BLASTP 2.2.17 [Aug-26-2007]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= 0001.2167.p         (104 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775201.1| transmembrane protein [Herbaspirillum serope...   144   3e-33
ref|YP_001100092.1| hypothetical protein HEAR1812 [Herminiimonas...   115   2e-24
ref|YP_001353166.1| hypothetical protein mma_1476 [Janthinobacte...   114   7e-24
ref|YP_004752260.1| hypothetical protein CFU_1605 [Collimonas fu...   111   4e-23
ref|ZP_08274722.1| putative transmembrane protein [Oxalobacterac...   103   6e-21

>ref|YP_003775201.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ63293.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 104

 Score =  144 bits (364), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 86/104 (82%), Positives = 97/104 (93%)

Query: 1   MNVSLFSWIMILLAALAANLPFFNQQLFGLIPLNKDAAWVKPIWLRLLELVVLYFLVGVA 60
           MN+SLFSW++ILLAALAANLPF NQQLF LIPL KD AWVKP+WLRL+EL+VLYF+VG+ 
Sbjct: 1   MNISLFSWVVILLAALAANLPFLNQQLFALIPLKKDPAWVKPVWLRLVELLVLYFVVGIV 60

Query: 61  AHLLESGIGNVFSQGWEFYAITACLFLVLAYPGYVMRYLRKQHA 104
           AHLLE+G+GNVFSQGWEFYAIT CLFLVLAYPGYVMRYLRK +A
Sbjct: 61  AHLLEAGVGNVFSQGWEFYAITGCLFLVLAYPGYVMRYLRKSNA 104


>ref|YP_001100092.1| hypothetical protein HEAR1812 [Herminiimonas arsenicoxydans]
 emb|CAL61967.1| Conserved hypothetical protein, putative membrane protein
           [Herminiimonas arsenicoxydans]
          Length = 101

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 67/103 (65%), Positives = 80/103 (77%), Gaps = 3/103 (2%)

Query: 1   MNVSLFSWIMILLAALAANLPFFNQQLFGLIPLNKDAAWVKPIWLRLLELVVLYFLVGVA 60
           M+VSL SW +ILLA   ANLPFFN++L  +IP  +    VKP+WLRL+EL +LY  VG+ 
Sbjct: 1   MDVSLASWFVILLALFCANLPFFNERLLAVIPFPRP---VKPVWLRLIELFLLYLAVGLV 57

Query: 61  AHLLESGIGNVFSQGWEFYAITACLFLVLAYPGYVMRYLRKQH 103
           A LLE  IG+VF QGWEFYAIT CLFLVLAYPG+VMRY+RK H
Sbjct: 58  AGLLELRIGSVFPQGWEFYAITGCLFLVLAYPGFVMRYMRKHH 100


>ref|YP_001353166.1| hypothetical protein mma_1476 [Janthinobacterium sp. Marseille]
 gb|ABR88615.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 92

 Score =  114 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 62/94 (65%), Positives = 79/94 (84%), Gaps = 3/94 (3%)

Query: 10  MILLAALAANLPFFNQQLFGLIPLNKDAAWVKPIWLRLLELVVLYFLVGVAAHLLESGIG 69
           MILLA  +ANLPFFN++LF ++PL+  +   KP+WLRL+EL VLY LVG+ A +LES IG
Sbjct: 1   MILLALFSANLPFFNERLFAVLPLSSTS---KPVWLRLIELFVLYLLVGLIARMLESRIG 57

Query: 70  NVFSQGWEFYAITACLFLVLAYPGYVMRYLRKQH 103
           +VF QGWEF+AIT CLF+VLAYPG+VMRY+RK+H
Sbjct: 58  SVFPQGWEFFAITGCLFIVLAYPGFVMRYMRKRH 91


>ref|YP_004752260.1| hypothetical protein CFU_1605 [Collimonas fungivorans Ter331]
 gb|AEK61437.1| hypothetical protein CFU_1605 [Collimonas fungivorans Ter331]
          Length = 104

 Score =  111 bits (277), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 69/103 (66%), Positives = 83/103 (80%), Gaps = 1/103 (0%)

Query: 1   MNVSLFSWIMILLAALAANLPFFNQQLFGLIPLNKDA-AWVKPIWLRLLELVVLYFLVGV 59
           MNVSL SW +ILLA LAANLPF N++LF L+PL     A VKP+W+RLLEL  LY LVG+
Sbjct: 1   MNVSLSSWFVILLALLAANLPFINERLFALVPLKSGGQAAVKPVWVRLLELFALYALVGL 60

Query: 60  AAHLLESGIGNVFSQGWEFYAITACLFLVLAYPGYVMRYLRKQ 102
            A++LE+ IGN F QGWEFYA+T C+FLVLAYPGYV+RYL+K 
Sbjct: 61  FAYVLEANIGNTFRQGWEFYAVTGCMFLVLAYPGYVLRYLKKH 103


>ref|ZP_08274722.1| putative transmembrane protein [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31796.1| putative transmembrane protein [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 107

 Score =  103 bits (258), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 58/105 (55%), Positives = 78/105 (74%), Gaps = 1/105 (0%)

Query: 1   MNVSLFSWIMILLAALAANLPFFNQQLFGLIPLNKDAAWV-KPIWLRLLELVVLYFLVGV 59
           M++SL SW +++LA  AAN PF  ++LFG+I L+  AA   K +W RLLEL+VLYF+VG 
Sbjct: 1   MDISLASWFVVILAFAAANFPFLTERLFGIIALSPKAAPTDKSMWWRLLELLVLYFVVGF 60

Query: 60  AAHLLESGIGNVFSQGWEFYAITACLFLVLAYPGYVMRYLRKQHA 104
           A  L+E   G+VF+Q WEFYAI A  F+VLAYPG+  RYLRK+++
Sbjct: 61  AGRLIEGRTGDVFTQTWEFYAIAAVAFIVLAYPGFAYRYLRKRNS 105