BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2178.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08780772.1| DegT/DnrJ/EryC1/StrS aminotransferase [Methyl... 421 e-115 ref|ZP_08182369.1| nucleotide sugar aminotransferase [Xanthomona... 398 e-109 gb|AEL05682.1| aminotransferase [Xanthomonas campestris pv. raph... 392 e-107 ref|YP_365443.1| aminotransferase [Xanthomonas campestris pv. ve... 392 e-107 ref|NP_636009.1| aminotransferase [Xanthomonas campestris pv. ca... 392 e-107 >ref|ZP_08780772.1| DegT/DnrJ/EryC1/StrS aminotransferase [Methylobacter tundripaludum SV96] gb|EGW22947.1| DegT/DnrJ/EryC1/StrS aminotransferase [Methylobacter tundripaludum SV96] Length = 371 Score = 421 bits (1082), Expect = e-115, Method: Composition-based stats. Identities = 201/369 (54%), Positives = 259/369 (70%) Query: 19 QRMKPLKAINDLYRHNEPLEPEISKVFQNFLARGWYVLGAEVTAFEREFAAYCGTEYALG 78 + + LKAINDL RH +PL+ E++ +A GW+VLG+EV AFE+EFA+YCG ++ + Sbjct: 3 KNIPALKAINDLNRHIQPLQSELNAAVSRVIASGWFVLGSEVKAFEQEFASYCGVQHCVT 62 Query: 79 VANGTDALELALRTAGVEAGDRVALVANAGGYGTFAVNAIGAVPVYVDVDAFSLNMDVLA 138 +ANGTDALELALR+ + +V VANAG Y T A+ A A PVY D+DA SL +DV Sbjct: 63 LANGTDALELALRSLNISKNSKVLTVANAGMYSTAAILATRATPVYADIDAGSLLIDVAD 122 Query: 139 LERALQASSISAIIVTHLYGRLANIEEISRLARDQGVKLIEDCAQAHGAVRDGKKAGSWG 198 R + + I IIVTHLYG LA+++++ +LA + + +IEDCAQAHGA+ + KKAGS+G Sbjct: 123 ATRLITSQHIDTIIVTHLYGLLADVQQLVQLANSKNIPVIEDCAQAHGAMFNEKKAGSFG 182 Query: 199 DLATFSFYPTKNLGALGDGGALTMNAPDVAERAKQLRQYGWTQKYRSTVIGGRNSRLDEV 258 D+A FSFYPTKNLGALGDGGA+ + D+A+R +QLRQYGW KY +T+ GGRNSRLDE+ Sbjct: 183 DIACFSFYPTKNLGALGDGGAVVTHRDDLAQRVRQLRQYGWESKYCATLAGGRNSRLDEM 242 Query: 259 QAAILRIKLPYLDRWNARRRAIFDLYGKLLRHPQITLPAPSGPDHVGHLYVIRCGQRDSL 318 QAAILRI LP LD WNARRR I Y K + H +I P G ++V HLYVI+ RDSL Sbjct: 243 QAAILRIMLPLLDGWNARRREIATQYSKGISHEKIVTPTVHGEEYVAHLYVIKTTDRDSL 302 Query: 319 SAHLRTMQVPHDIHFPVPDHRQEMFNGRFAADILPVTECACNEVLTLPCFPEMTDEEVEW 378 HL +P DIH+P+PD+RQ + F PVTE C +VLTLPCFPEMTD EV+ Sbjct: 303 KRHLSEAGIPSDIHYPIPDYRQPAYAHLFPEVSEPVTEQQCTQVLTLPCFPEMTDAEVDM 362 Query: 379 VSKHVNQWE 387 V +N W+ Sbjct: 363 VINCINTWK 371 >ref|ZP_08182369.1| nucleotide sugar aminotransferase [Xanthomonas gardneri ATCC 19865] gb|EGD20014.1| nucleotide sugar aminotransferase [Xanthomonas gardneri ATCC 19865] Length = 367 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 201/367 (54%), Positives = 260/367 (70%), Gaps = 1/367 (0%) Query: 21 MKPLKAINDLYRHNEPLEPEISKVFQNFLARGWYVLGAEVTAFEREFAAYCGTEYALGVA 80 M L +N L RH PL+ +S++ + +A G+YVLG V AFE+EFA YCG + + VA Sbjct: 1 MDALIPVNSLSRHIAPLQDTLSQIASSIIASGYYVLGPNVKAFEQEFAGYCGARHCVSVA 60 Query: 81 NGTDALELALRTAGVEAGDRVALVANAGGYGTFAVNAIGAVPVYVDVDAFSLNMDVLALE 140 NGTDALEL+L+ GV+ GD+VA+VANA YGT AV A GA PV+VD A + M V ALE Sbjct: 61 NGTDALELSLKALGVDQGDQVAVVANAAMYGTSAVLACGATPVFVDTGAGTGLMSVTALE 120 Query: 141 RALQASSI-SAIIVTHLYGRLANIEEISRLARDQGVKLIEDCAQAHGAVRDGKKAGSWGD 199 AL A + A+IVTHLYG+LA+IE I L +G+K++EDCAQAHGA R+G++AGS+GD Sbjct: 121 TALAADTTPKAVIVTHLYGQLADIEAIVALCHARGIKVVEDCAQAHGAERNGRRAGSFGD 180 Query: 200 LATFSFYPTKNLGALGDGGALTMNAPDVAERAKQLRQYGWTQKYRSTVIGGRNSRLDEVQ 259 +A+FSFYPTKNLGALGDGGA+ N +A RA QLRQYGWT KY +++ GGRNSRLDE+Q Sbjct: 181 IASFSFYPTKNLGALGDGGAIVTNDDALATRAAQLRQYGWTAKYTNSLRGGRNSRLDELQ 240 Query: 260 AAILRIKLPYLDRWNARRRAIFDLYGKLLRHPQITLPAPSGPDHVGHLYVIRCGQRDSLS 319 AA+LR L LD WN RRR I + Y + L +P+I G D+V HL+V+RC +R++L Sbjct: 241 AAMLRHMLTLLDSWNQRRRDIANRYARGLSNPKIASAGVVGADNVAHLHVVRCEEREALR 300 Query: 320 AHLRTMQVPHDIHFPVPDHRQEMFNGRFAADILPVTECACNEVLTLPCFPEMTDEEVEWV 379 AHL V D+H+P+ DHRQ G FA+ LP TE V+TLPCFPE+TDEEV+ V Sbjct: 301 AHLHAAGVQTDVHYPLCDHRQPCHEGAFASVTLPNTEADAACVMTLPCFPELTDEEVDQV 360 Query: 380 SKHVNQW 386 + N++ Sbjct: 361 IQACNRF 367 >gb|AEL05682.1| aminotransferase [Xanthomonas campestris pv. raphani 756C] Length = 367 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 199/367 (54%), Positives = 256/367 (69%), Gaps = 1/367 (0%) Query: 21 MKPLKAINDLYRHNEPLEPEISKVFQNFLARGWYVLGAEVTAFEREFAAYCGTEYALGVA 80 M L +N L RH PL+ ++S++ + +A G+YVLG V AFE+EFA YCG + + VA Sbjct: 1 MDALIPVNSLSRHIAPLQDKLSQIAGDIIASGYYVLGPNVKAFEQEFAGYCGARHCVSVA 60 Query: 81 NGTDALELALRTAGVEAGDRVALVANAGGYGTFAVNAIGAVPVYVDVDAFSLNMDVLALE 140 NGTDALEL+L+ G+ GDRVA+VANA YGT AV A GA P++VD A + M V ALE Sbjct: 61 NGTDALELSLKALGIGQGDRVAVVANAAMYGTSAVLACGATPIFVDTGAGTGLMSVAALE 120 Query: 141 RALQASSI-SAIIVTHLYGRLANIEEISRLARDQGVKLIEDCAQAHGAVRDGKKAGSWGD 199 AL + A+IVTHLYG+LA IE I L +G+K++EDCAQAHGA R+G++AGS+GD Sbjct: 121 AALAGKTTPKAVIVTHLYGQLAEIEAIVALCHARGIKVVEDCAQAHGAERNGRRAGSFGD 180 Query: 200 LATFSFYPTKNLGALGDGGALTMNAPDVAERAKQLRQYGWTQKYRSTVIGGRNSRLDEVQ 259 +A+FSFYPTKNLGALGDGGA+ +A RA QLRQYGWT KY +++ GGRNSRLDE+Q Sbjct: 181 IASFSFYPTKNLGALGDGGAIVTGDDALATRAAQLRQYGWTAKYTNSLRGGRNSRLDELQ 240 Query: 260 AAILRIKLPYLDRWNARRRAIFDLYGKLLRHPQITLPAPSGPDHVGHLYVIRCGQRDSLS 319 AA+LR L LD WN RRR I + Y + L +P+I G D+V HLYV+RC QRD+L Sbjct: 241 AAMLRHMLTSLDGWNQRRRDIANRYARGLSNPKIASAGVVGADNVAHLYVVRCDQRDALR 300 Query: 320 AHLRTMQVPHDIHFPVPDHRQEMFNGRFAADILPVTECACNEVLTLPCFPEMTDEEVEWV 379 AHL+ V ++H+P+ DHRQ G F + LP TE V+TLPCFPE+TDEEV+ V Sbjct: 301 AHLQAAGVQTEVHYPLCDHRQPCHEGAFDSVALPNTEADAICVMTLPCFPELTDEEVDQV 360 Query: 380 SKHVNQW 386 N++ Sbjct: 361 IDACNRF 367 >ref|YP_365443.1| aminotransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] emb|CAJ25443.1| aminotransferase [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 367 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 198/367 (53%), Positives = 260/367 (70%), Gaps = 1/367 (0%) Query: 21 MKPLKAINDLYRHNEPLEPEISKVFQNFLARGWYVLGAEVTAFEREFAAYCGTEYALGVA 80 M L +N L RH P++ +S++ +A G+YVLG V AFE+EFA YCG+ + + VA Sbjct: 1 MDALIPVNSLSRHIAPIQDALSQIATTIVASGYYVLGPNVKAFEQEFANYCGSRHCVSVA 60 Query: 81 NGTDALELALRTAGVEAGDRVALVANAGGYGTFAVNAIGAVPVYVDVDAFSLNMDVLALE 140 NGTDALEL+L+ GV D VA+VANA YGT AV A GA PV+VD +A + M V ALE Sbjct: 61 NGTDALELSLKALGVGPEDTVAVVANAAMYGTSAVLACGASPVFVDTEAGTGLMAVPALE 120 Query: 141 RALQAS-SISAIIVTHLYGRLANIEEISRLARDQGVKLIEDCAQAHGAVRDGKKAGSWGD 199 L + +A+IVTHLYG+LA+IE I L + +G+K++EDCAQAHGA R+G++AGS+GD Sbjct: 121 AMLAGDCAPAAVIVTHLYGQLADIEAIVALCQPRGIKVVEDCAQAHGAERNGRRAGSFGD 180 Query: 200 LATFSFYPTKNLGALGDGGALTMNAPDVAERAKQLRQYGWTQKYRSTVIGGRNSRLDEVQ 259 +A+FSFYPTKNLGALGDGGA+ N D+A RA QLRQYGWT KY +T+ GGRNSRLDE+Q Sbjct: 181 IASFSFYPTKNLGALGDGGAIVTNHDDLAIRAAQLRQYGWTAKYTNTLRGGRNSRLDELQ 240 Query: 260 AAILRIKLPYLDRWNARRRAIFDLYGKLLRHPQITLPAPSGPDHVGHLYVIRCGQRDSLS 319 AA+LR LP LD WN RRR I + Y + L +P+I + G D+V HLYV+RC R+ L Sbjct: 241 AAMLRHMLPLLDGWNQRRRDIANRYAQGLSNPRIEVCGVVGADNVAHLYVVRCDDREQLR 300 Query: 320 AHLRTMQVPHDIHFPVPDHRQEMFNGRFAADILPVTECACNEVLTLPCFPEMTDEEVEWV 379 +HL++ V +IH+P+ DHRQ G F + +LP TE V TLPCFPE+TDEE++ V Sbjct: 301 SHLQSAGVQTEIHYPLCDHRQPCHEGAFDSVVLPNTEADAVRVTTLPCFPELTDEEIDRV 360 Query: 380 SKHVNQW 386 + N++ Sbjct: 361 VEACNRF 367 >ref|NP_636009.1| aminotransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] ref|YP_244679.1| aminotransferase [Xanthomonas campestris pv. campestris str. 8004] gb|AAM39933.1| aminotransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAY50659.1| aminotransferase [Xanthomonas campestris pv. campestris str. 8004] Length = 367 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 199/367 (54%), Positives = 256/367 (69%), Gaps = 1/367 (0%) Query: 21 MKPLKAINDLYRHNEPLEPEISKVFQNFLARGWYVLGAEVTAFEREFAAYCGTEYALGVA 80 M L +N L RH PL+ ++S++ + +A G+YVLG V AFE+EFA YCG + + VA Sbjct: 1 MDALIPVNSLSRHIAPLQDKLSQIAGDIIASGYYVLGPNVKAFEQEFAGYCGARHCVSVA 60 Query: 81 NGTDALELALRTAGVEAGDRVALVANAGGYGTFAVNAIGAVPVYVDVDAFSLNMDVLALE 140 NGTDALEL+L+ G+ GDRVA+VANA YGT AV A GA P++VD A + M V ALE Sbjct: 61 NGTDALELSLKALGIGQGDRVAVVANAAMYGTSAVLACGAAPIFVDTGAGTGLMSVAALE 120 Query: 141 RALQASSI-SAIIVTHLYGRLANIEEISRLARDQGVKLIEDCAQAHGAVRDGKKAGSWGD 199 AL + A+IVTHLYG+LA IE I L +G+K++EDCAQAHGA R+G++AGS+GD Sbjct: 121 AALAGKTTPKAVIVTHLYGQLAEIEAIVALCHARGIKVVEDCAQAHGAERNGRRAGSFGD 180 Query: 200 LATFSFYPTKNLGALGDGGALTMNAPDVAERAKQLRQYGWTQKYRSTVIGGRNSRLDEVQ 259 +A+FSFYPTKNLGALGDGGA+ +A RA QLRQYGWT KY +++ GGRNSRLDE+Q Sbjct: 181 IASFSFYPTKNLGALGDGGAIVTGDDALATRAAQLRQYGWTAKYTNSLRGGRNSRLDELQ 240 Query: 260 AAILRIKLPYLDRWNARRRAIFDLYGKLLRHPQITLPAPSGPDHVGHLYVIRCGQRDSLS 319 AA+LR L LD WN RRR I + Y + L +P+I G D+V HLYV+RC QRD+L Sbjct: 241 AAMLRHMLTSLDGWNQRRRDIANRYARGLSNPKIASAGVVGADNVAHLYVVRCDQRDALR 300 Query: 320 AHLRTMQVPHDIHFPVPDHRQEMFNGRFAADILPVTECACNEVLTLPCFPEMTDEEVEWV 379 AHL+ V ++H+P+ DHRQ G F + LP TE V+TLPCFPE+TDEEV+ V Sbjct: 301 AHLQAAGVQTEVHYPLCDHRQPCHEGAFDSVALPNTEADAICVMTLPCFPELTDEEVDQV 360 Query: 380 SKHVNQW 386 N++ Sbjct: 361 IDACNRF 367