BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2196.p (457 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775222.1| Type I antifreeze protein:HlyD family secret... 668 0.0 ref|YP_001353078.1| HlyD family secretion protein [Janthinobacte... 509 e-142 ref|YP_001100205.1| putative Type I secretion membrane fusion pr... 503 e-140 ref|YP_003051756.1| HlyD family type I secretion membrane fusion... 349 6e-94 ref|YP_004040398.1| HlyD family type I secretion membrane fusion... 348 2e-93 >ref|YP_003775222.1| Type I antifreeze protein:HlyD family secretion protein [Herbaspirillum seropedicae SmR1] gb|ADJ63314.1| Type I antifreeze protein:HlyD family secretion protein [Herbaspirillum seropedicae SmR1] Length = 457 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 405/457 (88%), Positives = 434/457 (94%) Query: 1 MTLSLKPGTGHGISSRGKGFMRRVAPRLDRRLGELQAMPRPRLAVLACTLLLALLVLWSM 60 MTLSLKP GI +RG+GFMRR+APRLDRRLGEL MPRPRLAVLA T+LLALLVLWS+ Sbjct: 1 MTLSLKPNATPGIGARGQGFMRRLAPRLDRRLGELATMPRPRLAVLAVTVLLALLVLWSV 60 Query: 61 LAPIDMVVRGSGRIVASEHNQVIQHLEGGIVSAILVREGAVVRKGQTLISIADVRANADL 120 APIDMVVRGSGRIVASEHNQVIQHLEGGIVSAILVREGA V+KGQTLISI+DVRANADL Sbjct: 61 FAPIDMVVRGSGRIVASEHNQVIQHLEGGIVSAILVREGAAVKKGQTLISISDVRANADL 120 Query: 121 GEGRVKILGLRAKIARLSAEAAGAASLQMPADLDHDDPAVQSEQAAFAARSAKLMQEMSV 180 GEGRVKILGLRAKIARLSAEA+GA+SLQMP DL+ DPAVQSEQAAFAARS+KLMQEMSV Sbjct: 121 GEGRVKILGLRAKIARLSAEASGASSLQMPDDLERGDPAVQSEQAAFAARSSKLMQEMSV 180 Query: 181 LREQAAQRQAELGEAVSRQKSQASELDLAQRQYKLIHNMLERNAASQLEDIQAAARVQDA 240 LREQ+AQRQAELGEA+SRQKSQASEL+LAQRQYKLIH+ML RNAASQLEDIQAA+RVQDA Sbjct: 181 LREQSAQRQAELGEAISRQKSQASELELAQRQYKLIHDMLVRNAASQLEDIQAASRVQDA 240 Query: 241 QSKLSANDAMIPRLKAAIAESQAKMGEASSRFRSDARAELTAAETELARLQEEIKSRNDR 300 QSKL+A +AMIPRL AAIAE+QAK GEA+SRFRSDAR ELTAAETELARLQEEIKSRNDR Sbjct: 241 QSKLAATNAMIPRLNAAIAEAQAKQGEAASRFRSDARTELTAAETELARLQEEIKSRNDR 300 Query: 301 VSRSEVKAPMDGVVNRVMINTVGGVVRPGDPIIEMTPSDDKLVIEARISPTDRAELATGA 360 VSRSEVKAPMDGVVNRVMINT+GGVVRPGDPIIEMTPSDDKLVIEARISPTDRAEL TGA Sbjct: 301 VSRSEVKAPMDGVVNRVMINTIGGVVRPGDPIIEMTPSDDKLVIEARISPTDRAELVTGA 360 Query: 361 KARVKVSAYDYGVYGAMEGVVTEISADTVPDENNPRGERSYRIKIAVQRGDNDLQRKLAL 420 +ARVKVSAYDYGVYGAM+GVVTEISADTVPDE +PRGER YR+KI V+RG ++LQ+KLAL Sbjct: 361 RARVKVSAYDYGVYGAMDGVVTEISADTVPDEGSPRGERFYRLKIEVKRGHDELQQKLAL 420 Query: 421 MPGMTASADIIVGRRTVWQYLMSPLSRFGQGALREPR 457 MPGMTASADIIVGRRTVWQYLMSPLSRFGQGALREPR Sbjct: 421 MPGMTASADIIVGRRTVWQYLMSPLSRFGQGALREPR 457 >ref|YP_001353078.1| HlyD family secretion protein [Janthinobacterium sp. Marseille] gb|ABR90740.1| HlyD family secretion protein, type I secretion pathway [Janthinobacterium sp. Marseille] Length = 457 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 297/445 (66%), Positives = 359/445 (80%), Gaps = 7/445 (1%) Query: 16 RGKGFMRRVAPRLDRRLGELQAMPRPRLAVLACTLLLALLVLWSMLAPIDMVVRGSGRIV 75 R + R+ P LDR + + MP P++ VLA L LLV+W+ LAPIDMVVRG GRIV Sbjct: 17 RVEASTRKAVPALDRGIDAYREMPGPKVFVLALLAGLLLLVIWAYLAPIDMVVRGQGRIV 76 Query: 76 ASEHNQVIQHLEGGIVSAILVREGAVVRKGQTLISIADVRANADLGEGRVKILGLRAKIA 135 S+HNQ+IQHLEGGIVSAI+VREGA VRK Q LI+I DVRA++D GEGRVK+LGLRA++A Sbjct: 77 PSDHNQIIQHLEGGIVSAIVVREGAAVRKDQVLITIRDVRASSDQGEGRVKLLGLRARVA 136 Query: 136 RLSAEAAGAASLQMPADLDHDDPAVQSEQAAFAARSAKLMQEMSVLREQAAQRQAELGEA 195 RL+AEA GA L +PAD+ DPA QSEQAAFAAR AKL E+S+LREQ QRQAEL E Sbjct: 137 RLTAEAGGATQLNLPADM-LADPAGQSEQAAFAARQAKLNGELSILREQTTQRQAELNET 195 Query: 196 VSRQKSQASELDLAQRQYKLIHNMLERNAASQLEDIQAAARVQDAQSKLSANDAMIPRLK 255 +SRQKS E L Q+QY+L+H+M ++AASQLEDIQA +R QD +S+LSA +MIPRL+ Sbjct: 196 ISRQKSLTDEYALVQQQYQLVHSMYLKSAASQLEDIQAQSRAQDVRSRLSAASSMIPRLR 255 Query: 256 AAIAESQAKMGEASSRFRSDARAELTAAETELARLQEEIKSRNDRVSRSEVKAPMDGVVN 315 AAI+E+QAK+ + SRFR++ARA+LT AETELARL EE+KSRNDRV RSEVKAPMDGVVN Sbjct: 256 AAISEAQAKVTDGVSRFRAEARADLTTAETELARLSEEMKSRNDRVLRSEVKAPMDGVVN 315 Query: 316 RVMINTVGGVVRPGDPIIEMTPSDDKLVIEARISPTDRAELATGAKARVKVSAYDYGVYG 375 R+ +NTVGGVV+PGDPI+EMTP DDK+V+EA I+PTDRAELA G ARVKV+AYDYGV+G Sbjct: 316 RIFVNTVGGVVKPGDPILEMTPIDDKVVVEANINPTDRAELAIGKPARVKVTAYDYGVFG 375 Query: 376 AMEGVVTEISADTVPDENNPRGERSYRIKIAVQRGDNDLQ---RKLALMPGMTASADIIV 432 +M+G VTEISADTVP+E +GER YR+KI V R ++ L LMPGMTA+ADI+V Sbjct: 376 SMQGKVTEISADTVPEE---KGERHYRVKIEVTRDPEQIKSAGNSLPLMPGMTATADIVV 432 Query: 433 GRRTVWQYLMSPLSRFGQGALREPR 457 GRRTVWQYLMSP++RF Q ALREPR Sbjct: 433 GRRTVWQYLMSPINRFTQSALREPR 457 >ref|YP_001100205.1| putative Type I secretion membrane fusion protein, HlyD [Herminiimonas arsenicoxydans] emb|CAL62081.1| Putative type I secretion membrane fusion protein, HlyD [Herminiimonas arsenicoxydans] Length = 456 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 294/439 (66%), Positives = 356/439 (81%), Gaps = 7/439 (1%) Query: 22 RRVAPRLDRRLGELQAMPRPRLAVLACTLLLALLVLWSMLAPIDMVVRGSGRIVASEHNQ 81 R+ P LDR + + MP P+L VLA + L LLV+W+ APIDMVVRG GRIV S+HNQ Sbjct: 22 RKAVPVLDRGIESYREMPGPKLFVLALLIGLLLLVIWAYFAPIDMVVRGQGRIVPSDHNQ 81 Query: 82 VIQHLEGGIVSAILVREGAVVRKGQTLISIADVRANADLGEGRVKILGLRAKIARLSAEA 141 +IQHLEGGIVSAI+VREGA VRK Q LI+I DVRA++D GEGR+K+LGLRA++ARL+AEA Sbjct: 82 IIQHLEGGIVSAIVVREGAAVRKEQVLITIRDVRASSDQGEGRIKLLGLRARVARLTAEA 141 Query: 142 AGAASLQMPADLDHDDPAVQSEQAAFAARSAKLMQEMSVLREQAAQRQAELGEAVSRQKS 201 +GAA L +PAD+ D QSEQAAFAAR AKL E+S+LREQ QRQAEL E +SRQKS Sbjct: 142 SGAAQLNLPADMLADLTG-QSEQAAFAARQAKLNGELSILREQMTQRQAELNETISRQKS 200 Query: 202 QASELDLAQRQYKLIHNMLERNAASQLEDIQAAARVQDAQSKLSANDAMIPRLKAAIAES 261 E L Q+QY+L+H M ++AASQLEDIQA +R QD +S+L+A +MIPRL+AAI+E+ Sbjct: 201 LTDEYALVQQQYQLVHAMYLKSAASQLEDIQAQSRAQDVRSRLNAASSMIPRLRAAISEA 260 Query: 262 QAKMGEASSRFRSDARAELTAAETELARLQEEIKSRNDRVSRSEVKAPMDGVVNRVMINT 321 QAK+ + SRFR++ARA+LT AETELARL EE+KSRNDRV RSEVKAPMDGVVNR+ +NT Sbjct: 261 QAKVTDGVSRFRAEARADLTTAETELARLSEEMKSRNDRVLRSEVKAPMDGVVNRIFVNT 320 Query: 322 VGGVVRPGDPIIEMTPSDDKLVIEARISPTDRAELATGAKARVKVSAYDYGVYGAMEGVV 381 VGGVV+PGDPI+EMTP DDK+V+EA I+PTDRAELA G ARVKV+AYDYGV+G+M+G V Sbjct: 321 VGGVVKPGDPILEMTPIDDKVVVEANINPTDRAELAIGKPARVKVTAYDYGVFGSMQGRV 380 Query: 382 TEISADTVPDENNPRGERSYRIKIAVQRGDNDLQRK---LALMPGMTASADIIVGRRTVW 438 TEISADTVP+E RGER YR+KI V R ++ L LMPGMTA+ADI+VGRRTVW Sbjct: 381 TEISADTVPEE---RGERHYRVKIEVTRDPEQIKSAGNGLPLMPGMTATADIVVGRRTVW 437 Query: 439 QYLMSPLSRFGQGALREPR 457 QYLMSP++RF Q ALREPR Sbjct: 438 QYLMSPINRFTQTALREPR 456 >ref|YP_003051756.1| HlyD family type I secretion membrane fusion protein [Methylovorus glucosetrophus SIP3-4] gb|ACT51229.1| type I secretion membrane fusion protein, HlyD family [Methylovorus glucosetrophus SIP3-4] Length = 439 Score = 349 bits (896), Expect = 6e-94, Method: Composition-based stats. Identities = 208/436 (47%), Positives = 310/436 (71%), Gaps = 6/436 (1%) Query: 22 RRVAPRLDRRLGELQAMPRPRLAVLACTLLLALLVLWSMLAPIDMVVRGSGRIVASEHNQ 81 +R+A R ++ LQ + PR V+ T+++ LL++W+ AP+ MVVR GR++ S H+Q Sbjct: 10 QRLANRHRQQADLLQELRTPRHWVVLITVMVVLLIVWAAWAPVRMVVRAEGRVIPSTHSQ 69 Query: 82 VIQHLEGGIVSAILVREGAVVRKGQTLISIADVRANADLGEGRVKILGLRAKIARLSAEA 141 V+QHLEGG+V +I V EG V+KG L I+DV+ + +GE RV+ L A++ RL AEA Sbjct: 70 VVQHLEGGVVLSIDVAEGEFVQKGDVLARISDVQGASQMGERRVREQALLARVLRLKAEA 129 Query: 142 AGAASLQMPADLDHDDPAVQSEQAAFAARSAKLMQEMSVLREQAAQRQAELGEAVSRQKS 201 +G+A A LD D A+++E+ AF AR +L Q+ V EQ AQ+++EL E ++R+ + Sbjct: 130 SGSAIADFHA-LDASD-AIRAEREAFLARRQRLEQDQRVTTEQVAQKRSELAELMARRSN 187 Query: 202 QASELDLAQRQYKLIHNMLERNAASQLEDIQAAARVQDAQSKLSANDAMIPRLKAAIAES 261 A+EL+LAQRQ ++ + M++R AAS+LE + A A+VQ ++ LS D +PRLKAAIAE+ Sbjct: 188 LAAELELAQRQQQISNEMMQREAASKLEVLDAQAKVQRLRTMLSDADTSLPRLKAAIAEA 247 Query: 262 QAKMGEASSRFRSDARAELTAAETELARLQEEIKSRNDRVSRSEVKAPMDGVVNRVMINT 321 + + E SRFR++AR +LTAA+T+L R+QEE+K+ +DRV R+E++AP+ G+VNRV + T Sbjct: 248 EGRSRELESRFRAEARTDLTAAQTDLQRVQEELKASSDRVERTELRAPVSGIVNRVNVTT 307 Query: 322 VGGVVRPGDPIIEMTPSDDKLVIEARISPTDRAELATGAKARVKVSAYDYGVYGAMEGVV 381 +GGV+RPGD ++E+TPSD+ +V+EAR+ P DRAEL G V++SAYDY +G +G + Sbjct: 308 IGGVIRPGDAVVEITPSDEHIVVEARVRPADRAELHPGLPVYVRLSAYDYASFGTTQGRL 367 Query: 382 TEISADTVPDENNPRGERSYRIKIAVQRGDNDLQRKLALMPGMTASADIIVGRRTVWQYL 441 TE+SADT+PDE +GER YR+++ + G+ ++PGM A+ADI+VG RTV YL Sbjct: 368 TEVSADTMPDE---KGERFYRVRVGLD-GNQRAFAGRPIVPGMVATADIVVGSRTVLAYL 423 Query: 442 MSPLSRFGQGALREPR 457 +SPL+RF + AL EPR Sbjct: 424 ISPLTRFARAALSEPR 439 >ref|YP_004040398.1| HlyD family type I secretion membrane fusion protein [Methylovorus sp. MP688] gb|ADQ85162.1| type I secretion membrane fusion protein, HlyD family [Methylovorus sp. MP688] Length = 439 Score = 348 bits (892), Expect = 2e-93, Method: Composition-based stats. Identities = 208/436 (47%), Positives = 310/436 (71%), Gaps = 6/436 (1%) Query: 22 RRVAPRLDRRLGELQAMPRPRLAVLACTLLLALLVLWSMLAPIDMVVRGSGRIVASEHNQ 81 +R+A R ++ LQ + PR V+ T+++ LL++W+ AP+ MVVR GR++ S H+Q Sbjct: 10 QRLANRHRQQADLLQELRTPRHWVVLITVMVVLLIVWAAWAPVRMVVRAEGRVIPSTHSQ 69 Query: 82 VIQHLEGGIVSAILVREGAVVRKGQTLISIADVRANADLGEGRVKILGLRAKIARLSAEA 141 V+QHLEGG+V +I V EG V+KG L I+DV+ + +GE RV+ L A++ RL AEA Sbjct: 70 VVQHLEGGVVLSIDVAEGEFVQKGDVLARISDVQGASQMGERRVREQALLARVLRLKAEA 129 Query: 142 AGAASLQMPADLDHDDPAVQSEQAAFAARSAKLMQEMSVLREQAAQRQAELGEAVSRQKS 201 +G+A A LD D A+++E+ AF AR +L Q+ V EQ AQ+++EL E ++R+ + Sbjct: 130 SGSAIADFHA-LDASD-AIRAEREAFLARRQRLEQDQRVTTEQVAQKRSELVELMARRSN 187 Query: 202 QASELDLAQRQYKLIHNMLERNAASQLEDIQAAARVQDAQSKLSANDAMIPRLKAAIAES 261 A+EL+LAQRQ ++ + M++R AAS+LE + A A+VQ ++ LS D +PRLKAAIAE+ Sbjct: 188 LAAELELAQRQQQISNEMMQREAASKLEVLDAQAKVQRLRTMLSDADTSLPRLKAAIAEA 247 Query: 262 QAKMGEASSRFRSDARAELTAAETELARLQEEIKSRNDRVSRSEVKAPMDGVVNRVMINT 321 + + E SRFR++AR +LTAA+T+L R+QEE+K+ +DRV R+E++AP+ G+VNRV + T Sbjct: 248 EGRSRELESRFRAEARTDLTAAQTDLQRVQEELKASSDRVERTELRAPVSGIVNRVNVTT 307 Query: 322 VGGVVRPGDPIIEMTPSDDKLVIEARISPTDRAELATGAKARVKVSAYDYGVYGAMEGVV 381 +GGV+RPGD ++E+TPSD+ +V+EAR+ P DRAEL G V++SAYDY +G +G + Sbjct: 308 IGGVIRPGDAVVEITPSDEHIVVEARVRPADRAELHPGLPVYVRLSAYDYASFGTTQGRL 367 Query: 382 TEISADTVPDENNPRGERSYRIKIAVQRGDNDLQRKLALMPGMTASADIIVGRRTVWQYL 441 TE+SADT+PDE +GER YR+++ + G+ ++PGM A+ADI+VG RTV YL Sbjct: 368 TEVSADTMPDE---KGERFYRVRVGLD-GNQRAFAGRPIVPGMVATADIVVGSRTVLAYL 423 Query: 442 MSPLSRFGQGALREPR 457 +SPL+RF + AL EPR Sbjct: 424 ISPLTRFARAALSEPR 439