BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2183.p (378 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775211.1| spermidine synthase [Herbaspirillum seropedi... 534 e-149 ref|YP_004753214.1| putative Spermidine synthase [Collimonas fun... 396 e-108 ref|YP_001352379.1| hypothetical protein mma_0689 [Janthinobacte... 395 e-108 ref|YP_001099081.1| putative spermidine synthase [Herminiimonas ... 394 e-107 ref|ZP_08274499.1| putative Spermidine synthase [Oxalobacteracea... 374 e-101 >ref|YP_003775211.1| spermidine synthase [Herbaspirillum seropedicae SmR1] gb|ADJ63303.1| spermidine synthase protein [Herbaspirillum seropedicae SmR1] Length = 275 Score = 534 bits (1375), Expect = e-149, Method: Composition-based stats. Identities = 260/274 (94%), Positives = 266/274 (97%) Query: 105 MLIRRKSIEAQANTKAGPNRRRHQLEADASKPRKPKYAPVTLSELEGVRYLHFGTEWVQG 164 MLIRRKSIEAQANTKAGPNRRR QLEADASKPRK KYAPVTLSELEGVRYLHFGTEWVQG Sbjct: 1 MLIRRKSIEAQANTKAGPNRRRQQLEADASKPRKIKYAPVTLSELEGVRYLHFGTEWVQG 60 Query: 165 AMRIRKPDWIELEYAQQMMAWMLFNRTPRHIVQLGLGTGALTKFSYRQFPQAQVTAVELN 224 AMRIRKPDWIELEYAQQMMAWMLFNR PRHIVQLGLGTGALTKFSYRQFPQAQVTAVELN Sbjct: 61 AMRIRKPDWIELEYAQQMMAWMLFNRDPRHIVQLGLGTGALTKFSYRQFPQAQVTAVELN 120 Query: 225 PAVIAICHSMFKLPEPDERLMLIESDAMDFIVHAATHGIIDALQVDLYDATARGPVLDTP 284 PAVI ICHSMFKLPEPDERLM++ESDAMDFIVHAA+HGIIDALQVDLYDATARGPVLDTP Sbjct: 121 PAVITICHSMFKLPEPDERLMILESDAMDFIVHAASHGIIDALQVDLYDATARGPVLDTP 180 Query: 285 EFYQACYDSLAPGGVMTVNLFGDHPSYAKNLRAMEYAFDTVVSLPEVHDGNVVALAFKGA 344 EFYQACYDSLA GGVMTVNLFGDHPSYAKNLRAME+AFDTVVSLPEVHDGNVVALAFKG Sbjct: 181 EFYQACYDSLAAGGVMTVNLFGDHPSYAKNLRAMEHAFDTVVSLPEVHDGNVVALAFKGE 240 Query: 345 VTFDFPELYARAALIESQTRLPAKSWVNGIKSGL 378 V FDFPELYARAALIE+QT+LPAKSWVNGIKS L Sbjct: 241 VQFDFPELYARAALIETQTKLPAKSWVNGIKSAL 274 >ref|YP_004753214.1| putative Spermidine synthase [Collimonas fungivorans Ter331] gb|AEK62391.1| putative Spermidine synthase [Collimonas fungivorans Ter331] Length = 278 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 198/273 (72%), Positives = 223/273 (81%), Gaps = 1/273 (0%) Query: 105 MLIRRKSIEAQANTKAGPNRRRHQLEADASKP-RKPKYAPVTLSELEGVRYLHFGTEWVQ 163 MLI+RKSIEA AN GP +R + D KP RKPK+APVTLSE +GVR+LHFGTEWVQ Sbjct: 1 MLIKRKSIEADANRMDGPRKRSEVAKKDTPKPPRKPKFAPVTLSEQDGVRFLHFGTEWVQ 60 Query: 164 GAMRIRKPDWIELEYAQQMMAWMLFNRTPRHIVQLGLGTGALTKFSYRQFPQAQVTAVEL 223 GAMR+RKPDW ELEYAQQMMAWMLFN P+HIVQLGLGT ALTKFSYRQFP A+VTAVEL Sbjct: 61 GAMRLRKPDWPELEYAQQMMAWMLFNPEPQHIVQLGLGTAALTKFSYRQFPAARVTAVEL 120 Query: 224 NPAVIAICHSMFKLPEPDERLMLIESDAMDFIVHAATHGIIDALQVDLYDATARGPVLDT 283 NP+V+AIC SMFKLP DERL ++E DAMDF++ HG IDALQVDLYDATARGPVLDT Sbjct: 121 NPSVLAICCSMFKLPPDDERLSVLEMDAMDFVMDPLNHGSIDALQVDLYDATARGPVLDT 180 Query: 284 PEFYQACYDSLAPGGVMTVNLFGDHPSYAKNLRAMEYAFDTVVSLPEVHDGNVVALAFKG 343 PEFY AC L G+MTVNLFGDHPSYAKNL+AM +AFD V LPEVH+GNV+A+AFK Sbjct: 181 PEFYSACAACLKDDGIMTVNLFGDHPSYAKNLKAMMFAFDDVWCLPEVHEGNVIAIAFKK 240 Query: 344 AVTFDFPELYARAALIESQTRLPAKSWVNGIKS 376 A DF LY RAA I + T+LPAKSWVNG+K+ Sbjct: 241 APPADFSALYERAAEITAATKLPAKSWVNGLKT 273 >ref|YP_001352379.1| hypothetical protein mma_0689 [Janthinobacterium sp. Marseille] gb|ABR90700.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 276 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 195/272 (71%), Positives = 223/272 (81%), Gaps = 1/272 (0%) Query: 105 MLIRRKSIEAQANTKAGPNRRRHQLEADASKPRKPKYAPVTLSELEGVRYLHFGTEWVQG 164 MLI+RKSIEA AN K+GP ++ + A A RK K+APVTLSE G+RYLHFGTEWVQG Sbjct: 1 MLIKRKSIEADANLKSGPGKKSPPV-AKAKPVRKVKFAPVTLSEQFGIRYLHFGTEWVQG 59 Query: 165 AMRIRKPDWIELEYAQQMMAWMLFNRTPRHIVQLGLGTGALTKFSYRQFPQAQVTAVELN 224 AMRI KPDWIELEYAQQMMAWMLFN P+HIVQLGLGTGALTKFSY++FP+A+VTAV+LN Sbjct: 60 AMRISKPDWIELEYAQQMMAWMLFNEKPQHIVQLGLGTGALTKFSYKRFPEARVTAVDLN 119 Query: 225 PAVIAICHSMFKLPEPDERLMLIESDAMDFIVHAATHGIIDALQVDLYDATARGPVLDTP 284 P+VI IC SMFKLP DERL +IE DA++++ A G IDALQVDLYDATARGPVLDTP Sbjct: 120 PSVITICASMFKLPPNDERLTVIEMDALEYVNDPANLGRIDALQVDLYDATARGPVLDTP 179 Query: 285 EFYQACYDSLAPGGVMTVNLFGDHPSYAKNLRAMEYAFDTVVSLPEVHDGNVVALAFKGA 344 EFYQAC L P G+MTVNLFGDHPSYA+NL AM YAFDTV+SLPEVH+GNV+A+AF Sbjct: 180 EFYQACAACLTPDGIMTVNLFGDHPSYARNLSAMHYAFDTVISLPEVHEGNVIAIAFNST 239 Query: 345 VTFDFPELYARAALIESQTRLPAKSWVNGIKS 376 D LY RAA I + T+LPAKSWVNGIK+ Sbjct: 240 PELDIAALYDRAAQITAATKLPAKSWVNGIKA 271 >ref|YP_001099081.1| putative spermidine synthase [Herminiimonas arsenicoxydans] emb|CAL60954.1| Conserved hypothetical protein, putative spermidine synthase [Herminiimonas arsenicoxydans] Length = 276 Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 194/273 (71%), Positives = 222/273 (81%), Gaps = 3/273 (1%) Query: 105 MLIRRKSIEAQANTKAGPNRRRHQLEADASKP-RKPKYAPVTLSELEGVRYLHFGTEWVQ 163 MLI+RKSIEA AN K+GP ++ + KP RK K+APVTLSE GVRYLHFGTEWVQ Sbjct: 1 MLIKRKSIEADANLKSGPGKK--SIAPAKPKPARKVKFAPVTLSEQFGVRYLHFGTEWVQ 58 Query: 164 GAMRIRKPDWIELEYAQQMMAWMLFNRTPRHIVQLGLGTGALTKFSYRQFPQAQVTAVEL 223 GAMRI KPDWIELEYAQQMMAWMLFN P+HIVQLGLGTGALTKFSY+ F +AQVTAV+L Sbjct: 59 GAMRISKPDWIELEYAQQMMAWMLFNDKPQHIVQLGLGTGALTKFSYKWFREAQVTAVDL 118 Query: 224 NPAVIAICHSMFKLPEPDERLMLIESDAMDFIVHAATHGIIDALQVDLYDATARGPVLDT 283 NP+VI IC +MFKLP DERL +IE DA++++ A G IDALQVD+YDATARGPVLDT Sbjct: 119 NPSVITICETMFKLPPNDERLNVIEMDALEYVNDPANLGRIDALQVDVYDATARGPVLDT 178 Query: 284 PEFYQACYDSLAPGGVMTVNLFGDHPSYAKNLRAMEYAFDTVVSLPEVHDGNVVALAFKG 343 PEFYQ+C L P G+MTVNLFGDHPSYA+NL AM +AFDTV+SLPEVHDGNV+A+AF Sbjct: 179 PEFYQSCAACLTPDGIMTVNLFGDHPSYARNLSAMHFAFDTVISLPEVHDGNVIAIAFNT 238 Query: 344 AVTFDFPELYARAALIESQTRLPAKSWVNGIKS 376 T D LY RAA I + T+LPAKSWVNGIK+ Sbjct: 239 TPTLDIAALYERAAQITATTKLPAKSWVNGIKA 271 >ref|ZP_08274499.1| putative Spermidine synthase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32033.1| putative Spermidine synthase [Oxalobacteraceae bacterium IMCC9480] Length = 275 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 181/271 (66%), Positives = 216/271 (79%), Gaps = 1/271 (0%) Query: 105 MLIRRKSIEAQANTKAGPNRRRHQLEADASKPRKPKYAPVTLSELEGVRYLHFGTEWVQG 164 MLI+RKSIEAQAN GP R+ + + PRK KYAPVTLSE +GVR+LHFGTEWVQG Sbjct: 1 MLIKRKSIEAQANHMVGPGRKS-PVAPVSKPPRKIKYAPVTLSEQDGVRFLHFGTEWVQG 59 Query: 165 AMRIRKPDWIELEYAQQMMAWMLFNRTPRHIVQLGLGTGALTKFSYRQFPQAQVTAVELN 224 AMR+RKPDWIELEYAQQMM WMLF P H+VQLGLGTGALTKF YR F +A+VTAVELN Sbjct: 60 AMRLRKPDWIELEYAQQMMGWMLFIDNPEHVVQLGLGTGALTKFCYRTFAEARVTAVELN 119 Query: 225 PAVIAICHSMFKLPEPDERLMLIESDAMDFIVHAATHGIIDALQVDLYDATARGPVLDTP 284 P+VI IC +MFK+P D+RL ++E DA DF+ A IDA+QVDLYDATA+GPVL++ Sbjct: 120 PSVITICETMFKMPPEDDRLRVLEMDANDFVNDPANLDSIDAMQVDLYDATAKGPVLESA 179 Query: 285 EFYQACYDSLAPGGVMTVNLFGDHPSYAKNLRAMEYAFDTVVSLPEVHDGNVVALAFKGA 344 EFYQ+C L G+MTVNLFGDHPS+ +NL+AM +AFD V+ LPEVH+GNVVALAF+ Sbjct: 180 EFYQSCAACLRADGIMTVNLFGDHPSFNRNLKAMRFAFDDVICLPEVHEGNVVALAFRRR 239 Query: 345 VTFDFPELYARAALIESQTRLPAKSWVNGIK 375 DF +LYARAA + ++T+LPAKSWVNGIK Sbjct: 240 RQIDFADLYARAANVVARTKLPAKSWVNGIK 270