BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2191.p (174 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775218.1| hypothetical protein Hsero_1800 [Herbaspiril... 277 4e-73 ref|YP_001352384.1| hypothetical protein mma_0694 [Janthinobacte... 238 3e-61 ref|YP_004751546.1| hypothetical protein CFU_0890 [Collimonas fu... 229 1e-58 ref|ZP_05839348.1| conserved hypothetical protein [Brucella suis... 114 7e-24 ref|YP_002733486.1| hypothetical protein BMEA_A1859 [Brucella me... 114 8e-24 >ref|YP_003775218.1| hypothetical protein Hsero_1800 [Herbaspirillum seropedicae SmR1] gb|ADJ63310.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 174 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 158/174 (90%), Positives = 169/174 (97%) Query: 1 MEFNFINPRKNALAYLVKILSGCLILWYGLRALGIEEPYWAMISLIIVTEPDMTVAKANF 60 ME +FINPRKNAL YL+KILSGCLILWYGLRA+GI EPYWAMISLIIVTEPDMTVAKANF Sbjct: 1 MELHFINPRKNALVYLIKILSGCLILWYGLRAVGIAEPYWAMISLIIVTEPDMTVAKANF 60 Query: 61 RARLINTISGCIVSCIALVIFGPTFLAMLVALTAAVVVAMLLQNYPSNWRLGPATVVILL 120 RARLINT+SGCIVSCIALV+FGPTFLAML ALTAAVVVAMLLQNYPSNWRLGPATVVILL Sbjct: 61 RARLINTLSGCIVSCIALVLFGPTFLAMLAALTAAVVVAMLLQNYPSNWRLGPATVVILL 120 Query: 121 SAAFTGNGLSQELHLALMRVGEVIIGSTVALLQTVIYMWLVKRKEADDGPAAGA 174 SAAF+G GL++ELHLALMRVGEVI+GSTVALLQTV+Y+WLVKRKEADDGPAAGA Sbjct: 121 SAAFSGQGLNEELHLALMRVGEVIVGSTVALLQTVVYIWLVKRKEADDGPAAGA 174 >ref|YP_001352384.1| hypothetical protein mma_0694 [Janthinobacterium sp. Marseille] gb|ABR90745.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 168 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 123/167 (73%), Positives = 151/167 (90%) Query: 1 MEFNFINPRKNALAYLVKILSGCLILWYGLRALGIEEPYWAMISLIIVTEPDMTVAKANF 60 MEFNFI PRKNAL Y++KILSG LILWYGLRALG++EPYWAMISLIIVTEPDMTVAKANF Sbjct: 1 MEFNFITPRKNALVYIIKILSGSLILWYGLRALGLQEPYWAMISLIIVTEPDMTVAKANF 60 Query: 61 RARLINTISGCIVSCIALVIFGPTFLAMLVALTAAVVVAMLLQNYPSNWRLGPATVVILL 120 +ARL+NTISGC+++C++L++FG +F AML+A+T AV+VAML QNYPSNWRLGP TVVIL+ Sbjct: 61 KARLVNTISGCVIACLSLLLFGTSFFAMLIAMTLAVIVAMLWQNYPSNWRLGPVTVVILM 120 Query: 121 SAAFTGNGLSQELHLALMRVGEVIIGSTVALLQTVIYMWLVKRKEAD 167 SAAF+G G+++ELHLA +RV EV+ GS VALLQTVIYM + K +++D Sbjct: 121 SAAFSGAGVNEELHLAFLRVSEVMAGSIVALLQTVIYMQIQKWQQSD 167 >ref|YP_004751546.1| hypothetical protein CFU_0890 [Collimonas fungivorans Ter331] gb|AEK60723.1| Conserved domain protein [Collimonas fungivorans Ter331] Length = 169 Score = 229 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 120/163 (73%), Positives = 146/163 (89%) Query: 1 MEFNFINPRKNALAYLVKILSGCLILWYGLRALGIEEPYWAMISLIIVTEPDMTVAKANF 60 M+F FI+PRKNAL YL+KIL+G LI WYGLRALG++EPYWAMISLIIVTEPD+ +AKANF Sbjct: 1 MDFQFISPRKNALVYLIKILTGALITWYGLRALGLQEPYWAMISLIIVTEPDVNLAKANF 60 Query: 61 RARLINTISGCIVSCIALVIFGPTFLAMLVALTAAVVVAMLLQNYPSNWRLGPATVVILL 120 RARLINT++GC+V+C+ALV+FGP FL++LVAL +V+VAMLLQNYP+NWRLGPATVVIL+ Sbjct: 61 RARLINTLNGCVVACLALVLFGPGFLSLLVALATSVLVAMLLQNYPANWRLGPATVVILM 120 Query: 121 SAAFTGNGLSQELHLALMRVGEVIIGSTVALLQTVIYMWLVKR 163 SAA G GL QEL AL+RVGEVI GSTVALLQ+++Y + +KR Sbjct: 121 SAAIGGKGLHQELEYALLRVGEVIAGSTVALLQSLVYSYALKR 163 >ref|ZP_05839348.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gb|EEW89346.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] Length = 176 Score = 114 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 65/154 (42%), Positives = 90/154 (58%), Gaps = 1/154 (0%) Query: 4 NFINPRKNALAYLVKILSGCLILWYGLRALGIEEPYWAMISLIIVTEPDMTVAKANFRAR 63 +F NP K AL Y + GCLI W+ LR +GIE P W+M+++ IV++PD+ + R R Sbjct: 5 HFSNPEK-ALHYASQTFIGCLISWFALRGIGIEHPIWSMMTVFIVSDPDIHTTLSLARVR 63 Query: 64 LINTISGCIVSCIALVIFGPTFLAMLVALTAAVVVAMLLQNYPSNWRLGPATVVILLSAA 123 INT GC + + + + G + + L A V V +++ NYPSNWRL PATVVI++ A Sbjct: 64 AINTAVGCTIGMVMIWLVGYSPVISLFAAAITVGVVVMIDNYPSNWRLAPATVVIIMDAG 123 Query: 124 FTGNGLSQELHLALMRVGEVIIGSTVALLQTVIY 157 QEL LAL R E+ +G VAL IY Sbjct: 124 SAAQTSDQELWLALSRFLEITLGCVVALSVAWIY 157 >ref|YP_002733486.1| hypothetical protein BMEA_A1859 [Brucella melitensis ATCC 23457] ref|ZP_05465791.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gb|ACO01532.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gb|EEZ17320.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] Length = 176 Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 65/154 (42%), Positives = 90/154 (58%), Gaps = 1/154 (0%) Query: 4 NFINPRKNALAYLVKILSGCLILWYGLRALGIEEPYWAMISLIIVTEPDMTVAKANFRAR 63 +F NP K AL Y + GCLI W+ LR +GIE P W+M+++ IV++PD+ + R R Sbjct: 5 HFSNPGK-ALHYASQTFIGCLISWFALRGIGIEHPIWSMMTVFIVSDPDIHTTLSLARVR 63 Query: 64 LINTISGCIVSCIALVIFGPTFLAMLVALTAAVVVAMLLQNYPSNWRLGPATVVILLSAA 123 INT GC + + + + G + + L A V V +++ NYPSNWRL PATVVI++ A Sbjct: 64 AINTAVGCTIGMVMIWLVGDSPVISLFAAAITVGVVVMIDNYPSNWRLAPATVVIIMDAG 123 Query: 124 FTGNGLSQELHLALMRVGEVIIGSTVALLQTVIY 157 QEL LAL R E+ +G VAL IY Sbjct: 124 SAAQTSDQELWLALSRFLEITLGCVVALSVAWIY 157