BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2203.p (567 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775224.1| ABC-type bacteriocin/lantibiotic ATPase/perm... 908 0.0 ref|YP_001353080.1| ABC transporter, ATP-binding/permease fusion... 679 0.0 ref|YP_001100203.1| putative transporter with ATPase [Herminiimo... 652 0.0 ref|YP_546546.1| ABC transporter related [Methylobacillus flagel... 333 3e-89 ref|YP_003051753.1| ABC transporter-like protein [Methylovorus g... 331 2e-88 >ref|YP_003775224.1| ABC-type bacteriocin/lantibiotic ATPase/permease fusion exporter protein [Herbaspirillum seropedicae SmR1] gb|ADJ63316.1| ABC-type bacteriocin/lantibiotic ATPase/permease fusion exporter protein [Herbaspirillum seropedicae SmR1] Length = 567 Score = 908 bits (2347), Expect = 0.0, Method: Composition-based stats. Identities = 517/567 (91%), Positives = 543/567 (95%) Query: 1 MNASEQVHIDQPQVRTDLRADPTYLTLLRAYGSRFVEIIVAGILVNLLGLLMPLYSRLIY 60 MNASEQVHIDQPQV DLRADP+YL+LLRAYGSRFVEIIVAGI+VN+LGLLMPLYSRLIY Sbjct: 1 MNASEQVHIDQPQVLQDLRADPSYLSLLRAYGSRFVEIIVAGIVVNVLGLLMPLYSRLIY 60 Query: 61 DKVLGNHIPETLWALTLGMLLFIGLELVLRIIRVYYTEQLAGRLDGEFDEVSARRLLTAK 120 DKV+GNHIPETLWALTLGMLLF+ LELVLRIIRVYYTEQLAGRLD EFDEVSARR+LTA+ Sbjct: 61 DKVIGNHIPETLWALTLGMLLFVALELVLRIIRVYYTEQLAGRLDSEFDEVSARRMLTAR 120 Query: 121 VQAPVGVVLARYRDLSAARDLLSSNYMLLLVDLPFLALYLVVLGLIGGHMVWVLLVGGAL 180 VQAPVGVVLARYRDLSAARDL+SSNYMLLLVDLPFL LYLVVLGLIGGHMVWVLLVGG L Sbjct: 121 VQAPVGVVLARYRDLSAARDLMSSNYMLLLVDLPFLLLYLVVLGLIGGHMVWVLLVGGGL 180 Query: 181 LVGMQLLLKVPANDYAHAAMKAGTGKVDKLASIVYGMETLKTTPLQDRLMRAFLADAGAN 240 LVG+QLLLKVP NDYA++AMKAGTGKVDKLASIVYGMETLKT+PLQ RL+RAFLADA AN Sbjct: 181 LVGLQLLLKVPGNDYANSAMKAGTGKVDKLASIVYGMETLKTSPLQHRLLRAFLADASAN 240 Query: 241 AVAQAKSRFWMNTSYAISTVGYTFIAVATLVVGVYLVEDNLLTVGALIACSLLISRATTV 300 AVAQAKSRFWMNTSYAIS+VGYT I+VATLVVGVYLVEDNLLTVGALIACSLLISRA TV Sbjct: 241 AVAQAKSRFWMNTSYAISSVGYTLISVATLVVGVYLVEDNLLTVGALIACSLLISRAATV 300 Query: 301 LSSLAALLGRIEMFRRARAEFDQLFEEQKETPTADVLRQEMRGLIQVGNLLLHLDQKENA 360 LSSLAA LGRIEMFRRARAEFDQLFEE ++ PTADVLRQ+MRGLIQVGNLLLHLD+KE Sbjct: 301 LSSLAAFLGRIEMFRRARAEFDQLFEEPEQGPTADVLRQDMRGLIQVGNLLLHLDKKETP 360 Query: 361 TLKNISLTIQPGEKVGLVGRSGSGKSTLLRALAGLHQPDEGHVLIDGVAVTAYAPEVRMR 420 TL+NISLTIQPGEKVG+VGRSGSGKSTLLR LAGLHQ +EGHVLIDGVAVTAYA EVRMR Sbjct: 361 TLRNISLTIQPGEKVGIVGRSGSGKSTLLRTLAGLHQAEEGHVLIDGVAVTAYAEEVRMR 420 Query: 421 CIGFKPQEPFLFDGTVAANIFVGDRVPGQVYEAALAVSSLDDLIARGELRLDQAIKAPGN 480 CIGFKPQEPFLFDGTVAANIFVGDRVPGQVYEAALAVSSLDDLIARGELRLDQ IKAPGN Sbjct: 421 CIGFKPQEPFLFDGTVAANIFVGDRVPGQVYEAALAVSSLDDLIARGELRLDQLIKAPGN 480 Query: 481 LSGGQRQMVALARVIACTPRILLLDEPTTGVDQQTEARIIERLAAYAGPRTLVVATHSPA 540 LSGGQRQMVALARVIACTPRILLLDEPTTG+DQQTEARIIERL YAG RTLVVATHSPA Sbjct: 481 LSGGQRQMVALARVIACTPRILLLDEPTTGIDQQTEARIIERLVGYAGGRTLVVATHSPA 540 Query: 541 LLRHVDRIIVIDGGRIVADGPRDQILQ 567 LLRH+DRI+VIDGGRIVADGPR QILQ Sbjct: 541 LLRHMDRIVVIDGGRIVADGPRAQILQ 567 >ref|YP_001353080.1| ABC transporter, ATP-binding/permease fusion protein, type I secretion pathway [Janthinobacterium sp. Marseille] gb|ABR90734.1| ABC transporter, ATP-binding/permease fusion protein, type I secretion pathway [Janthinobacterium sp. Marseille] Length = 585 Score = 679 bits (1752), Expect = 0.0, Method: Composition-based stats. Identities = 351/552 (63%), Positives = 435/552 (78%), Gaps = 1/552 (0%) Query: 17 DLRADPTYLTLLRAYGSRFVEIIVAGILVNLLGLLMPLYSRLIYDKVLGNHIPETLWALT 76 ++ DP Y+T+LRAYG R VEI+VAG L+N+ GLL+P+YSRL+YDKV+GNHIP+TLWALT Sbjct: 34 EITRDPMYVTMLRAYGKRMVEIVVAGFLINVFGLLLPVYSRLVYDKVIGNHIPDTLWALT 93 Query: 77 LGMLLFIGLELVLRIIRVYYTEQLAGRLDGEFDEVSARRLLTAKVQAPVGVVLARYRDLS 136 LGMLLF+ LE VLR+IR +Y EQLAG+ D +FD+ ++LL A+V PVGVVLA+YRD++ Sbjct: 94 LGMLLFLALEFVLRVIRTFYIEQLAGKFDIDFDQAVVKKLLAARVSWPVGVVLAKYRDIT 153 Query: 137 AARDLLSSNYMLLLVDLPFLALYLVVLGLIGGHMVWVLLVGGALLVGMQLLLKVPANDYA 196 +ARDLLSSNYML+++D PFL LYL+ +GLIGG +VWV+LVGG LLVG QLL K+PANDYA Sbjct: 154 SARDLLSSNYMLVIIDFPFLLLYLLAIGLIGGPIVWVVLVGGTLLVGAQLLCKIPANDYA 213 Query: 197 HAAMKAGTGKVDKLASIVYGMETLKTTPLQDRLMRAFLADAGANAVAQAKSRFWMNTSYA 256 AM G K +KLA +VYG+ETLKT+ LQ R++ F DA + QAKSRFW + + Sbjct: 214 STAMTIGATKTNKLAGLVYGIETLKTSALQKRVLELFAKDAEDAGITQAKSRFWSSVGFT 273 Query: 257 ISTVGYTFIAVATLVVGVYLVEDNLLTVGALIACSLLISRATTVLSSLAALLGRIEMFRR 316 IS+ GYT + VATLVVGVY+VE N LTVGALIA S+L+ RA ++LSS+A +LGRI+ F++ Sbjct: 274 ISSSGYTLMTVATLVVGVYMVEANALTVGALIASSMLVGRAASMLSSVAMVLGRIDAFKQ 333 Query: 317 ARAEFDQLF-EEQKETPTADVLRQEMRGLIQVGNLLLHLDQKENATLKNISLTIQPGEKV 375 AR F++LF E T +V RQ++ G IQV NL + E A LK IS I PGEK+ Sbjct: 334 ARTSFEELFIEAPNAQVTNEVDRQQIDGKIQVANLSFSIKPDEPAMLKQISFVINPGEKI 393 Query: 376 GLVGRSGSGKSTLLRALAGLHQPDEGHVLIDGVAVTAYAPEVRMRCIGFKPQEPFLFDGT 435 GLVGRSGSGKSTLLR LAG+H PD G VL+DG+AV AY EVRMR I +KPQ+PFLFDGT Sbjct: 394 GLVGRSGSGKSTLLRCLAGVHAPDTGQVLMDGIAVAAYPQEVRMRSIAYKPQDPFLFDGT 453 Query: 436 VAANIFVGDRVPGQVYEAALAVSSLDDLIARGELRLDQAIKAPGNLSGGQRQMVALARVI 495 +A+NIFV + + +Y+ AL VS +D+L+A G+LRLDQ + APGNLSGGQRQMVALAR I Sbjct: 454 LASNIFVDNAISTSIYQTALHVSCMDELLAGGQLRLDQLLVAPGNLSGGQRQMVALARAI 513 Query: 496 ACTPRILLLDEPTTGVDQQTEARIIERLAAYAGPRTLVVATHSPALLRHVDRIIVIDGGR 555 ACTP +LLLDEPTTG+DQ TE +IIERL A+A RTLVVATHSP LL+ +DRIIVI G+ Sbjct: 514 ACTPNVLLLDEPTTGIDQGTENKIIERLVAFAATRTLVVATHSPVLLKQMDRIIVIHDGK 573 Query: 556 IVADGPRDQILQ 567 IVADGPR QILQ Sbjct: 574 IVADGPRAQILQ 585 >ref|YP_001100203.1| putative transporter with ATPase [Herminiimonas arsenicoxydans] emb|CAL62079.1| putative ABC transporter, xenobiotic ATPase [Herminiimonas arsenicoxydans] Length = 585 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 350/552 (63%), Positives = 435/552 (78%), Gaps = 1/552 (0%) Query: 17 DLRADPTYLTLLRAYGSRFVEIIVAGILVNLLGLLMPLYSRLIYDKVLGNHIPETLWALT 76 ++ DP Y+T+LRAYG R VEI+VAG L+N+ GLL+P+YSRL+YDKV+GNHIP+TLWALT Sbjct: 34 EITRDPMYVTMLRAYGKRLVEIVVAGFLINVFGLLLPIYSRLVYDKVIGNHIPDTLWALT 93 Query: 77 LGMLLFIGLELVLRIIRVYYTEQLAGRLDGEFDEVSARRLLTAKVQAPVGVVLARYRDLS 136 LGMLLF+ LE VLR+IR +Y EQLAG+ D +FD ++LL A+V PVGVVLA+YRD++ Sbjct: 94 LGMLLFLALEFVLRVIRTFYVEQLAGKFDIDFDLAVVKKLLAARVSWPVGVVLAKYRDIT 153 Query: 137 AARDLLSSNYMLLLVDLPFLALYLVVLGLIGGHMVWVLLVGGALLVGMQLLLKVPANDYA 196 +ARDLLSSNYML+++D PFL LYL+ +GLIGG ++WV+LVGG LLVG QLL K+PANDYA Sbjct: 154 SARDLLSSNYMLVIIDFPFLLLYLLAIGLIGGPILWVVLVGGGLLVGAQLLCKIPANDYA 213 Query: 197 HAAMKAGTGKVDKLASIVYGMETLKTTPLQDRLMRAFLADAGANAVAQAKSRFWMNTSYA 256 AM G K DKLA +V+G+ETLKT+ LQ R+ F DA + V QAK RFW + Y Sbjct: 214 RVAMTVGATKTDKLAGLVFGIETLKTSALQKRVFDLFSRDAEVSGVTQAKGRFWASVGYT 273 Query: 257 ISTVGYTFIAVATLVVGVYLVEDNLLTVGALIACSLLISRATTVLSSLAALLGRIEMFRR 316 IS+ GYT + VATLVVGVY+VE N LTVGALIA S+L+ RA ++LSS+A +LGRI+ F++ Sbjct: 274 ISSSGYTLMTVATLVVGVYMVEANALTVGALIASSMLVGRAASMLSSVAMVLGRIDTFKQ 333 Query: 317 ARAEFDQLF-EEQKETPTADVLRQEMRGLIQVGNLLLHLDQKENATLKNISLTIQPGEKV 375 AR F++LF + Q T +V RQ++ G IQV NL + E A LK IS I PGEKV Sbjct: 334 ARTSFEELFVDTQNTNKTNEVDRQQIEGRIQVANLSFSIKPDEPAMLKQISFIINPGEKV 393 Query: 376 GLVGRSGSGKSTLLRALAGLHQPDEGHVLIDGVAVTAYAPEVRMRCIGFKPQEPFLFDGT 435 GLVGRSGSGKSTLLR LAG+H PD G VL+DG++V AY+ EVRMR I +KPQ+PFLFDGT Sbjct: 394 GLVGRSGSGKSTLLRCLAGVHAPDVGQVLMDGISVAAYSQEVRMRSIAYKPQDPFLFDGT 453 Query: 436 VAANIFVGDRVPGQVYEAALAVSSLDDLIARGELRLDQAIKAPGNLSGGQRQMVALARVI 495 +A+NIF+ + + +Y+ AL VS +D+L+A G+LRLDQ + APGNLSGGQRQMVALAR I Sbjct: 454 LASNIFIDNTISTSIYQIALHVSCMDELLAGGQLRLDQMLVAPGNLSGGQRQMVALARAI 513 Query: 496 ACTPRILLLDEPTTGVDQQTEARIIERLAAYAGPRTLVVATHSPALLRHVDRIIVIDGGR 555 A TP +LLLDEPTTGVDQ TE +IIERL A+A RTLVVATHSP LL+ +DRIIVI+ G+ Sbjct: 514 ASTPNVLLLDEPTTGVDQMTENKIIERLVAFAANRTLVVATHSPVLLKQMDRIIVINDGK 573 Query: 556 IVADGPRDQILQ 567 IVADGPR QILQ Sbjct: 574 IVADGPRAQILQ 585 >ref|YP_546546.1| ABC transporter related [Methylobacillus flagellatus KT] gb|ABE50705.1| ABC transporter related protein [Methylobacillus flagellatus KT] Length = 572 Score = 333 bits (855), Expect = 3e-89, Method: Composition-based stats. Identities = 210/552 (38%), Positives = 326/552 (59%), Gaps = 18/552 (3%) Query: 33 SRFVEIIVAGILVNLLGLLMPLYSRLIYDKVLGNHIPETLWALTLGMLLFIGLELVLRII 92 ++++E+ +A +L+N +L+PL+S L+YDK++ N + ETLWAL +GML+FI L++ +R+ Sbjct: 20 TQWLEVGLASLLINSGQILLPLFSMLVYDKIVSNGVFETLWALVIGMLIFIALDVGMRVT 79 Query: 93 RVYYTEQLAGRLDGEFDEVSARRLLTAKVQAPVGVV--LARYRDLSAARDLLSSNYMLLL 150 R + E++A + + DE +LL + GV LA YRDL+ + +SS Y+L + Sbjct: 80 RNWTVERVAADMARKTDEGLWHKLLADRDMPAGGVATFLAHYRDLTNTLNFVSSTYLLAI 139 Query: 151 VDLPFLALYLVVLGLIGGHMVWVLLVGGALLVGMQLLLKVPANDYAHAAMKAGTGKVDKL 210 DLPF LY++V+G I ++ ++ V + G+ L++ A + T ++ + Sbjct: 140 ADLPFYLLYMLVIGFIAWPIMILVGVLTLVYAGIGYLVQRQTLRLNRDAEQTSTQRMAYI 199 Query: 211 ASIVYGMETLKTTPLQDRLMRAFLADAGANAVAQAKSRFWMNTSYAISTVGYTFIAVATL 270 ++ GME ++T P L++ + + + +A R + S +S TF VA L Sbjct: 200 GEVLQGMEVVRTVPGVTGLLQGWRTQSEKVSDLEAARRLSASHSNTLSAGMMTFTTVAVL 259 Query: 271 VVGVYLVEDNLLTVGALIACSLLISRATTVLSSLAALLGRIEMFRRARAEFDQLFEE--- 327 +G YL+E +L+VG LIACSLL +RA +++SL +LG+ E F R+ D+L E Sbjct: 260 TLGAYLIEARMLSVGGLIACSLLAARAMMLVTSLYLVLGKWEDFARSAKRMDELLESGKA 319 Query: 328 --------QKETPTA--DVLRQEMRGLIQVGNLLLHLDQKENATLKNISLTIQPGEKVGL 377 ++ P A +V + E +G I + L + A L N+SLTI GEK+GL Sbjct: 320 AHGISHDIEQSAPHASFNVSKPEAKGDITLRRLTKRYPDRP-AALDNVSLTIAAGEKIGL 378 Query: 378 VGRSGSGKSTLLRALAGLHQPDEGHVLIDGVAVTAYAPEVRMRCIGFKPQEPFLFDGTVA 437 +GR G+GKSTLL+ +AGL DEG +LIDG + A +PE R R + +KPQEP LF GT+ Sbjct: 379 LGRPGAGKSTLLKLIAGLSIADEGEILIDGYELHAISPEDRARWLAYKPQEPVLFAGTLE 438 Query: 438 ANIFVGDRVP-GQVYEAALAVSSLDDLIARGELRLDQAIKAPG-NLSGGQRQMVALARVI 495 AN+ + P + E AL S L++ + +G L L AI G NLSGGQRQ VALAR Sbjct: 439 ANLLLAGSKPRSERMELALWASGLEEELKQGRLTLTMAIADRGSNLSGGQRQKVALARAF 498 Query: 496 ACTPRILLLDEPTTGVDQQTEARIIERLAAYAGPRTLVVATHSPALLRHVDRIIVIDGGR 555 A ILLLDEP+ G+D + E + +RL G L++ +HS A++ V RII +DGG+ Sbjct: 499 AQPSTILLLDEPSLGLDPEGEQLLAQRLPQVVGNGNLIMISHSAAMMTAVQRIIALDGGK 558 Query: 556 IVADGPRDQILQ 567 +VADGP++++L+ Sbjct: 559 VVADGPKEKLLR 570 >ref|YP_003051753.1| ABC transporter-like protein [Methylovorus glucosetrophus SIP3-4] gb|ACT51226.1| ABC transporter related [Methylovorus glucosetrophus SIP3-4] Length = 575 Score = 331 bits (849), Expect = 2e-88, Method: Composition-based stats. Identities = 207/548 (37%), Positives = 318/548 (58%), Gaps = 8/548 (1%) Query: 24 YLTLLRAYGSRFVEIIVAGILVNLLGLLMPLYSRLIYDKVLGNHIPETLWALTLGMLLFI 83 +L +LRA +EI ++ ++N GLLMPL+S LIYDKV+GN ETLW L GMLL + Sbjct: 26 HLQVLRAMAPYGLEIGLSSFIINACGLLMPLFSMLIYDKVVGNGNVETLWTLVAGMLLVL 85 Query: 84 GLELVLRIIRVYYTEQLAGRLDGEFDEVSARRLLTAKVQ--APVGVVLARYRDLSAARDL 141 LE LR IR Y T++L + + RLLT Q A GV+++RYRDL++ARD Sbjct: 86 VLEFTLRTIRAYVTQRLGAIAELHMEGRFIDRLLTTNAQQVASPGVLMSRYRDLASARDA 145 Query: 142 LSSNYMLLLVDLPFLALYLVVLGLIGGHMVWVLLVGGALLVGMQLLLKVPANDYAHAAMK 201 L + Y ++ D+PF+ L+L+ GLIGG +V + ++ ++ Q L P DY+ + Sbjct: 146 LLAQYAVVAADMPFMLLFLLAQGLIGGWLVLIPILFALPILLGQWLSNKPERDYSSRTLG 205 Query: 202 AGTGKVDKLASIVYGMETLKTTPLQDRLMRAFLADAGANAVAQAKSRFWMNTSYAISTVG 261 K L+ + + L+ +PL+ L + ++ A+ + + RFW A + Sbjct: 206 VAARKASLLSELAGNLAFLQISPLRHLLADRWESEMYQGAILRGRQRFWQTAGQAWVGMC 265 Query: 262 YTFIAVATLVVGVYLVEDNLLTVGALIACSLLISRATTVLSSLAALLGRIEMFRRARAEF 321 +V L VGVY +E ++VGALIACSL+ RA LSS A+LL + R +AE Sbjct: 266 IGLASVTLLAVGVYRIEAGAISVGALIACSLIQLRAMLQLSSAASLLLGWKDLNRTQAEL 325 Query: 322 DQLFEEQKETPTADVLRQEMRGLIQVGNLLLHLDQKENATLKNISLTIQPGEKVGLVGRS 381 D + + + +G I V L H +Q + L +++L + PGE++ ++GR Sbjct: 326 DAAAQPEANASYIQMPIASGKGDISVTQLTCH-NQDGDLILDHVNLAVAPGERIAVIGRP 384 Query: 382 GSGKSTLLRALAGLHQPDEGHVLIDGVAVTAYAPEVRMRCIGFKPQEPFLFDGTVAANIF 441 GSGKSTLLR LAG+ P EG +L++ + V AY+P+ R I +KPQEP+L + N+ Sbjct: 385 GSGKSTLLRCLAGVQAPSEGQILLNAMRVEAYSPDQRALAITYKPQEPYLLGPCLQDNL- 443 Query: 442 VGDRVPGQVYEAALAVSSLDDLIARGELRLDQAIKAPGN--LSGGQRQMVALARVIACTP 499 R+ E A+ ++ L + GELR DQ + A LS GQ Q+VALAR ++ P Sbjct: 444 --ARMESLRAEQAMLLTGLAAALKSGELRRDQVVSAGTGPRLSAGQCQIVALARSLSEDP 501 Query: 500 RILLLDEPTTGVDQQTEARIIERLAAYAGPRTLVVATHSPALLRHVDRIIVIDGGRIVAD 559 ++ LLDEPT GVD +TEA++++ + +T+++ATHS ALL+ +DRI+V++ G++VA Sbjct: 502 QVFLLDEPTAGVDGETEAKLVDAVDQLTRGKTVILATHSLALLKKMDRIVVLERGKVVAS 561 Query: 560 GPRDQILQ 567 G +++LQ Sbjct: 562 GTPERLLQ 569