BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2157.p (163 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775191.1| NADH dehydrogenase I subunit E [Herbaspirill... 318 1e-85 ref|YP_001100102.1| NADH dehydrogenase subunit E [Herminiimonas ... 278 2e-73 ref|YP_004752250.1| NADH-ubiquinone oxidoreductase subunit E [Co... 274 3e-72 ref|YP_001353156.1| NADH dehydrogenase subunit E [Janthinobacter... 257 4e-67 ref|ZP_08276196.1| NADH-ubiquinone oxidoreductase chain E [Oxalo... 255 1e-66 >ref|YP_003775191.1| NADH dehydrogenase I subunit E [Herbaspirillum seropedicae SmR1] gb|ADJ63283.1| NADH dehydrogenase I (Chain E) oxidoreductase protein [Herbaspirillum seropedicae SmR1] Length = 159 Score = 318 bits (816), Expect = 1e-85, Method: Composition-based stats. Identities = 158/159 (99%), Positives = 158/159 (99%) Query: 5 MLLSQEALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64 MLLSQEALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV Sbjct: 1 MLLSQEALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 60 Query: 65 QEVATFYNMFNTSPVGKHKITVCTNLPCLLSGGERAAHHLKHKLGIDYRETTADGQFTLM 124 QEVATFYNMFNTSPVGKHKITVCTNLPCLLSGGERAAHHLK KLGIDYRETTADGQFTLM Sbjct: 61 QEVATFYNMFNTSPVGKHKITVCTNLPCLLSGGERAAHHLKQKLGIDYRETTADGQFTLM 120 Query: 125 EGECMGACGDAPVMLVNNHQMCSWMSNEKIDALLEELKK 163 EGECMGACGDAPVMLVNNHQMCSWMSNEKIDALLEELKK Sbjct: 121 EGECMGACGDAPVMLVNNHQMCSWMSNEKIDALLEELKK 159 >ref|YP_001100102.1| NADH dehydrogenase subunit E [Herminiimonas arsenicoxydans] emb|CAL61977.1| NADH-quinone oxidoreductase subunit E (NADH dehydrogenase I subunit E) (NDH-1 subunit E) [Herminiimonas arsenicoxydans] Length = 159 Score = 278 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 130/159 (81%), Positives = 151/159 (94%) Query: 5 MLLSQEALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64 MLLS++A KKIDRE+AK+PADQ+QSAVM+AL IAQ E GWLP E+ QE+ADY+GMPA+AV Sbjct: 1 MLLSEQAYKKIDREIAKFPADQKQSAVMAALAIAQDETGWLPPEVMQEVADYLGMPAIAV 60 Query: 65 QEVATFYNMFNTSPVGKHKITVCTNLPCLLSGGERAAHHLKHKLGIDYRETTADGQFTLM 124 QEVATFYNM++T PVGKHKI+VCTNLPCLLSGGERAAH+LKHKLGIDYRETTADGQFTL+ Sbjct: 61 QEVATFYNMYDTKPVGKHKISVCTNLPCLLSGGERAAHYLKHKLGIDYRETTADGQFTLI 120 Query: 125 EGECMGACGDAPVMLVNNHQMCSWMSNEKIDALLEELKK 163 EGECMGACGDAPVM+VNN +MCS+MS++KIDAL+EELKK Sbjct: 121 EGECMGACGDAPVMIVNNKRMCSFMSDDKIDALVEELKK 159 >ref|YP_004752250.1| NADH-ubiquinone oxidoreductase subunit E [Collimonas fungivorans Ter331] gb|AEK61427.1| NADH-ubiquinone oxidoreductase chain E [Collimonas fungivorans Ter331] Length = 167 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 129/163 (79%), Positives = 147/163 (90%) Query: 1 MANDMLLSQEALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMP 60 MANDMLLSQ+ KKIDRE+AK+PADQ+QSAVM+AL IAQ E GWL E Q++ADY+GMP Sbjct: 1 MANDMLLSQDTYKKIDREVAKFPADQKQSAVMAALAIAQDEKGWLAPETMQDVADYLGMP 60 Query: 61 AVAVQEVATFYNMFNTSPVGKHKITVCTNLPCLLSGGERAAHHLKHKLGIDYRETTADGQ 120 A+AVQEVATFYNM+NT PVGKHKI++CTNLPC LSGGERAA HLKHKLGID+RETTADG Sbjct: 61 AIAVQEVATFYNMYNTKPVGKHKISICTNLPCQLSGGERAAEHLKHKLGIDFRETTADGL 120 Query: 121 FTLMEGECMGACGDAPVMLVNNHQMCSWMSNEKIDALLEELKK 163 FTL+EGECMGACGDAPV+LVNN +MCSWMSNEKID LL+EL + Sbjct: 121 FTLVEGECMGACGDAPVLLVNNKRMCSWMSNEKIDGLLQELSE 163 >ref|YP_001353156.1| NADH dehydrogenase subunit E [Janthinobacterium sp. Marseille] gb|ABR88614.1| NADH dehydrogenase I chain E [Janthinobacterium sp. Marseille] Length = 159 Score = 257 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 121/159 (76%), Positives = 143/159 (89%) Query: 5 MLLSQEALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64 MLLS++ K+IDRE+AK+P DQ+QSAVM+AL+IAQ E WLP E+ Q++ADY+GMPA+AV Sbjct: 1 MLLSEQTYKRIDREVAKFPPDQKQSAVMAALQIAQDETRWLPPEVMQDVADYLGMPAIAV 60 Query: 65 QEVATFYNMFNTSPVGKHKITVCTNLPCLLSGGERAAHHLKHKLGIDYRETTADGQFTLM 124 QEVATFYNM+NT PVGK KI+VCTNLPC LSGGE+AAH+LK KLGIDYRETT D FTL+ Sbjct: 61 QEVATFYNMYNTKPVGKFKISVCTNLPCQLSGGEKAAHYLKQKLGIDYRETTDDDLFTLV 120 Query: 125 EGECMGACGDAPVMLVNNHQMCSWMSNEKIDALLEELKK 163 EGECMGACGDAPVMLVNN +MCS+MS+EKIDAL+EELKK Sbjct: 121 EGECMGACGDAPVMLVNNKRMCSFMSDEKIDALVEELKK 159 >ref|ZP_08276196.1| NADH-ubiquinone oxidoreductase chain E [Oxalobacteraceae bacterium IMCC9480] gb|EGF30335.1| NADH-ubiquinone oxidoreductase chain E [Oxalobacteraceae bacterium IMCC9480] Length = 159 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 124/159 (77%), Positives = 137/159 (86%) Query: 5 MLLSQEALKKIDRELAKYPADQRQSAVMSALRIAQVEHGWLPAELQQEIADYIGMPAVAV 64 MLLS+ A KKIDRE++K+PADQ+QSAVM AL IAQ E GWL L QEIADY+GM +AV Sbjct: 1 MLLSELAYKKIDREVSKFPADQKQSAVMGALAIAQDEAGWLSPPLMQEIADYLGMAPIAV 60 Query: 65 QEVATFYNMFNTSPVGKHKITVCTNLPCLLSGGERAAHHLKHKLGIDYRETTADGQFTLM 124 QEVA FY M+NTSP GK KITVCTNLPC LSGGE+AA +LK KLGIDYRETTADGQFTL Sbjct: 61 QEVAAFYEMYNTSPTGKFKITVCTNLPCALSGGEKAARYLKQKLGIDYRETTADGQFTLR 120 Query: 125 EGECMGACGDAPVMLVNNHQMCSWMSNEKIDALLEELKK 163 EGECMGACGDAPVMLVNN +MCSWMSN+KID L+EELKK Sbjct: 121 EGECMGACGDAPVMLVNNKRMCSWMSNDKIDDLVEELKK 159