BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2174.p (242 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775208.1| branched-chain amino acid ABC transporter AT... 451 e-125 ref|ZP_08273443.1| Branched-chain amino acid transport ATP-bindi... 406 e-111 ref|YP_004752463.1| putative ABC transporter [Collimonas fungivo... 405 e-111 ref|YP_001155142.1| ABC transporter related [Polynucleobacter ne... 395 e-108 ref|ZP_06684870.1| branched-chain amino acid ABC superfamily ATP... 379 e-103 >ref|YP_003775208.1| branched-chain amino acid ABC transporter ATPase [Herbaspirillum seropedicae SmR1] gb|ADJ63300.1| ABC-type branched-chain amino acid transport system, ATPase component protein [Herbaspirillum seropedicae SmR1] Length = 242 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 238/242 (98%), Positives = 242/242 (100%) Query: 1 MLTISNLHAAYGKVEVLHGISMDVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGEVTL 60 MLTISNLHAAYGKVEVLHGISM+VPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGEVTL Sbjct: 1 MLTISNLHAAYGKVEVLHGISMEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGEVTL 60 Query: 61 GGKNITGLDSHRIARYGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 GGKNITGLDSH+IAR+GLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER Sbjct: 61 GGKNITGLDSHKIARFGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAMARAVMLNPEVILLDEPSMGLAPILVDEVFRI 180 ALELFPRLKERQ+QLAGTLSGGEQQMLAMARAVMLNPEVILLDEPSMGLAPILVDEVFRI Sbjct: 121 ALELFPRLKERQSQLAGTLSGGEQQMLAMARAVMLNPEVILLDEPSMGLAPILVDEVFRI 180 Query: 181 IVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVKAAYLGGGA 240 IVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVKAAYLGGGA Sbjct: 181 IVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVKAAYLGGGA 240 Query: 241 HH 242 HH Sbjct: 241 HH 242 >ref|ZP_08273443.1| Branched-chain amino acid transport ATP-binding protein livF [Oxalobacteraceae bacterium IMCC9480] gb|EGF33106.1| Branched-chain amino acid transport ATP-binding protein livF [Oxalobacteraceae bacterium IMCC9480] Length = 242 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 212/242 (87%), Positives = 230/242 (95%) Query: 1 MLTISNLHAAYGKVEVLHGISMDVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGEVTL 60 ML ISNLHAAYGKVEVLHGIS++VPKGKVVTLIGSNGAGKTTTMRAISGMIKPK G V L Sbjct: 1 MLIISNLHAAYGKVEVLHGISLEVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKSGSVML 60 Query: 61 GGKNITGLDSHRIARYGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 GK++TGL+SHRIAR GLAHSPEGRRVF+TMS+TDNLLLGAFPR+T ARP+GDI DLE+ Sbjct: 61 AGKDVTGLESHRIARAGLAHSPEGRRVFSTMSITDNLLLGAFPRYTGARPRGDIKEDLEK 120 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAMARAVMLNPEVILLDEPSMGLAPILVDEVFRI 180 ALELFPRLKERQ QLAGTLSGGEQQMLAMARAVMLNPEVILLDEPSMGLAPILV+EVFRI Sbjct: 121 ALELFPRLKERQHQLAGTLSGGEQQMLAMARAVMLNPEVILLDEPSMGLAPILVEEVFRI 180 Query: 181 IVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVKAAYLGGGA 240 I+RLKE+GVTMLLVEQFAAAALNVADYGYV+ENG+ISVHGPA+KL+NDPAV+AAYLGGG Sbjct: 181 ILRLKERGVTMLLVEQFAAAALNVADYGYVMENGRISVHGPANKLKNDPAVQAAYLGGGQ 240 Query: 241 HH 242 H Sbjct: 241 QH 242 >ref|YP_004752463.1| putative ABC transporter [Collimonas fungivorans Ter331] gb|AEK61640.1| putative ABC transporter [Collimonas fungivorans Ter331] Length = 262 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 214/241 (88%), Positives = 229/241 (95%) Query: 1 MLTISNLHAAYGKVEVLHGISMDVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGEVTL 60 ML+ISNLHAAYGKVEVLHGIS++VPKGKVVTLIGSNGAGKTTTMRAISGMIK K G VTL Sbjct: 22 MLSISNLHAAYGKVEVLHGISLEVPKGKVVTLIGSNGAGKTTTMRAISGMIKAKAGSVTL 81 Query: 61 GGKNITGLDSHRIARYGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 G ++TGL SH+IAR GLAHSPEGRRVFATMSV DNLLLGAFPRFTR RP+GDI HDLE+ Sbjct: 82 AGVDVTGLASHKIARAGLAHSPEGRRVFATMSVVDNLLLGAFPRFTRLRPRGDIKHDLEQ 141 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAMARAVMLNPEVILLDEPSMGLAPILVDEVFRI 180 ALELFPRLKER++QLAGTLSGGEQQMLAMARA+MLNPEVILLDEPSMGLAPILV+EVFRI Sbjct: 142 ALELFPRLKERRSQLAGTLSGGEQQMLAMARAIMLNPEVILLDEPSMGLAPILVEEVFRI 201 Query: 181 IVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVKAAYLGGGA 240 I RLKEQGVTMLLVEQFAAAALNVADYGYVLENG+ISVHGPA+KL+NDPAVKAAYLGGG Sbjct: 202 ISRLKEQGVTMLLVEQFAAAALNVADYGYVLENGRISVHGPAEKLKNDPAVKAAYLGGGQ 261 Query: 241 H 241 H Sbjct: 262 H 262 >ref|YP_001155142.1| ABC transporter related [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP33578.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 242 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 204/242 (84%), Positives = 222/242 (91%) Query: 1 MLTISNLHAAYGKVEVLHGISMDVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGEVTL 60 ML+I NL A YGKV+VLHGIS+DVPKG+V+TLIGSNGAGKTTTMRAI+GMIKP GGEVTL Sbjct: 1 MLSIKNLEAGYGKVKVLHGISIDVPKGQVITLIGSNGAGKTTTMRAITGMIKPTGGEVTL 60 Query: 61 GGKNITGLDSHRIARYGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 G+ I G DSH+IAR GLAHSPEGRRVF TMSVTDNLLLGAFPRFT +RPKGDI HDLE+ Sbjct: 61 SGEKINGYDSHKIARLGLAHSPEGRRVFTTMSVTDNLLLGAFPRFTGSRPKGDIKHDLEK 120 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAMARAVMLNPEVILLDEPSMGLAPILVDEVFRI 180 ALE+FPRLKERQ QLAGTLSGGEQQMLAMARAVMLNPE+ILLDEPSMGLAPILV+EVF+I Sbjct: 121 ALEMFPRLKERQYQLAGTLSGGEQQMLAMARAVMLNPEIILLDEPSMGLAPILVEEVFKI 180 Query: 181 IVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVKAAYLGGGA 240 I LK QGVTMLLVEQFAAAALNVADYGYVLENGKI+ HGPA KL++DPAVKAAYLGG + Sbjct: 181 ISNLKSQGVTMLLVEQFAAAALNVADYGYVLENGKIATHGPASKLKDDPAVKAAYLGGAS 240 Query: 241 HH 242 H Sbjct: 241 SH 242 >ref|ZP_06684870.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gb|EFF78221.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 241 Score = 379 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 200/241 (82%), Positives = 220/241 (91%) Query: 1 MLTISNLHAAYGKVEVLHGISMDVPKGKVVTLIGSNGAGKTTTMRAISGMIKPKGGEVTL 60 ML+I NL A YGKV+VLHGISM+VPK KVVTLIGSNGAGKTTTMRA+SGMI+P GEVTL Sbjct: 1 MLSIKNLEAGYGKVKVLHGISMEVPKAKVVTLIGSNGAGKTTTMRALSGMIRPTAGEVTL 60 Query: 61 GGKNITGLDSHRIARYGLAHSPEGRRVFATMSVTDNLLLGAFPRFTRARPKGDIAHDLER 120 GGK I GL+SHRIAR GLAHSPEGRRVF T+SVTDNLLLGAFPR T +RPKGD+ DL R Sbjct: 61 GGKRIDGLESHRIARLGLAHSPEGRRVFPTLSVTDNLLLGAFPRLTGSRPKGDVQADLGR 120 Query: 121 ALELFPRLKERQTQLAGTLSGGEQQMLAMARAVMLNPEVILLDEPSMGLAPILVDEVFRI 180 A++LFPRLKER+ QLAGTLSGGEQQMLAMARAVMLNPE++LLDEPSMGLAPILV+EVFRI Sbjct: 121 AMDLFPRLKERRDQLAGTLSGGEQQMLAMARAVMLNPELVLLDEPSMGLAPILVEEVFRI 180 Query: 181 IVRLKEQGVTMLLVEQFAAAALNVADYGYVLENGKISVHGPADKLQNDPAVKAAYLGGGA 240 I RLK++GVTMLLVEQFAAAAL VADYGYVLENG+ISVHG ADKL++DPAV AAYLGGG Sbjct: 181 IARLKDEGVTMLLVEQFAAAALQVADYGYVLENGRISVHGSADKLRDDPAVVAAYLGGGG 240 Query: 241 H 241 H Sbjct: 241 H 241