTLPEHIDAGALLNEAVEQEKVAFVPGAP 360 Query: 361 FYANVAQKNTLRLSFVTVPPEQIRAGVERLGKLIASKL 398 FYANVAQKNTLRLSFVTVPPEQIRAGVERLGKLIASKL Sbjct: 361 FYANVAQKNTLRLSFVTVPPEQIRAGVERLGKLIASKL 398 >ref|YP_004753188.1| putative valine-pyruvate aminotransferase [Collimonas fungivorans Ter331] gb|AEK62365.1| putative valine-pyruvate aminotransferase [Collimonas fungivorans Ter331] Length = 397 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 315/398 (79%), Positives = 352/398 (88%), Gaps = 1/398 (0%) Query: 1 MKLENPAPLQWQFSQRAEAMKSSAIREILKVTMRPDITSFAGGLPSPLTFPVEHMKTAFD 60 MK+ENP PLQW FSQRA+ ++SSAIREILK+TMRP+I SFAGGLPSP TFPVE +K AFD Sbjct: 1 MKIENPTPLQWHFSQRAQKLQSSAIREILKITMRPEIISFAGGLPSPATFPVEQLKVAFD 60 Query: 61 RVLSQQGKMALQYGPTDGYLPLREWIAASLSTDGAQITAEQVLMVSGSQQGLDLLGKVMI 120 ++LS+QGK+ALQYGPTDGY PLREW+A SLST+GA+I A QV+M SGSQQGLDLLGKV+I Sbjct: 61 KILSEQGKVALQYGPTDGYGPLREWVANSLSTNGAKIMANQVMMTSGSQQGLDLLGKVLI 120 Query: 121 DEGSKVLVETPSYLGALQAFSLYGAKFESVPSDEFGLQPETIEAIAGGARMLYSLPNFQN 180 DE SKVLVETPSYLGALQAFSLYG +F SVPSDE GL PET+ + GARMLY+LPNFQN Sbjct: 121 DEDSKVLVETPSYLGALQAFSLYGPEFVSVPSDEGGLIPETVATLGQGARMLYALPNFQN 180 Query: 181 PTGRTLPTERRFKLVETCARLGLPLIEDDPYGALSYQNAPLPKMLSMNPSGVIYMGSFSK 240 PTGRTL ERR LV+ CARLGLPLIEDDPYGALSY+ PLPKMLSMNP GVIYMGSFSK Sbjct: 181 PTGRTLSVERRQALVDICARLGLPLIEDDPYGALSYRAEPLPKMLSMNPGGVIYMGSFSK 240 Query: 241 VLTPGIRLGYVVAPRPLILKMEQAKQATDLHTAQLTQMVVYEAIKDGFLDQHVPTIRKLY 300 +LTPGIRLGYVVAPRPLI K+EQAKQATDLHTAQLTQMVVYE IKDGFLDQH+PTIRKLY Sbjct: 241 ILTPGIRLGYVVAPRPLIEKLEQAKQATDLHTAQLTQMVVYETIKDGFLDQHIPTIRKLY 300 Query: 301 GDQCQAMLDALQQYFPASCSWSKPEGGMFIWVTLPEHLDASALLNEAVEQEKVAFVPGAP 360 DQC AMLDAL+ YFP+ SW+KPEGGMFIWVTLP+H+D++ LL EAVEQ VAFVPG P Sbjct: 301 SDQCDAMLDALKTYFPSGTSWTKPEGGMFIWVTLPKHIDSTKLLAEAVEQH-VAFVPGGP 359 Query: 361 FYANVAQKNTLRLSFVTVPPEQIRAGVERLGKLIASKL 398 FY N +++TLRLSFVTVPP +IR G+ERLGKLIASKL Sbjct: 360 FYGNTPEQHTLRLSFVTVPPAKIREGIERLGKLIASKL 397 >ref|YP_001099107.1| putative aminotransferase [Herminiimonas arsenicoxydans] emb|CAL60980.1| Putative aminotransferase [Herminiimonas arsenicoxydans] Length = 397 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 304/398 (76%), Positives = 348/398 (87%), Gaps = 1/398 (0%) Query: 1 MKLENPAPLQWQFSQRAEAMKSSAIREILKVTMRPDITSFAGGLPSPLTFPVEHMKTAFD 60 MK+ENP P++WQF+QRAE ++SS IREILK+TMRPDI SFAGGLPSP TFPVEHMK AFD Sbjct: 1 MKIENPTPIKWQFAQRAEQLQSSVIREILKITMRPDIISFAGGLPSPETFPVEHMKAAFD 60 Query: 61 RVLSQQGKMALQYGPTDGYLPLREWIAASLSTDGAQITAEQVLMVSGSQQGLDLLGKVMI 120 VLSQQGK+ALQYGP+DGY PLREWIA SLS G IT +QVLMVSGSQQ LDLLGKV+I Sbjct: 61 TVLSQQGKIALQYGPSDGYAPLREWIADSLSIPGVTITPDQVLMVSGSQQALDLLGKVLI 120 Query: 121 DEGSKVLVETPSYLGALQAFSLYGAKFESVPSDEFGLQPETIEAIAGGARMLYSLPNFQN 180 +E SKVLVETPSYLGALQAFS+Y +F S+P+D+FGL PE + IA GAR+LY+LPNFQN Sbjct: 121 EEHSKVLVETPSYLGALQAFSVYQPEFVSIPTDDFGLLPEEVAKIADGARLLYALPNFQN 180 Query: 181 PTGRTLPTERRFKLVETCARLGLPLIEDDPYGALSYQNAPLPKMLSMNPSGVIYMGSFSK 240 PTGRT+ ERRF LVETCARLGLPLIEDDPYGALSY+ PLPKML+MNP+GVIY+GSFSK Sbjct: 181 PTGRTMSVERRFALVETCARLGLPLIEDDPYGALSYRGEPLPKMLTMNPNGVIYLGSFSK 240 Query: 241 VLTPGIRLGYVVAPRPLILKMEQAKQATDLHTAQLTQMVVYEAIKDGFLDQHVPTIRKLY 300 VLTPGIRLGYVVAP PL+ K+EQAKQA DLHT+QLTQMVVYEAIKDGFL++H+P+IR LY Sbjct: 241 VLTPGIRLGYVVAPVPLVRKLEQAKQAADLHTSQLTQMVVYEAIKDGFLEKHIPSIRTLY 300 Query: 301 GDQCQAMLDALQQYFPASCSWSKPEGGMFIWVTLPEHLDASALLNEAVEQEKVAFVPGAP 360 +QCQ MLDAL ++FPA +W+KPEGGMFIWVTLPEH+D LL E++ Q VAFVPGAP Sbjct: 301 ANQCQVMLDALTEFFPAGVTWNKPEGGMFIWVTLPEHIDCMKLLEESITQ-NVAFVPGAP 359 Query: 361 FYANVAQKNTLRLSFVTVPPEQIRAGVERLGKLIASKL 398 FYAN QKNTLRLSFVTVPPE+IR GV +L KLIA+K+ Sbjct: 360 FYANEPQKNTLRLSFVTVPPEKIREGVAKLAKLIAAKI 397 >ref|YP_001352392.1| transcriptional regulator [Janthinobacterium sp. Marseille] gb|ABR89481.1| transcriptional regulator [Janthinobacterium sp. Marseille] Length = 397 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 299/398 (75%), Positives = 343/398 (86%), Gaps = 1/398 (0%) Query: 1 MKLENPAPLQWQFSQRAEAMKSSAIREILKVTMRPDITSFAGGLPSPLTFPVEHMKTAFD 60 MK+E+P P+ WQF++RAE ++SS IREILK+TMRPDI SFAGGLPSP TFPVEHMK AFD Sbjct: 1 MKIEHPTPINWQFAKRAEQLQSSVIREILKITMRPDIISFAGGLPSPETFPVEHMKAAFD 60 Query: 61 RVLSQQGKMALQYGPTDGYLPLREWIAASLSTDGAQITAEQVLMVSGSQQGLDLLGKVMI 120 VLS+QGK+ALQYGP+DGY PLREWIA SLS +GA IT +QVLMVSGSQQ LDLLGKV+I Sbjct: 61 NVLSRQGKIALQYGPSDGYAPLREWIADSLSIEGATITPDQVLMVSGSQQALDLLGKVLI 120 Query: 121 DEGSKVLVETPSYLGALQAFSLYGAKFESVPSDEFGLQPETIEAIAGGARMLYSLPNFQN 180 +E SKVLVETPSYLGALQAFS+Y +F SVP+D++GL PE ++ IA GAR+LY+LPNF N Sbjct: 121 EENSKVLVETPSYLGALQAFSVYQPQFVSVPTDDYGLLPEAVDGIADGARLLYALPNFHN 180 Query: 181 PTGRTLPTERRFKLVETCARLGLPLIEDDPYGALSYQNAPLPKMLSMNPSGVIYMGSFSK 240 PTGRT+ ERR LVETCAR GLPLIEDDPYGALSY+ PLPKML+MNPSGVIYMGSFSK Sbjct: 181 PTGRTMSVERRIALVETCARRGLPLIEDDPYGALSYRAEPLPKMLTMNPSGVIYMGSFSK 240 Query: 241 VLTPGIRLGYVVAPRPLILKMEQAKQATDLHTAQLTQMVVYEAIKDGFLDQHVPTIRKLY 300 VLTPGIRLGYVV P PLI K+EQAKQA DLHT+QLTQMVVYEAIKDGFL +H+P+IR LY Sbjct: 241 VLTPGIRLGYVVGPTPLIRKLEQAKQAADLHTSQLTQMVVYEAIKDGFLAEHIPSIRTLY 300 Query: 301 GDQCQAMLDALQQYFPASCSWSKPEGGMFIWVTLPEHLDASALLNEAVEQEKVAFVPGAP 360 +QCQ MLDAL ++ P W+KPEGGMFIWVTLP+H+D LL EA+ Q KVAFVPGAP Sbjct: 301 ANQCQVMLDALAEFAPEGVKWNKPEGGMFIWVTLPKHIDCMQLLEEAIAQ-KVAFVPGAP 359 Query: 361 FYANVAQKNTLRLSFVTVPPEQIRAGVERLGKLIASKL 398 FYAN +KNTLRLSFVTVPPE+IR GV +L KLIA+K+ Sbjct: 360 FYANEPEKNTLRLSFVTVPPEKIREGVSKLAKLIAAKI 397 >ref|ZP_08275996.1| putative aminotransferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30532.1| putative aminotransferase [Oxalobacteraceae bacterium IMCC9480] Length = 397 Score = 554 bits (1428), Expect = e-156, Method: Composition-based stats. Identities = 275/397 (69%), Positives = 326/397 (82%), Gaps = 1/397 (0%) Query: 1 MKLENPAPLQWQFSQRAEAMKSSAIREILKVTMRPDITSFAGGLPSPLTFPVEHMKTAFD 60 M E + WQF++RA ++ S IREILK+ +RP++ SFAGGLPSP TFPV M+ AFD Sbjct: 1 MPTEKIPAIAWQFAERARRLQGSVIREILKIAVRPEVISFAGGLPSPDTFPVARMQAAFD 60 Query: 61 RVLSQQGKMALQYGPTDGYLPLREWIAASLSTDGAQITAEQVLMVSGSQQGLDLLGKVMI 120 +VLS G++ALQYGPTDGYLPLREW+A SLS G I EQVLM SGSQQ LDL+GKV+I Sbjct: 61 KVLSASGRIALQYGPTDGYLPLREWVANSLSIPGTTIAPEQVLMTSGSQQALDLIGKVLI 120 Query: 121 DEGSKVLVETPSYLGALQAFSLYGAKFESVPSDEFGLQPETIEAIAGGARMLYSLPNFQN 180 DEGSKVLVETPSYLGALQAFS+YG +F S+P DE GL PE + ++ GAR+LY+LPNFQN Sbjct: 121 DEGSKVLVETPSYLGALQAFSVYGPEFVSLPGDEGGLLPEAVASVGAGARLLYALPNFQN 180 Query: 181 PTGRTLPTERRFKLVETCARLGLPLIEDDPYGALSYQNAPLPKMLSMNPSGVIYMGSFSK 240 PTGRTL ERR LV+TCARLGLPLIEDDPYGALSY+ APLPKML+M+P GV+YMGSFSK Sbjct: 181 PTGRTLSLERRLALVDTCARLGLPLIEDDPYGALSYRAAPLPKMLTMHPDGVVYMGSFSK 240 Query: 241 VLTPGIRLGYVVAPRPLILKMEQAKQATDLHTAQLTQMVVYEAIKDGFLDQHVPTIRKLY 300 LTPGIRLGYVVAP PL+ K+E AKQA DLHTA LTQMVVYE +KDGFLD H+PTIR LY Sbjct: 241 TLTPGIRLGYVVAPLPLVRKLELAKQAADLHTATLTQMVVYEVVKDGFLDTHIPTIRALY 300 Query: 301 GDQCQAMLDALQQYFPASCSWSKPEGGMFIWVTLPEHLDASALLNEAVEQEKVAFVPGAP 360 ++C ML AL +FPA +W++PEGGMFIWVTLP H+D++ LL++A+ Q VAFVPGAP Sbjct: 301 AERCATMLAALTSFFPAGVTWTQPEGGMFIWVTLPAHIDSTQLLDQAIAQ-NVAFVPGAP 359 Query: 361 FYANVAQKNTLRLSFVTVPPEQIRAGVERLGKLIASK 397 FYA +NTLRLSFVTV PE+IR G+E+LGKLIA++ Sbjct: 360 FYATNPVRNTLRLSFVTVTPERIREGIEKLGKLIAAQ 396