BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2182.p         (454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07742687.1| hypothetical protein VIBC2010_20300 [Vibrio c...   105   1e-20
ref|ZP_05110712.1| hypothetical protein LDG_2318 [Legionella dra...    80   9e-13

>ref|ZP_07742687.1| hypothetical protein VIBC2010_20300 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gb|EFP96994.1| hypothetical protein VIBC2010_20300 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 443

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 102/370 (27%), Positives = 187/370 (50%), Gaps = 29/370 (7%)

Query: 41  CADAYAYTKIGQLYAEHGFALHEWSKLRLYAYPLFIAAVDIAASWLAVDQGIALFAVQLA 100
           C DA  Y  + +    +G       ++R + YP F++ V   +S++ V    ++F +QL 
Sbjct: 40  CCDANYYLSLAKDINLNGIESFN-DQVRTWGYPWFLSIVVEISSFINVPLHFSIFFIQLV 98

Query: 101 VYFSAVILLSGNLTKLVSLRVGNLVFFALTANVFLYPYLAISLSDGMSVSLLIFIAA--- 157
           +Y+ A++    +L + ++  V    +  L  NVF  PY  ++L+D + ++L++   A   
Sbjct: 99  LYYLAILYCYNSLVR-INGNVAITSYIFLCFNVFAIPYSVLTLTDSVYLTLILVFYAQMF 157

Query: 158 -LIVHMQSSGLSAARVFL-MGVLLGLGIMVRPANLYWLAMPVVLLGLFAWSERQGRGWHL 215
            L+  ++ + +  +++   M  ++ + I++RPA++ W+ +P+  L  +A   RQ    H 
Sbjct: 158 CLLHQLEKTDIDVSKLLAWMSFVVCVNIVIRPASV-WMLVPLFCLISYAAIRRQ---IHF 213

Query: 216 LRFGAALVLGFFLAVLPQIIINYRFFDELTFLPVFKLGSFQIRSGILMIKYGTNMTGNGP 275
           L+F    VL     ++ Q+ IN   + + TFLPV +LG  QI+ GI  IKYGT + G G 
Sbjct: 214 LQFSCMSVLAVSPLII-QMAINTIHYGKHTFLPVIELGELQIKWGIQYIKYGTWL-GGGA 271

Query: 276 PAMVYPNI-WFNNAVPDLS--WYFLHPWLGVRTMFLHLFSALDFDYLFCYIYDLRPKYRP 332
           P   YP+    +N+  DL   WY  + + G++ +F+    A DFDYL  Y+Y     Y P
Sbjct: 272 PQNYYPSTALIDNSQSDLGLIWYLYNFFDGIKLLFVKFIGAFDFDYLVPYVYS--KPYVP 329

Query: 333 VLFLYSQTVLFWGVVGFFAAARDIRAWEQRGGTKPKASVVFMALLLAAVLGWCAVTSISA 392
            L         W  +G      ++        +    ++ F+ L++  ++ W AV+  SA
Sbjct: 330 YLPSIMAFAFLW--IGLLFTVCNLM-------SNRLGNLRFIPLII--LVSWGAVSLSSA 378

Query: 393 VENRFSLPVV 402
           +E RF+LP++
Sbjct: 379 LELRFTLPIL 388


>ref|ZP_05110712.1| hypothetical protein LDG_2318 [Legionella drancourtii LLAP12]
 gb|EET11613.1| hypothetical protein LDG_2318 [Legionella drancourtii LLAP12]
          Length = 436

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 86/351 (24%), Positives = 159/351 (45%), Gaps = 36/351 (10%)

Query: 66  KLRLYAYPLFIAAVDIAASWLAVDQGIALFAVQLAVYFSAVILLSGNLTKLVSLRVGNLV 125
           ++R Y YP  +  +++    L       +   Q  +Y  A  L++ +LTK    R+   +
Sbjct: 69  EVRTYGYPFILYFINLITP-LKRIYAFHVLVWQFVMYVGAAYLVARSLTKNERFRL--FI 125

Query: 126 FFALTANVFLYPYLAISLSDGMSVSLLIFIAALIVHMQSSGLSAARVFLMGVLLGLGIMV 185
           F +L  N+++  YL+++L++ +S  LL+   A+   M+ S     RVFL+G++    + V
Sbjct: 126 FASLLLNIYILSYLSVTLTESLSNCLLLISIAIFFGMRKSYF---RVFLLGLVSAYAVEV 182

Query: 186 RPANLYWLAMPVVLLGLFAWSERQGRGW--HLLRFGAALVLGFFLAVLPQIIINYRFFDE 243
           RPANL+  A   ++       E+Q R     L  FG   ++ F    LPQI  NY  FD+
Sbjct: 183 RPANLWLFAFISLIFFWECLEEKQLREIFVSLFIFGITALIVF----LPQIYYNYHTFDK 238

Query: 244 LTFLPVFKLGSFQIRSGILMIKYGTNMTGNGPP---AMVYPNIWFNNAVPDLSWYFLHPW 300
           LT  P   LG  Q   G    K  T+++ +  P   A V+PN +  ++     W+ ++  
Sbjct: 239 LTPFPAMSLGKLQYSWG----KEATHVSFSFIPTAVANVFPNPFVTSSSHKFYWFSIN-- 292

Query: 301 LGVRTMFLHLFSALDFDYLFCYIYDLRPKYRPVLFLYSQTVLFWGVVGFFAAARDIRAWE 360
            G+  + L +        LF Y  ++   ++ V+   S  ++++G  G     ++I   +
Sbjct: 293 -GLSYLMLKILMIFSHYTLFVY-QNISESFQKVIVFLSSFIVYFGFCGLILQYKNIAIKQ 350

Query: 361 QRGGTKPKASVVFMALLLAAVLGWCAVTSISAVENRFSLPVVAILLPLAAW 411
           +R              ++  V     +   S +E+RF+  +  +L P A +
Sbjct: 351 RRA-------------IIIGVFFCILLHIFSGLEDRFTFAIYLLLFPFALY 388