BLASTP 2.2.17 [Aug-26-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= 0001.2149.p (190 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775184.1| hypothetical protein Hsero_1763 [Herbaspiril... 306 1e-81 ref|YP_440789.1| hypothetical protein BTH_I0231 [Burkholderia th... 264 5e-69 ref|ZP_02361272.1| hypothetical protein BoklC_01059 [Burkholderi... 263 1e-68 ref|YP_106887.1| hypothetical protein BPSL0260 [Burkholderia pse... 262 2e-68 ref|ZP_02461975.1| hypothetical protein Bpse38_01294 [Burkholder... 261 3e-68 >ref|YP_003775184.1| hypothetical protein Hsero_1763 [Herbaspirillum seropedicae SmR1] gb|ADJ63276.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 170 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 168/169 (99%), Positives = 168/169 (99%) Query: 22 APRPTKIVSSQHLVSERSAELSELEYALIMASNAFNRWMVRCMAAAGAKDMTAIEVSLLH 81 APRPTKIVSSQHLVSERSAELSELEYALIMASNAFNRWMVRCMAAAGAKDMTAIEVSLLH Sbjct: 2 APRPTKIVSSQHLVSERSAELSELEYALIMASNAFNRWMVRCMAAAGAKDMTAIEVSLLH 61 Query: 82 HVNHRDRKKKLADICFVLNVEDTHVVTYALKKLVKAGYVKSEKAGKELLFSTTPAGQALC 141 HVNHRDRKKKLADICFVLNVEDTHVVTYALKKLVKAGYVKSEKAGKELLFSTTPAGQALC Sbjct: 62 HVNHRDRKKKLADICFVLNVEDTHVVTYALKKLVKAGYVKSEKAGKELLFSTTPAGQALC 121 Query: 142 MKYREVRERCLIEVQVESGIPNQAIGEAAQLLRNASGLYDTAARAAASL 190 MKYREVRERCLIEVQ ESGIPNQAIGEAAQLLRNASGLYDTAARAAASL Sbjct: 122 MKYREVRERCLIEVQAESGIPNQAIGEAAQLLRNASGLYDTAARAAASL 170 >ref|YP_440789.1| hypothetical protein BTH_I0231 [Burkholderia thailandensis E264] ref|ZP_02372349.1| hypothetical protein BthaT_15104 [Burkholderia thailandensis TXDOH] ref|ZP_02386203.1| hypothetical protein BthaB_14784 [Burkholderia thailandensis Bt4] ref|ZP_05588822.1| hypothetical protein BthaA_15330 [Burkholderia thailandensis E264] gb|ABC38040.1| conserved hypothetical protein [Burkholderia thailandensis E264] Length = 170 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 140/169 (82%), Positives = 153/169 (90%), Gaps = 1/169 (0%) Query: 23 PR-PTKIVSSQHLVSERSAELSELEYALIMASNAFNRWMVRCMAAAGAKDMTAIEVSLLH 81 PR PTKIVSS+HLVSE SAELSELEYALIMA NAFNRWMVRCMAAAGAKDMTA+EVSLLH Sbjct: 2 PRHPTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMAAAGAKDMTAVEVSLLH 61 Query: 82 HVNHRDRKKKLADICFVLNVEDTHVVTYALKKLVKAGYVKSEKAGKELLFSTTPAGQALC 141 HV+HRDRKKKLADICFVLN+EDTHV TYALKKLV GYVKSEK GKE+ F T AG+ALC Sbjct: 62 HVSHRDRKKKLADICFVLNIEDTHVATYALKKLVARGYVKSEKTGKEVFFDATDAGRALC 121 Query: 142 MKYREVRERCLIEVQVESGIPNQAIGEAAQLLRNASGLYDTAARAAASL 190 +KYR+VRERCLIE +SG+ N+ IG+AAQLLR+ASGLYDTAARAAASL Sbjct: 122 LKYRDVRERCLIETLKDSGLTNEQIGDAAQLLRHASGLYDTAARAAASL 170 >ref|ZP_02361272.1| hypothetical protein BoklC_01059 [Burkholderia oklahomensis C6786] Length = 170 Score = 263 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 138/166 (83%), Positives = 151/166 (90%) Query: 25 PTKIVSSQHLVSERSAELSELEYALIMASNAFNRWMVRCMAAAGAKDMTAIEVSLLHHVN 84 PTKIVSS+HLVSE SAELSELEYALIMA NAFNRWMVRCMAAAGAKDMTA+EVSLLHHV+ Sbjct: 5 PTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMAAAGAKDMTAVEVSLLHHVS 64 Query: 85 HRDRKKKLADICFVLNVEDTHVVTYALKKLVKAGYVKSEKAGKELLFSTTPAGQALCMKY 144 HRDRKKKLADICFVLN+EDTHV TYALKKLV GYVKSEK GKE+ F T AG+ALC+KY Sbjct: 65 HRDRKKKLADICFVLNIEDTHVATYALKKLVARGYVKSEKTGKEVFFDATDAGRALCLKY 124 Query: 145 REVRERCLIEVQVESGIPNQAIGEAAQLLRNASGLYDTAARAAASL 190 R+VRERCLIE +SG+ N+ IG+AAQLLR+ASGLYDTAARAAASL Sbjct: 125 RDVRERCLIETLKDSGLTNEQIGDAAQLLRHASGLYDTAARAAASL 170 >ref|YP_106887.1| hypothetical protein BPSL0260 [Burkholderia pseudomallei K96243] ref|YP_104782.1| hypothetical protein BMA3312 [Burkholderia mallei ATCC 23344] ref|ZP_00440303.1| transcriptional regulator, MarR family [Burkholderia mallei GB8 horse 4] ref|YP_994276.1| hypothetical protein BMASAVP1_A2982 [Burkholderia mallei SAVP1] ref|YP_001028074.1| hypothetical protein BMA10229_A2110 [Burkholderia mallei NCTC 10229] ref|YP_001057308.1| hypothetical protein BURPS668_0255 [Burkholderia pseudomallei 668] ref|YP_001082882.1| hypothetical protein BMA10247_3366 [Burkholderia mallei NCTC 10247] ref|YP_001064550.1| hypothetical protein BURPS1106A_0267 [Burkholderia pseudomallei 1106a] ref|ZP_02267313.1| transcriptional regulator, MarR family [Burkholderia mallei PRL-20] ref|ZP_02400878.1| hypothetical protein BpseD_01406 [Burkholderia pseudomallei DM98] ref|ZP_02409457.1| hypothetical protein Bpse14_01394 [Burkholderia pseudomallei 14] ref|ZP_02445462.1| hypothetical protein Bpse9_01506 [Burkholderia pseudomallei 91] ref|ZP_02453772.1| hypothetical protein Bpseu9_01404 [Burkholderia pseudomallei 9] ref|ZP_02479794.1| hypothetical protein Bpse7_01429 [Burkholderia pseudomallei 7894] ref|ZP_02504238.1| hypothetical protein BpseBC_01269 [Burkholderia pseudomallei BCC215] ref|ZP_03456385.1| transcriptional regulator, MarR family [Burkholderia pseudomallei 576] ref|ZP_03795345.1| transcriptional regulator, MarR family [Burkholderia pseudomallei Pakistan 9] ref|ZP_04813816.1| transcriptional regulator, MarR family [Burkholderia pseudomallei 1106b] ref|ZP_04881379.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] ref|ZP_04888749.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] ref|ZP_04908248.1| transcriptional regulator, MarR family [Burkholderia mallei FMH] ref|ZP_04913568.1| transcriptional regulator, MarR family [Burkholderia mallei JHU] ref|ZP_04975991.1| transcriptional regulator, MarR family [Burkholderia mallei 2002721280] emb|CAH34248.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gb|AAU48566.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344] gb|ABM52458.1| conserved hypothetical protein [Burkholderia mallei SAVP1] gb|ABN02761.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229] gb|ABN85248.1| conserved hypothetical protein [Burkholderia pseudomallei 668] gb|ABN91936.1| transcriptional regulator, MarR family [Burkholderia pseudomallei 1106a] gb|ABO04471.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247] gb|EDK54854.1| transcriptional regulator, MarR family [Burkholderia mallei FMH] gb|EDK59825.1| transcriptional regulator, MarR family [Burkholderia mallei JHU] gb|EDK86866.1| transcriptional regulator, MarR family [Burkholderia mallei 2002721280] gb|EDP85733.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399] gb|EDU09733.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] gb|EEC31935.1| transcriptional regulator, MarR family [Burkholderia pseudomallei 576] gb|EEH24181.1| transcriptional regulator, MarR family [Burkholderia pseudomallei Pakistan 9] gb|EEP85918.1| transcriptional regulator, MarR family [Burkholderia mallei GB8 horse 4] gb|EES24441.1| transcriptional regulator, MarR family [Burkholderia pseudomallei 1106b] gb|EES44909.1| transcriptional regulator, MarR family [Burkholderia mallei PRL-20] Length = 170 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 137/166 (82%), Positives = 151/166 (90%) Query: 25 PTKIVSSQHLVSERSAELSELEYALIMASNAFNRWMVRCMAAAGAKDMTAIEVSLLHHVN 84 PTKIVSS+HLVSE SAELSELEYALIMA NAFNRWMVRCMAAAGAKDMTA+EVSLLHHV+ Sbjct: 5 PTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMAAAGAKDMTAVEVSLLHHVS 64 Query: 85 HRDRKKKLADICFVLNVEDTHVVTYALKKLVKAGYVKSEKAGKELLFSTTPAGQALCMKY 144 HRDRKKKLADICFVLN+EDTHV TYALKKLV GYVKSEK GKE+ F T AG+ALC++Y Sbjct: 65 HRDRKKKLADICFVLNIEDTHVATYALKKLVARGYVKSEKTGKEVFFDATDAGRALCLRY 124 Query: 145 REVRERCLIEVQVESGIPNQAIGEAAQLLRNASGLYDTAARAAASL 190 R+VRERCLIE +SG+ N+ IG+AAQLLR+ASGLYDTAARAAASL Sbjct: 125 RDVRERCLIETLKDSGLTNEQIGDAAQLLRHASGLYDTAARAAASL 170 >ref|ZP_02461975.1| hypothetical protein Bpse38_01294 [Burkholderia thailandensis MSMB43] Length = 170 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 138/166 (83%), Positives = 151/166 (90%) Query: 25 PTKIVSSQHLVSERSAELSELEYALIMASNAFNRWMVRCMAAAGAKDMTAIEVSLLHHVN 84 PTKIVSS+HLVSE SAELSELEYALIMA NAFNRWMVRCMAAAGAKDMTA+EVSLLHHV+ Sbjct: 5 PTKIVSSEHLVSETSAELSELEYALIMAGNAFNRWMVRCMAAAGAKDMTAVEVSLLHHVS 64 Query: 85 HRDRKKKLADICFVLNVEDTHVVTYALKKLVKAGYVKSEKAGKELLFSTTPAGQALCMKY 144 HRDRKKKLADICFVLN+EDTHV TYALKKLV GYVKSEK GKE+ F T AG+ALC+KY Sbjct: 65 HRDRKKKLADICFVLNIEDTHVATYALKKLVARGYVKSEKTGKEVFFEATDAGRALCLKY 124 Query: 145 REVRERCLIEVQVESGIPNQAIGEAAQLLRNASGLYDTAARAAASL 190 R+VRERCLIE +SG+ N+ IG+AAQLLR+ASGLYDTAARAAASL Sbjct: 125 RDVRERCLIETLKDSGLTNEQIGDAAQLLRHASGLYDTAARAAASL 170