BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2180.p (311 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EGH51385.1| lipopolysaccharide biosynthesis protein [Pseudomo... 437 e-120 ref|NP_790904.1| lipopolysaccharide biosynthesis protein [Pseudo... 437 e-120 ref|ZP_03395394.1| lipopolysaccharide biosynthesis protein [Pseu... 436 e-120 ref|ZP_08780769.1| WxcM-like domain-containing protein [Methylob... 436 e-120 ref|ZP_07003732.1| Bifunctional acetyl transferase/isomerase [Ps... 436 e-120 >gb|EGH51385.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae Cit 7] Length = 316 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 198/309 (64%), Positives = 254/309 (82%) Query: 3 FYVHPNALCESAHIGENTRIWAFAHILPQAVIGSDCNICDGVFVENDVVVGDRVTIKCGV 62 F+VH +ALCES +IG+++R+WAFAHILP A +GS+CN+CD VF+ENDV++GDRVT+KCGV Sbjct: 7 FFVHSHALCESENIGKDSRVWAFAHILPGASLGSECNVCDNVFIENDVIIGDRVTLKCGV 66 Query: 63 QLWDGVHLENDVFIGPNVTFTNDLRPRSKQYPASFAKTLVCEGASIGANATILPGLVIGR 122 Q+WDG+ +E+DVFIGPN TFTNDL PRSK YP SFA+T++ +GAS+GAN TILPG+ IG Sbjct: 67 QVWDGITIEDDVFIGPNATFTNDLFPRSKVYPQSFARTIIRKGASLGANCTILPGITIGI 126 Query: 123 SAMIGAGAVVTQSVPPYAIVVGNPARITGYANSVEEVTSSDSGGVVSKGPVTPTNVKGVT 182 +AM+GAGAVVT+SVPP AIVVGNPA+I GY ++ SS++ + VT T+VK VT Sbjct: 127 NAMVGAGAVVTRSVPPNAIVVGNPAKIIGYVDAKPVNASSETRPEKAAPGVTATSVKNVT 186 Query: 183 LHRFNHVKDLRGDLSVGEFEREIPFVPKRYFLVFDVPSEKTRGEHAHKSCHQFLICVRGR 242 LH N V D+RG LS GEFER +PF +RYFLV+DVP+ +TRGEHAH+ CHQFL+ V+G Sbjct: 187 LHTMNEVADIRGSLSAGEFERSVPFKSERYFLVYDVPTAETRGEHAHRICHQFLVAVKGS 246 Query: 243 CAVVADDGTSRQEVMLDSPATGVYLPPMTWGIQYKYSEDAILLVFASDYYDASDYIRDYD 302 VVADDG +R+E +LD P G++LPPMTWGIQY+YS+DA+LLVFAS YYDA DYIR+Y+ Sbjct: 247 VHVVADDGVNREEFILDKPNQGIHLPPMTWGIQYRYSQDAVLLVFASHYYDAGDYIRNYE 306 Query: 303 EFLALLSNG 311 EF +L++N Sbjct: 307 EFKSLIANA 315 >ref|NP_790904.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato str. DC3000] gb|AAO54599.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato str. DC3000] gb|EGH99637.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 316 Score = 437 bits (1123), Expect = e-120, Method: Composition-based stats. Identities = 198/310 (63%), Positives = 255/310 (82%), Gaps = 2/310 (0%) Query: 3 FYVHPNALCESAHIGENTRIWAFAHILPQAVIGSDCNICDGVFVENDVVVGDRVTIKCGV 62 F+VH +ALCES +IG+++R+WAFAHILP A +GS+CN+CD VF+ENDV++GDRVT+KCGV Sbjct: 7 FFVHSHALCESENIGKDSRVWAFAHILPGARLGSECNVCDNVFIENDVIIGDRVTLKCGV 66 Query: 63 QLWDGVHLENDVFIGPNVTFTNDLRPRSKQYPASFAKTLVCEGASIGANATILPGLVIGR 122 Q+WDG+ +E+DVFIGPN TFTNDL PRSK YP +FA+T++ +GAS+GAN TILPG+ IG Sbjct: 67 QVWDGITIEDDVFIGPNATFTNDLFPRSKVYPQTFARTIIRKGASLGANCTILPGITIGI 126 Query: 123 SAMIGAGAVVTQSVPPYAIVVGNPARITGYANSVEEVTSSDSGGVVSKGP-VTPTNVKGV 181 +AM+GAGAVVT+SVPP AIVVGNPA+I GY ++ + V ++ K P VT T+VK V Sbjct: 127 NAMVGAGAVVTRSVPPNAIVVGNPAKIIGYVDA-KPVNANSETRAEQKAPGVTATSVKNV 185 Query: 182 TLHRFNHVKDLRGDLSVGEFEREIPFVPKRYFLVFDVPSEKTRGEHAHKSCHQFLICVRG 241 TLH N V D+RG LS GEFER +PF +RYFLV+DVP+ +TRGEHAH+ CHQFL+ V+G Sbjct: 186 TLHTMNEVADIRGSLSAGEFERSVPFKTERYFLVYDVPTAETRGEHAHRICHQFLVAVKG 245 Query: 242 RCAVVADDGTSRQEVMLDSPATGVYLPPMTWGIQYKYSEDAILLVFASDYYDASDYIRDY 301 VVADDG +R+E +LD P G++LPPMTWGIQY+YS+DA+LLVFAS YYDA DYIR+Y Sbjct: 246 SVHVVADDGVNREEFILDKPNQGIHLPPMTWGIQYRYSQDAVLLVFASHYYDAGDYIRNY 305 Query: 302 DEFLALLSNG 311 +EF +L++N Sbjct: 306 EEFKSLIANA 315 >ref|ZP_03395394.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato T1] ref|ZP_07229438.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato Max13] ref|ZP_07250913.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato K40] ref|ZP_07260879.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato NCPPB 1108] gb|EEB61633.1| lipopolysaccharide biosynthesis protein [Pseudomonas syringae pv. tomato T1] Length = 316 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 198/310 (63%), Positives = 255/310 (82%), Gaps = 2/310 (0%) Query: 3 FYVHPNALCESAHIGENTRIWAFAHILPQAVIGSDCNICDGVFVENDVVVGDRVTIKCGV 62 F+VH +ALCES +IG+++R+WAFAHILP A +GS+CN+CD VF+ENDV++GDRVT+KCGV Sbjct: 7 FFVHSHALCESDNIGKDSRVWAFAHILPGARLGSECNVCDNVFIENDVIIGDRVTLKCGV 66 Query: 63 QLWDGVHLENDVFIGPNVTFTNDLRPRSKQYPASFAKTLVCEGASIGANATILPGLVIGR 122 Q+WDG+ +E+DVFIGPN TFTNDL PRSK YP +FA+T++ +GAS+GAN TILPG+ IG Sbjct: 67 QVWDGITIEDDVFIGPNATFTNDLFPRSKVYPQTFARTIIRKGASLGANCTILPGITIGI 126 Query: 123 SAMIGAGAVVTQSVPPYAIVVGNPARITGYANSVEEVTSSDSGGVVSKGP-VTPTNVKGV 181 +AM+GAGAVVT+SVPP AIVVGNPA+I GY ++ + V ++ K P VT T+VK V Sbjct: 127 NAMVGAGAVVTRSVPPNAIVVGNPAKIIGYVDA-KPVNANSETRAEQKAPGVTATSVKNV 185 Query: 182 TLHRFNHVKDLRGDLSVGEFEREIPFVPKRYFLVFDVPSEKTRGEHAHKSCHQFLICVRG 241 TLH N V D+RG LS GEFER +PF +RYFLV+DVP+ +TRGEHAH+ CHQFL+ V+G Sbjct: 186 TLHTMNEVADIRGSLSAGEFERSVPFKSERYFLVYDVPTAETRGEHAHRICHQFLVAVKG 245 Query: 242 RCAVVADDGTSRQEVMLDSPATGVYLPPMTWGIQYKYSEDAILLVFASDYYDASDYIRDY 301 VVADDG +R+E +LD P G++LPPMTWGIQY+YS+DA+LLVFAS YYDA DYIR+Y Sbjct: 246 SVHVVADDGVNREEFILDKPNQGIHLPPMTWGIQYRYSQDAVLLVFASHYYDAGDYIRNY 305 Query: 302 DEFLALLSNG 311 +EF +L++N Sbjct: 306 EEFKSLIANA 315 >ref|ZP_08780769.1| WxcM-like domain-containing protein [Methylobacter tundripaludum SV96] gb|EGW22944.1| WxcM-like domain-containing protein [Methylobacter tundripaludum SV96] Length = 315 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 205/309 (66%), Positives = 244/309 (78%) Query: 2 SFYVHPNALCESAHIGENTRIWAFAHILPQAVIGSDCNICDGVFVENDVVVGDRVTIKCG 61 ++YVHP A+CES +IG NTRIWAFAHILP A IG +CNICDGVFVENDVVVG+RVTIKCG Sbjct: 3 NYYVHPQAICESNNIGTNTRIWAFAHILPNAKIGEECNICDGVFVENDVVVGNRVTIKCG 62 Query: 62 VQLWDGVHLENDVFIGPNVTFTNDLRPRSKQYPASFAKTLVCEGASIGANATILPGLVIG 121 VQLWDGV LE+DVF+GPNVTFTND PRSK YP +FA+ ++ +GASIGANAT+LP + +G Sbjct: 63 VQLWDGVELEDDVFVGPNVTFTNDKFPRSKVYPENFARIVISKGASIGANATLLPNITVG 122 Query: 122 RSAMIGAGAVVTQSVPPYAIVVGNPARITGYANSVEEVTSSDSGGVVSKGPVTPTNVKGV 181 +AMIGAGAVVT+SVPP AIVVGNPA+I GY ++ + +S K T V GV Sbjct: 123 VNAMIGAGAVVTRSVPPNAIVVGNPAKIVGYVDAKNDKIASSEKLNHQKQGKLETTVSGV 182 Query: 182 TLHRFNHVKDLRGDLSVGEFEREIPFVPKRYFLVFDVPSEKTRGEHAHKSCHQFLICVRG 241 TLH F V D+RG LSVGEFEREIPF P RYFLVFDVP+ +TRGEHAH C QFLI V+G Sbjct: 183 TLHNFRAVPDMRGSLSVGEFEREIPFRPLRYFLVFDVPTAETRGEHAHIKCQQFLIAVKG 242 Query: 242 RCAVVADDGTSRQEVMLDSPATGVYLPPMTWGIQYKYSEDAILLVFASDYYDASDYIRDY 301 VVADDG +R+E +LD +G+YLP MTWGIQY YS DA+LLVFAS+YY++SDYIR+Y Sbjct: 243 SVRVVADDGKNREEFLLDRNNSGLYLPAMTWGIQYHYSPDAVLLVFASEYYESSDYIRNY 302 Query: 302 DEFLALLSN 310 +F+ N Sbjct: 303 SDFIEAAKN 311 >ref|ZP_07003732.1| Bifunctional acetyl transferase/isomerase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gb|EFI00721.1| Bifunctional acetyl transferase/isomerase [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 316 Score = 436 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 198/309 (64%), Positives = 252/309 (81%) Query: 3 FYVHPNALCESAHIGENTRIWAFAHILPQAVIGSDCNICDGVFVENDVVVGDRVTIKCGV 62 F+VH +ALCES +IG+++R+WAFAHILP A +GS+CN+CD VF+ENDV++GDRVT+KCGV Sbjct: 7 FFVHSHALCESENIGKDSRVWAFAHILPGASLGSECNVCDNVFIENDVIIGDRVTLKCGV 66 Query: 63 QLWDGVHLENDVFIGPNVTFTNDLRPRSKQYPASFAKTLVCEGASIGANATILPGLVIGR 122 Q+WDG+ +E+DVFIGPN TFTNDL PRSK YP SFA+T++ +GAS+GAN TILPG+ IG Sbjct: 67 QVWDGITIEDDVFIGPNATFTNDLFPRSKVYPQSFARTIIRKGASLGANCTILPGITIGI 126 Query: 123 SAMIGAGAVVTQSVPPYAIVVGNPARITGYANSVEEVTSSDSGGVVSKGPVTPTNVKGVT 182 +AM+GAGAVVT+SVPP AIVVGNPA+I GY ++ SS++ VT T+VK VT Sbjct: 127 NAMVGAGAVVTRSVPPNAIVVGNPAKIIGYVDAKPVNASSETRPEKVAPGVTATSVKNVT 186 Query: 183 LHRFNHVKDLRGDLSVGEFEREIPFVPKRYFLVFDVPSEKTRGEHAHKSCHQFLICVRGR 242 LH N V D+RG LS GEFER +PF +RYFLV+DVP+ +TRGEHAH+ CHQFL+ V+G Sbjct: 187 LHTMNEVADIRGSLSAGEFERSVPFKSERYFLVYDVPTAETRGEHAHRLCHQFLVAVKGS 246 Query: 243 CAVVADDGTSRQEVMLDSPATGVYLPPMTWGIQYKYSEDAILLVFASDYYDASDYIRDYD 302 VVADDG +R+E +LD P G++LPPMTWGIQY+YS+DA+LLVFAS YYDA DYIR+Y+ Sbjct: 247 VHVVADDGVNREEFILDKPNQGIHLPPMTWGIQYRYSQDAVLLVFASHYYDAGDYIRNYE 306 Query: 303 EFLALLSNG 311 EF L++N Sbjct: 307 EFKTLIANA 315